RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W UBC9P50623 157 aaPredicted RBP7.87□□□□□ -1.15
HDA1YNL021W YNR063WP53749 607 aa7.87□□□□□ -1.15
HDA1YNL021W SOG2Q08817 791 aa7.87□□□□□ -1.15
HDA1YNL021W PTC5Q12511 572 aa7.87□□□□□ -1.15
HDA1YNL021W LEU2P04173 364 aaPredicted RBP7.87□□□□□ -1.15
HDA1YNL021W AAC3P18238 307 aa7.87□□□□□ -1.15
HDA1YNL021W OAF3P36023 863 aa7.87□□□□□ -1.15
HDA1YNL021W ENV11P53246 860 aa7.87□□□□□ -1.15
HDA1YNL021W NHX1Q04121 633 aa7.87□□□□□ -1.15
HDA1YNL021W HRQ1Q05549 1077 aa7.87□□□□□ -1.15
HDA1YNL021W RGA2Q06407 1009 aa7.87□□□□□ -1.15
HDA1YNL021W RER1P25560 188 aa7.86□□□□□ -1.15
HDA1YNL021W HAS1Q03532 505 aaKnown RBP7.86□□□□□ -1.15
HDA1YNL021W SPC19Q03954 165 aa7.86□□□□□ -1.15
HDA1YNL021W MDJ1P35191 511 aa7.85□□□□□ -1.15
HDA1YNL021W TSL1P38427 1098 aaKnown RBP7.85□□□□□ -1.15
HDA1YNL021W SPC72P39723 622 aa7.85□□□□□ -1.15
HDA1YNL021W FET4P40988 552 aa7.85□□□□□ -1.15
HDA1YNL021W DAM1P53267 343 aa7.85□□□□□ -1.15
HDA1YNL021W TEP1P53916 434 aa7.85□□□□□ -1.15
HDA1YNL021W TAF11Q04226 346 aa7.85□□□□□ -1.15
HDA1YNL021W TFC6Q06339 672 aa7.85□□□□□ -1.15
HDA1YNL021W VMA8P32610 256 aaKnown RBP7.85□□□□□ -1.15
HDA1YNL021W NCL1P38205 684 aaKnown RBP7.85□□□□□ -1.15
HDA1YNL021W TDA3P38758 523 aa7.85□□□□□ -1.15
HDA1YNL021W NPP2P39997 493 aa7.85□□□□□ -1.15
HDA1YNL021W HED1Q03937 162 aa7.85□□□□□ -1.15
HDA1YNL021W BLS1Q06071 122 aa7.85□□□□□ -1.15
HDA1YNL021W SPO21Q12411 609 aa7.85□□□□□ -1.15
HDA1YNL021W DPH6Q12429 685 aa7.85□□□□□ -1.15
HDA1YNL021W CDC4P07834 779 aa7.84□□□□□ -1.15
HDA1YNL021W NAT1P12945 854 aaKnown RBP7.84□□□□□ -1.15
HDA1YNL021W DOT6P40059 670 aaKnown RBP7.84□□□□□ -1.15
HDA1YNL021W DPH1P40487 425 aaKnown RBP7.84□□□□□ -1.15
HDA1YNL021W TDA9Q04545 1251 aa7.84□□□□□ -1.15
HDA1YNL021W SGD1Q06132 899 aa7.84□□□□□ -1.15
HDA1YNL021W HSP82P02829 709 aaKnown RBP7.84□□□□□ -1.16
HDA1YNL021W TPM1P17536 199 aaKnown RBP7.84□□□□□ -1.16
HDA1YNL021W PAH1P32567 862 aa7.84□□□□□ -1.16
HDA1YNL021W DLD1P32891 587 aa7.84□□□□□ -1.16
HDA1YNL021W PGM2P37012 569 aaKnown RBP7.84□□□□□ -1.16
HDA1YNL021W NOP16P40007 231 aaKnown RBP7.84□□□□□ -1.16
HDA1YNL021W TPA1P40032 644 aaKnown RBP7.84□□□□□ -1.16
HDA1YNL021W YGR016WP53209 190 aa7.84□□□□□ -1.16
HDA1YNL021W YMR018WQ04364 514 aa7.84□□□□□ -1.16
HDA1YNL021W TAP42Q04372 366 aa7.84□□□□□ -1.16
HDA1YNL021W OMS1Q06668 471 aa7.84□□□□□ -1.16
HDA1YNL021W MSC7P38694 644 aa7.83□□□□□ -1.16
HDA1YNL021W DUN1P39009 513 aa7.83□□□□□ -1.16
HDA1YNL021W PCL10P53124 433 aa7.83□□□□□ -1.16
HDA1YNL021W NOP56Q12460 504 aaKnown RBP RIP-Chip data7.83□□□□□ -1.16not detected
HDA1YNL021W RPP0P05317 312 aaKnown RBP7.82□□□□□ -1.16
HDA1YNL021W SLA2P33338 968 aa7.82□□□□□ -1.16
HDA1YNL021W ABZ1P37254 787 aaPredicted RBP7.82□□□□□ -1.16
HDA1YNL021W ARL1P38116 183 aaKnown RBP7.82□□□□□ -1.16
HDA1YNL021W PRE3P38624 215 aa7.82□□□□□ -1.16
HDA1YNL021W PRP43P53131 767 aaKnown RBP7.82□□□□□ -1.16
HDA1YNL021W RSC2Q06488 889 aa7.82□□□□□ -1.16
HDA1YNL021W SCM3Q12334 223 aa7.82□□□□□ -1.16
HDA1YNL021W YKL050CP35736 922 aa7.82□□□□□ -1.16
HDA1YNL021W CLA4P48562 842 aa7.82□□□□□ -1.16
HDA1YNL021W PUS4P48567 403 aaKnown RBP7.82□□□□□ -1.16
HDA1YNL021W TIM10P87108 93 aa7.82□□□□□ -1.16
HDA1YNL021W YHM2Q04013 314 aa7.82□□□□□ -1.16
HDA1YNL021W YKU80Q04437 629 aa7.82□□□□□ -1.16
HDA1YNL021W SPS1P08458 490 aa7.81□□□□□ -1.16
HDA1YNL021W MRPL16P38064 232 aa7.81□□□□□ -1.16
HDA1YNL021W AXL2P38928 823 aa7.81□□□□□ -1.16
HDA1YNL021W CCM1P48237 864 aaPredicted RBP7.81□□□□□ -1.16
HDA1YNL021W ASK10P48361 1146 aa7.81□□□□□ -1.16
HDA1YNL021W YKE2P52553 114 aa7.81□□□□□ -1.16
HDA1YNL021W SNF1P06782 633 aaKnown RBP7.81□□□□□ -1.16
HDA1YNL021W NCP1P16603 691 aaKnown RBP7.81□□□□□ -1.16
HDA1YNL021W MSH1P25846 959 aa7.81□□□□□ -1.16
HDA1YNL021W GPD2P41911 440 aaKnown RBP7.81□□□□□ -1.16
HDA1YNL021W RRT6P53117 311 aaPredicted RBP7.81□□□□□ -1.16
HDA1YNL021W YGR250CP53316 781 aaKnown RBP7.81□□□□□ -1.16
HDA1YNL021W ADE6P38972 1358 aaKnown RBP7.8□□□□□ -1.16
HDA1YNL021W EAF5P39995 279 aa7.8□□□□□ -1.16
HDA1YNL021W RIC1P40395 1056 aa7.8□□□□□ -1.16
HDA1YNL021W YFL054CP43549 646 aa7.8□□□□□ -1.16
HDA1YNL021W IRC6P43615 237 aa7.8□□□□□ -1.16
HDA1YNL021W SRP1Q02821 542 aaKnown RBP7.8□□□□□ -1.16
HDA1YNL021W YDR514CQ04408 483 aa7.8□□□□□ -1.16
HDA1YNL021W DCS2Q12123 353 aa7.8□□□□□ -1.16
HDA1YNL021W MRP7P12687 371 aa7.79□□□□□ -1.16
HDA1YNL021W RAD16P31244 790 aa7.79□□□□□ -1.16
HDA1YNL021W VPH1P32563 840 aaKnown RBP7.79□□□□□ -1.16
HDA1YNL021W UBS1P38290 277 aa7.79□□□□□ -1.16
HDA1YNL021W VHR1P40522 640 aa7.79□□□□□ -1.16
HDA1YNL021W CPR6P53691 371 aaKnown RBP7.79□□□□□ -1.16
HDA1YNL021W MEC3Q02574 474 aa7.79□□□□□ -1.16
HDA1YNL021W YCL002CP25565 263 aa7.79□□□□□ -1.16
HDA1YNL021W ANP1P32629 500 aa7.79□□□□□ -1.16
HDA1YNL021W SMY2P32909 740 aaKnown RBP7.79□□□□□ -1.16
HDA1YNL021W LAM1P38851 1228 aa7.79□□□□□ -1.16
HDA1YNL021W NUR1Q12066 484 aa7.79□□□□□ -1.16
HDA1YNL021W PGA3Q12746 312 aaKnown RBP7.79□□□□□ -1.16
HDA1YNL021W ARG82P07250 355 aa7.78□□□□□ -1.16
HDA1YNL021W HCA4P20448 770 aaKnown RBP7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 58.4 ms