RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C FOL2P51601 243 aaKnown RBP5.25□□□□□ -1.57
EAR1YMR171C HST1P53685 503 aa5.25□□□□□ -1.57
EAR1YMR171C ALO1P54783 526 aaKnown RBP5.25□□□□□ -1.57
EAR1YMR171C RSM24Q03976 319 aa5.25□□□□□ -1.57
EAR1YMR171C BIK1P11709 440 aa5.24□□□□□ -1.57
EAR1YMR171C RPL8AP17076 256 aaKnown RBP5.24□□□□□ -1.57
EAR1YMR171C GCD7P32502 381 aaPredicted RBP5.24□□□□□ -1.57
EAR1YMR171C RSC1P53236 928 aa5.24□□□□□ -1.57
EAR1YMR171C TFB2Q02939 513 aa5.24□□□□□ -1.57
EAR1YMR171C MSC2Q03455 724 aa5.24□□□□□ -1.57
EAR1YMR171C QCR6P00127 147 aa5.24□□□□□ -1.57
EAR1YMR171C MRP7P12687 371 aa5.24□□□□□ -1.57
EAR1YMR171C SRM1P21827 482 aa5.24□□□□□ -1.57
EAR1YMR171C KCC4P25389 1037 aa5.24□□□□□ -1.57
EAR1YMR171C VBA3P25594 458 aa5.24□□□□□ -1.57
EAR1YMR171C RPC82P32349 654 aa5.24□□□□□ -1.57
EAR1YMR171C PUB1P32588 453 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57 RIP-Chip
EAR1YMR171C RAD24P32641 659 aa5.24□□□□□ -1.57
EAR1YMR171C CTH1P47976 325 aa5.24□□□□□ -1.57
EAR1YMR171C DAM1P53267 343 aa5.24□□□□□ -1.57
EAR1YMR171C SIZ1Q04195 904 aa5.24□□□□□ -1.57
EAR1YMR171C VPS20Q04272 221 aa5.24□□□□□ -1.57
EAR1YMR171C BRE4Q07660 1125 aa5.24□□□□□ -1.57
EAR1YMR171C NOP58Q12499 511 aaKnown RBP5.24□□□□□ -1.57
EAR1YMR171C ADR1P07248 1323 aa5.23□□□□□ -1.57
EAR1YMR171C GSY1P23337 708 aa5.23□□□□□ -1.57
EAR1YMR171C TY4A-JP47023 414 aa5.23□□□□□ -1.57
EAR1YMR171C NPA3P47122 385 aa5.23□□□□□ -1.57
EAR1YMR171C NIT3P49954 291 aa5.23□□□□□ -1.57
EAR1YMR171C YGL081WP53156 320 aa5.23□□□□□ -1.57
EAR1YMR171C ENV11P53246 860 aa5.23□□□□□ -1.57
EAR1YMR171C YOL057WQ08225 711 aa5.23□□□□□ -1.57
EAR1YMR171C CDC9P04819 755 aa5.22□□□□□ -1.57
EAR1YMR171C MPH2P0CD99 609 aa5.22□□□□□ -1.57
EAR1YMR171C SFP1P32432 683 aa5.22□□□□□ -1.57
EAR1YMR171C RPN12P32496 274 aa5.22□□□□□ -1.57
EAR1YMR171C SRP101P32916 621 aa5.22□□□□□ -1.57
EAR1YMR171C MIC60P36112 540 aa5.22□□□□□ -1.57
EAR1YMR171C RKM3P38222 552 aa5.22□□□□□ -1.57
EAR1YMR171C HYR1P40581 163 aaKnown RBP5.22□□□□□ -1.57
EAR1YMR171C ATP25Q03153 612 aa5.22□□□□□ -1.57
EAR1YMR171C MET7Q08645 548 aa5.22□□□□□ -1.57
EAR1YMR171C NCB2Q92317 146 aa5.22□□□□□ -1.57
EAR1YMR171C CYC1P00044 109 aaPredicted RBP5.21□□□□□ -1.57
EAR1YMR171C CMP2P14747 604 aa5.21□□□□□ -1.57
EAR1YMR171C LIP5P32875 414 aa5.21□□□□□ -1.57
EAR1YMR171C ETP1P38748 585 aaKnown RBP5.21□□□□□ -1.57
EAR1YMR171C CIR1P42940 261 aa5.21□□□□□ -1.57
EAR1YMR171C MDG1P53885 366 aa5.21□□□□□ -1.57
EAR1YMR171C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.21□□□□□ -1.57not detected
EAR1YMR171C RFA1P22336 621 aaKnown RBP5.21□□□□□ -1.58
EAR1YMR171C MTC2P34246 357 aa5.21□□□□□ -1.58
EAR1YMR171C RSC3Q06639 885 aa5.21□□□□□ -1.58
EAR1YMR171C CDA1Q06702 301 aa5.21□□□□□ -1.58
EAR1YMR171C YDL177CQ12257 170 aa5.21□□□□□ -1.58
EAR1YMR171C PDR18P53756 1333 aa5.2□□□□□ -1.58
EAR1YMR171C GAL10P04397 699 aa5.2□□□□□ -1.58
EAR1YMR171C SRD1P09007 221 aa5.2□□□□□ -1.58
EAR1YMR171C URA1P28272 314 aaPredicted RBP5.2□□□□□ -1.58
EAR1YMR171C OMA1P36163 345 aa5.2□□□□□ -1.58
EAR1YMR171C CRP1P38845 465 aaKnown RBP5.2□□□□□ -1.58
EAR1YMR171C INP52P50942 1183 aa5.2□□□□□ -1.58
EAR1YMR171C RAI1P53063 387 aaKnown RBP5.2□□□□□ -1.58
EAR1YMR171C PEX14P53112 341 aa5.2□□□□□ -1.58
EAR1YMR171C YGR012WP53206 393 aa5.2□□□□□ -1.58
EAR1YMR171C YNL193WP53870 558 aa5.2□□□□□ -1.58
EAR1YMR171C YDR514CQ04408 483 aa5.2□□□□□ -1.58
EAR1YMR171C YLR001CQ07895 862 aa5.2□□□□□ -1.58
EAR1YMR171C ETT1Q08421 412 aaKnown RBP5.2□□□□□ -1.58
EAR1YMR171C TPM1P17536 199 aaKnown RBP5.19□□□□□ -1.58
EAR1YMR171C TSR4P25040 408 aa5.19□□□□□ -1.58
EAR1YMR171C PER1P25625 357 aa5.19□□□□□ -1.58
EAR1YMR171C ZRG8P40021 1076 aa5.19□□□□□ -1.58
EAR1YMR171C TAD1P53065 400 aa5.19□□□□□ -1.58
EAR1YMR171C HDA1P53973 706 aa5.19□□□□□ -1.58
EAR1YMR171C SLM3Q12093 417 aa5.19□□□□□ -1.58
EAR1YMR171C GLT1Q12680 2145 aaKnown RBP5.19□□□□□ -1.58
EAR1YMR171C HSF1P10961 833 aa5.18□□□□□ -1.58
EAR1YMR171C ENA1P13587 1091 aa5.18□□□□□ -1.58
EAR1YMR171C DAL7P21826 554 aa5.18□□□□□ -1.58
EAR1YMR171C STE13P33894 931 aa5.18□□□□□ -1.58
EAR1YMR171C NUP133P36161 1157 aa5.18□□□□□ -1.58
EAR1YMR171C TPM2P40414 161 aa5.18□□□□□ -1.58
EAR1YMR171C CEP3P40969 608 aa5.18□□□□□ -1.58
EAR1YMR171C NOG2P53742 486 aaKnown RBP5.18□□□□□ -1.58
EAR1YMR171C ENA2Q01896 1091 aa5.18□□□□□ -1.58
EAR1YMR171C REH1Q06709 432 aa5.18□□□□□ -1.58
EAR1YMR171C BRE1Q07457 700 aaKnown RBP5.18□□□□□ -1.58
EAR1YMR171C ENA5Q12691 1091 aa5.18□□□□□ -1.58
EAR1YMR171C RPL19AP0CX82 189 aaKnown RBP5.18□□□□□ -1.58
EAR1YMR171C RPL19BP0CX83 189 aaPredicted RBP5.18□□□□□ -1.58
EAR1YMR171C RAD18P10862 487 aa5.18□□□□□ -1.58
EAR1YMR171C YCL002CP25565 263 aa5.18□□□□□ -1.58
EAR1YMR171C SWC3P31376 625 aa5.18□□□□□ -1.58
EAR1YMR171C STO1P34160 861 aaKnown RBP5.18□□□□□ -1.58
EAR1YMR171C MCD4P36051 919 aa5.18□□□□□ -1.58
EAR1YMR171C POL12P38121 705 aaPredicted RBP5.18□□□□□ -1.58
EAR1YMR171C CAF16P43569 289 aa5.18□□□□□ -1.58
EAR1YMR171C PEX19Q07418 342 aa5.18□□□□□ -1.58
EAR1YMR171C RIM20Q12033 661 aa5.18□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms