RNA–Protein interactions for RNA: YNL039W

BDP1, Transcript of Essential subunit of RNA polymerase III transcription factor (TFIIIB), yeastyeast

Gene BDP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDP1YNL039W SDS22P36047 338 aa5.34□□□□□ -1.55
BDP1YNL039W RRN3P36070 627 aa5.34□□□□□ -1.55
BDP1YNL039W SSZ1P38788 538 aaKnown RBP5.34□□□□□ -1.55
BDP1YNL039W RAD26P40352 1085 aa5.34□□□□□ -1.55
BDP1YNL039W ESL1P40456 1118 aa5.34□□□□□ -1.55
BDP1YNL039W YJR039WP47107 1121 aa5.34□□□□□ -1.55
BDP1YNL039W PUS4P48567 403 aaKnown RBP5.34□□□□□ -1.55
BDP1YNL039W ZIP2P53061 704 aa5.34□□□□□ -1.55
BDP1YNL039W CWC2Q12046 339 aaPredicted RBP5.34□□□□□ -1.55
BDP1YNL039W SVS1Q12254 260 aa5.34□□□□□ -1.55
BDP1YNL039W TY1A-NL1Q12391 440 aaKnown RBP5.34□□□□□ -1.55
BDP1YNL039W SAM35P14693 329 aa5.34□□□□□ -1.56
BDP1YNL039W NGG1P32494 702 aa5.34□□□□□ -1.56
BDP1YNL039W YHL012WP38709 493 aa5.34□□□□□ -1.56
BDP1YNL039W EAR1Q03212 550 aa5.34□□□□□ -1.56
BDP1YNL039W XYL2Q07993 356 aa5.34□□□□□ -1.56
BDP1YNL039W RSB1Q08417 382 aa5.34□□□□□ -1.56
BDP1YNL039W YKR075CP36155 307 aa5.33□□□□□ -1.56
BDP1YNL039W POA1P38218 177 aa5.33□□□□□ -1.56
BDP1YNL039W SRP68P38687 599 aaKnown RBP5.33□□□□□ -1.56
BDP1YNL039W RRM3P38766 723 aa5.33□□□□□ -1.56
BDP1YNL039W EAF5P39995 279 aa5.33□□□□□ -1.56
BDP1YNL039W YIR007WP40566 764 aa5.33□□□□□ -1.56
BDP1YNL039W SBE2P42223 864 aaKnown RBP5.33□□□□□ -1.56
BDP1YNL039W RAI1P53063 387 aaKnown RBP5.33□□□□□ -1.56
BDP1YNL039W PUS2P53167 370 aa5.33□□□□□ -1.56
BDP1YNL039W ARP4P80428 489 aa5.33□□□□□ -1.56
BDP1YNL039W GPD1Q00055 391 aaKnown RBP5.33□□□□□ -1.56
BDP1YNL039W HAL9Q12180 1030 aa5.33□□□□□ -1.56
BDP1YNL039W GLN4P13188 809 aaKnown RBP5.32□□□□□ -1.56
BDP1YNL039W XRS2P33301 854 aa5.32□□□□□ -1.56
BDP1YNL039W BLI1P35727 113 aa5.32□□□□□ -1.56
BDP1YNL039W STL1P39932 569 aa5.32□□□□□ -1.56
BDP1YNL039W VID28P40547 921 aa5.32□□□□□ -1.56
BDP1YNL039W IRC5P43610 853 aa5.32□□□□□ -1.56
BDP1YNL039W NGL1Q08213 363 aaKnown RBP5.32□□□□□ -1.56
BDP1YNL039W PSF3Q12146 194 aa5.32□□□□□ -1.56
BDP1YNL039W CDC26P14724 124 aa5.32□□□□□ -1.56
BDP1YNL039W RPD3P32561 433 aa5.32□□□□□ -1.56
BDP1YNL039W MDL2P33311 773 aa5.32□□□□□ -1.56
BDP1YNL039W APM3P38153 483 aa5.32□□□□□ -1.56
BDP1YNL039W PPE1P38796 400 aa5.32□□□□□ -1.56
BDP1YNL039W BEM4P39011 633 aa5.32□□□□□ -1.56
BDP1YNL039W SMK1P41808 388 aa5.32□□□□□ -1.56
BDP1YNL039W BRE5P53741 515 aaKnown RBP5.32□□□□□ -1.56
BDP1YNL039W NOP15P53927 220 aaPredicted RBP5.32□□□□□ -1.56
BDP1YNL039W SPC19Q03954 165 aa5.32□□□□□ -1.56
BDP1YNL039W RSC58Q07979 502 aa5.32□□□□□ -1.56
BDP1YNL039W TRK2P28584 889 aa5.31□□□□□ -1.56
BDP1YNL039W HXT4P32467 576 aa5.31□□□□□ -1.56
BDP1YNL039W SEG2P34250 1132 aa5.31□□□□□ -1.56
BDP1YNL039W ACO2P39533 789 aa5.31□□□□□ -1.56
BDP1YNL039W VPS8P39702 1274 aa5.31□□□□□ -1.56
BDP1YNL039W SPC72P39723 622 aa5.31□□□□□ -1.56
BDP1YNL039W KAP123P40069 1113 aaKnown RBP5.31□□□□□ -1.56
BDP1YNL039W BNA1P47096 177 aa5.31□□□□□ -1.56
BDP1YNL039W ARC35P53731 342 aaKnown RBP5.31□□□□□ -1.56
BDP1YNL039W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.31□□□□□ -1.56not detected
BDP1YNL039W MTD1Q02046 320 aaKnown RBP5.31□□□□□ -1.56
BDP1YNL039W EIS1Q05050 843 aaKnown RBP5.31□□□□□ -1.56
BDP1YNL039W YLR407WQ06070 228 aa5.31□□□□□ -1.56
BDP1YNL039W SDH5Q08230 162 aa5.31□□□□□ -1.56
BDP1YNL039W YVC1Q12324 675 aa5.31□□□□□ -1.56
BDP1YNL039W TGL1P34163 548 aa5.3□□□□□ -1.56
BDP1YNL039W YHR202WP38887 602 aa5.3□□□□□ -1.56
BDP1YNL039W SCS2P40075 244 aaKnown RBP5.3□□□□□ -1.56
BDP1YNL039W MAD3P47074 515 aa5.3□□□□□ -1.56
BDP1YNL039W DUS1P53759 423 aaKnown RBP5.3□□□□□ -1.56
BDP1YNL039W YDR444WQ04093 687 aa5.3□□□□□ -1.56
BDP1YNL039W MIP6P38760 659 aaKnown RBP5.29□□□□□ -1.56
BDP1YNL039W YIL108WP40483 696 aaKnown RBP5.29□□□□□ -1.56
BDP1YNL039W SGD1Q06132 899 aa5.29□□□□□ -1.56
BDP1YNL039W SNU66Q12420 587 aaPredicted RBP5.29□□□□□ -1.56
BDP1YNL039W ADH4P10127 382 aa5.29□□□□□ -1.56
BDP1YNL039W SAN1P22470 610 aa5.29□□□□□ -1.56
BDP1YNL039W YCL049CP25577 312 aa5.29□□□□□ -1.56
BDP1YNL039W DGR2P32330 852 aa5.29□□□□□ -1.56
BDP1YNL039W SLC1P33333 303 aa5.29□□□□□ -1.56
BDP1YNL039W AKL1P38080 1108 aaKnown RBP5.29□□□□□ -1.56
BDP1YNL039W SWD1P39706 426 aa5.29□□□□□ -1.56
BDP1YNL039W MRPL13Q02204 264 aa5.29□□□□□ -1.56
BDP1YNL039W SSL1Q04673 461 aaPredicted RBP5.29□□□□□ -1.56
BDP1YNL039W ENT1Q12518 454 aa5.29□□□□□ -1.56
BDP1YNL039W MTF2P10849 440 aa5.28□□□□□ -1.56
BDP1YNL039W MET22P32179 357 aa5.28□□□□□ -1.56
BDP1YNL039W MF(ALPHA)2P32435 120 aa5.28□□□□□ -1.56
BDP1YNL039W TFC3P34111 1160 aa5.28□□□□□ -1.56
BDP1YNL039W TAF5P38129 798 aa5.28□□□□□ -1.56
BDP1YNL039W RFC5P38251 354 aa5.28□□□□□ -1.56
BDP1YNL039W LAM1P38851 1228 aa5.28□□□□□ -1.56
BDP1YNL039W VTC2P43585 828 aa5.28□□□□□ -1.56
BDP1YNL039W ENP2P48234 707 aaKnown RBP5.28□□□□□ -1.56
BDP1YNL039W YMR210WQ03649 449 aa5.28□□□□□ -1.56
BDP1YNL039W IMH1Q06704 911 aaKnown RBP5.28□□□□□ -1.56
BDP1YNL039W RPS17AP02407 136 aaKnown RBP5.27□□□□□ -1.57
BDP1YNL039W VAS1P07806 1104 aaKnown RBP5.27□□□□□ -1.57
BDP1YNL039W YEL076C-AP0CX16 216 aa5.27□□□□□ -1.57
BDP1YNL039W YLR464WP0CX17 216 aa5.27□□□□□ -1.57
BDP1YNL039W HSF1P10961 833 aa5.27□□□□□ -1.57
BDP1YNL039W RPS17BP14127 136 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms