RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C NPP2P39997 493 aa2.94□□□□□ -1.94
DNL4YOR005C BNA1P47096 177 aa2.94□□□□□ -1.94
DNL4YOR005C MTC3P53077 123 aa2.94□□□□□ -1.94
DNL4YOR005C MEP3P53390 489 aa2.94□□□□□ -1.94
DNL4YOR005C GTR1Q00582 310 aa2.94□□□□□ -1.94
DNL4YOR005C MDM38Q08179 573 aa2.94□□□□□ -1.94
DNL4YOR005C RPS21BQ3E754 87 aaKnown RBP2.94□□□□□ -1.94
DNL4YOR005C YRF1-1P0CX20 1796 aa2.94□□□□□ -1.94
DNL4YOR005C YRF1-5P0CX21 1796 aa2.94□□□□□ -1.94
DNL4YOR005C YRF1-8P0CX22 1796 aa2.94□□□□□ -1.94
DNL4YOR005C TY1B-NL2Q99337 1749 aaKnown RBP2.94□□□□□ -1.94
DNL4YOR005C DIT1P21623 536 aa2.93□□□□□ -1.94
DNL4YOR005C BLI1P35727 113 aa2.93□□□□□ -1.94
DNL4YOR005C GIP2P40036 548 aa2.93□□□□□ -1.94
DNL4YOR005C DOT6P40059 670 aaKnown RBP2.93□□□□□ -1.94
DNL4YOR005C UBC9P50623 157 aaPredicted RBP2.93□□□□□ -1.94
DNL4YOR005C TAD1P53065 400 aa2.93□□□□□ -1.94
DNL4YOR005C YLL054CQ12244 843 aa2.93□□□□□ -1.94
DNL4YOR005C RTC1Q08281 1341 aa2.93□□□□□ -1.94
DNL4YOR005C SPO14P36126 1683 aa2.93□□□□□ -1.94
DNL4YOR005C RAV1P47104 1357 aa2.93□□□□□ -1.94
DNL4YOR005C QCR6P00127 147 aa2.93□□□□□ -1.94
DNL4YOR005C CDC48P25694 835 aaKnown RBP2.93□□□□□ -1.94
DNL4YOR005C RRN3P36070 627 aa2.93□□□□□ -1.94
DNL4YOR005C UGA2P38067 497 aa2.93□□□□□ -1.94
DNL4YOR005C YER158CP40095 573 aa2.93□□□□□ -1.94
DNL4YOR005C TMA108P40462 946 aa2.93□□□□□ -1.94
DNL4YOR005C ALY2P47029 1046 aa2.93□□□□□ -1.94
DNL4YOR005C ELA1P53861 379 aaPredicted RBP2.93□□□□□ -1.94
DNL4YOR005C PTA1Q01329 785 aaPredicted RBP2.93□□□□□ -1.94
DNL4YOR005C YHM2Q04013 314 aa2.93□□□□□ -1.94
DNL4YOR005C GFA1P14742 717 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C SEC18P18759 758 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C ATP12P22135 325 aa2.92□□□□□ -1.94
DNL4YOR005C FPS1P23900 669 aa2.92□□□□□ -1.94
DNL4YOR005C RKM3P38222 552 aa2.92□□□□□ -1.94
DNL4YOR005C FAT1P38225 669 aa2.92□□□□□ -1.94
DNL4YOR005C GIC1P38785 314 aa2.92□□□□□ -1.94
DNL4YOR005C YFL054CP43549 646 aa2.92□□□□□ -1.94
DNL4YOR005C NCE103P53615 221 aa2.92□□□□□ -1.94
DNL4YOR005C HLR1Q04429 423 aa2.92□□□□□ -1.94
DNL4YOR005C YLR257WQ06146 321 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C SDH5Q08230 162 aa2.92□□□□□ -1.94
DNL4YOR005C ELG1Q12050 791 aa2.92□□□□□ -1.94
DNL4YOR005C YBR182C-AQ8TGU6 64 aa2.92□□□□□ -1.94
DNL4YOR005C ERS1P17261 260 aa2.92□□□□□ -1.94
DNL4YOR005C DAL7P21826 554 aa2.92□□□□□ -1.94
DNL4YOR005C ESL2P36168 1195 aa2.92□□□□□ -1.94
DNL4YOR005C PSY4P38193 441 aa2.92□□□□□ -1.94
DNL4YOR005C PUS4P48567 403 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C NOG2P53742 486 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C TEP1P53916 434 aa2.92□□□□□ -1.94
DNL4YOR005C LRS4Q04087 347 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
DNL4YOR005C RVB2Q12464 471 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C BI4P03879 638 aa2.92□□□□□ -1.94
DNL4YOR005C SNF5P18480 905 aa2.92□□□□□ -1.94
DNL4YOR005C RER1P25560 188 aa2.92□□□□□ -1.94
DNL4YOR005C YCL002CP25565 263 aa2.92□□□□□ -1.94
DNL4YOR005C SHM2P37291 469 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C VPS8P39702 1274 aa2.92□□□□□ -1.94
DNL4YOR005C RLP7P40693 322 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C MOT3P54785 490 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C HOS3Q02959 697 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C SRT1Q03175 343 aa2.92□□□□□ -1.94
DNL4YOR005C YMR265CQ03508 461 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C BLS1Q06071 122 aa2.92□□□□□ -1.94
DNL4YOR005C HIM1Q06674 414 aa2.92□□□□□ -1.94
DNL4YOR005C IMH1Q06704 911 aaKnown RBP2.92□□□□□ -1.94
DNL4YOR005C SLP1Q12232 587 aa2.92□□□□□ -1.94
DNL4YOR005C YDR461C-AQ2V2P7 80 aa2.92□□□□□ -1.94
DNL4YOR005C YSP2Q06681 1438 aa2.91□□□□□ -1.94
DNL4YOR005C HCA4P20448 770 aaKnown RBP2.91□□□□□ -1.94
DNL4YOR005C ROX1P25042 368 aa2.91□□□□□ -1.94
DNL4YOR005C MDJ1P35191 511 aa2.91□□□□□ -1.94
DNL4YOR005C ASK10P48361 1146 aa2.91□□□□□ -1.94
DNL4YOR005C YMR074CQ04773 145 aa2.91□□□□□ -1.94
DNL4YOR005C VIP1Q06685 1146 aaKnown RBP2.91□□□□□ -1.94
DNL4YOR005C DCS2Q12123 353 aa2.91□□□□□ -1.94
DNL4YOR005C EDE1P34216 1381 aa2.91□□□□□ -1.94
DNL4YOR005C NUP157P40064 1391 aaKnown RBP2.91□□□□□ -1.94
DNL4YOR005C MSH1P25846 959 aa2.91□□□□□ -1.94
DNL4YOR005C SEC65P29478 273 aa2.91□□□□□ -1.94
DNL4YOR005C FUN30P31380 1131 aa2.91□□□□□ -1.94
DNL4YOR005C NNK1P36003 928 aa2.91□□□□□ -1.94
DNL4YOR005C YKR051WP36142 418 aa2.91□□□□□ -1.94
DNL4YOR005C TED1P40533 473 aa2.91□□□□□ -1.94
DNL4YOR005C YJL045WP47052 634 aa2.91□□□□□ -1.94
DNL4YOR005C BNA2P47125 453 aa2.91□□□□□ -1.94
DNL4YOR005C RNR4P49723 345 aaKnown RBP2.91□□□□□ -1.94
DNL4YOR005C LYS5P50113 272 aa2.91□□□□□ -1.94
DNL4YOR005C CUZ1P53899 274 aa2.91□□□□□ -1.94
DNL4YOR005C SFB2P53953 876 aa2.91□□□□□ -1.94
DNL4YOR005C SPC19Q03954 165 aa2.91□□□□□ -1.94
DNL4YOR005C EIS1Q05050 843 aaKnown RBP2.91□□□□□ -1.94
DNL4YOR005C HRK1Q08732 759 aaKnown RBP2.91□□□□□ -1.94
DNL4YOR005C TY4B-PA0A0B7P3V8 1104 aa2.9□□□□□ -1.94
DNL4YOR005C MET22P32179 357 aa2.9□□□□□ -1.94
DNL4YOR005C RPS0AP32905 252 aaKnown RBP2.9□□□□□ -1.94
DNL4YOR005C GLY1P37303 387 aaKnown RBP2.9□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 106.2 ms