RNA–Protein interactions for RNA: YLR363C

NMD4, Transcript of Protein that may be involved in nonsense-mediated mRNA decay, yeastyeast

Gene NMD4, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD4YLR363C YHR078WP38799 552 aa6.6□□□□□ -1.35
NMD4YLR363C NUP82P40368 713 aa6.6□□□□□ -1.35
NMD4YLR363C HSV2P50079 448 aaPredicted RBP6.6□□□□□ -1.35
NMD4YLR363C BUD21Q08492 214 aaPredicted RBP6.6□□□□□ -1.35
NMD4YLR363C MET7Q08645 548 aa6.6□□□□□ -1.35
NMD4YLR363C RAD53P22216 821 aa6.59□□□□□ -1.35
NMD4YLR363C SEC21P32074 935 aaKnown RBP6.59□□□□□ -1.35
NMD4YLR363C DUS1P53759 423 aaKnown RBP6.59□□□□□ -1.35
NMD4YLR363C FPR4Q06205 392 aaPredicted RBP6.59□□□□□ -1.35
NMD4YLR363C AIM39Q08223 395 aa6.59□□□□□ -1.35
NMD4YLR363C YLR125WQ12138 136 aa6.59□□□□□ -1.35
NMD4YLR363C SWM1Q12379 170 aa6.59□□□□□ -1.35
NMD4YLR363C LAS17Q12446 633 aa6.59□□□□□ -1.35
NMD4YLR363C SAP190P36123 1033 aa6.58□□□□□ -1.36
NMD4YLR363C LRS4Q04087 347 aaKnown RBP6.58□□□□□ -1.36
NMD4YLR363C PEX19Q07418 342 aa6.58□□□□□ -1.36
NMD4YLR363C HAL9Q12180 1030 aa6.58□□□□□ -1.36
NMD4YLR363C YOR022CQ12204 715 aa6.58□□□□□ -1.36
NMD4YLR363C PRC1P00729 532 aa6.57□□□□□ -1.36
NMD4YLR363C PHO8P11491 566 aa6.57□□□□□ -1.36
NMD4YLR363C YCL002CP25565 263 aa6.57□□□□□ -1.36
NMD4YLR363C SLU7Q02775 382 aaKnown RBP6.57□□□□□ -1.36
NMD4YLR363C PUS9Q12069 462 aa6.57□□□□□ -1.36
NMD4YLR363C CIT2P08679 460 aa6.56□□□□□ -1.36
NMD4YLR363C HRR25P29295 494 aaKnown RBP6.56□□□□□ -1.36
NMD4YLR363C SET5P38890 526 aaKnown RBP6.56□□□□□ -1.36
NMD4YLR363C AIM21P40563 679 aa6.56□□□□□ -1.36
NMD4YLR363C MSE1P48525 536 aa6.56□□□□□ -1.36
NMD4YLR363C ZDS1P50111 915 aaKnown RBP6.56□□□□□ -1.36
NMD4YLR363C IML1P47170 1584 aa6.56□□□□□ -1.36
NMD4YLR363C TY1B-NL2Q99337 1749 aaKnown RBP6.56□□□□□ -1.36
NMD4YLR363C NUP188P52593 1655 aaKnown RBP6.55□□□□□ -1.36
NMD4YLR363C MSS4P38994 779 aa6.55□□□□□ -1.36
NMD4YLR363C MAL11P53048 616 aa6.55□□□□□ -1.36
NMD4YLR363C TRP4P07285 380 aaPredicted RBP6.54□□□□□ -1.36
NMD4YLR363C TUB3P09734 445 aaKnown RBP6.54□□□□□ -1.36
NMD4YLR363C SHR5P41912 237 aa6.54□□□□□ -1.36
NMD4YLR363C TY4A-JP47023 414 aa6.54□□□□□ -1.36
NMD4YLR363C SUN4P53616 420 aa6.54□□□□□ -1.36
NMD4YLR363C RSC3Q06639 885 aa6.54□□□□□ -1.36
NMD4YLR363C TRM11Q12463 433 aa6.54□□□□□ -1.36
NMD4YLR363C VMR1P38735 1592 aa6.53□□□□□ -1.36
NMD4YLR363C PZF1P39933 429 aa6.53□□□□□ -1.36
NMD4YLR363C RLP7P40693 322 aaKnown RBP6.53□□□□□ -1.36
NMD4YLR363C THI21Q08975 551 aa6.53□□□□□ -1.36
NMD4YLR363C YBR182C-AQ8TGU6 64 aa6.53□□□□□ -1.36
NMD4YLR363C MDM12Q92328 271 aa6.53□□□□□ -1.36
NMD4YLR363C DIF1O13577 133 aa6.52□□□□□ -1.37
NMD4YLR363C PER1P25625 357 aa6.52□□□□□ -1.37
NMD4YLR363C THI4P32318 326 aa6.52□□□□□ -1.37
NMD4YLR363C EFT1P32324 842 aaKnown RBP6.52□□□□□ -1.37
NMD4YLR363C CTF13P35203 478 aa6.52□□□□□ -1.37
NMD4YLR363C VHR1P40522 640 aa6.52□□□□□ -1.37
NMD4YLR363C SSY5P47002 699 aa6.52□□□□□ -1.37
NMD4YLR363C BUL1P48524 976 aa6.52□□□□□ -1.37
NMD4YLR363C ASI2P53895 289 aa6.52□□□□□ -1.37
NMD4YLR363C PNS1Q12412 539 aa6.52□□□□□ -1.37
NMD4YLR363C GSY1P23337 708 aa6.51□□□□□ -1.37
NMD4YLR363C NGG1P32494 702 aa6.51□□□□□ -1.37
NMD4YLR363C MTC2P34246 357 aa6.51□□□□□ -1.37
NMD4YLR363C TYS1P36421 394 aaKnown RBP6.51□□□□□ -1.37
NMD4YLR363C KTR4P38131 464 aa6.51□□□□□ -1.37
NMD4YLR363C ALY2P47029 1046 aa6.51□□□□□ -1.37
NMD4YLR363C HXT16P47185 567 aa6.51□□□□□ -1.37
NMD4YLR363C ERG5P54781 538 aa6.51□□□□□ -1.37
NMD4YLR363C KIN4Q01919 800 aa6.51□□□□□ -1.37
NMD4YLR363C PKH1Q03407 766 aa6.51□□□□□ -1.37
NMD4YLR363C USO1P25386 1790 aa6.51□□□□□ -1.37
NMD4YLR363C MSH2P25847 964 aa6.5□□□□□ -1.37
NMD4YLR363C SAK1P38990 1142 aa6.5□□□□□ -1.37
NMD4YLR363C MUS81Q04149 632 aaPredicted RBP6.5□□□□□ -1.37
NMD4YLR363C ERG4P25340 473 aa6.49□□□□□ -1.37
NMD4YLR363C STO1P34160 861 aaKnown RBP6.49□□□□□ -1.37
NMD4YLR363C RPP1P38786 293 aa6.49□□□□□ -1.37
NMD4YLR363C UGO1Q03327 502 aa6.49□□□□□ -1.37
NMD4YLR363C POB3Q04636 552 aaKnown RBP6.49□□□□□ -1.37
NMD4YLR363C PRP4P20053 465 aaKnown RBP6.48□□□□□ -1.37
NMD4YLR363C ZIP2P53061 704 aa6.48□□□□□ -1.37
NMD4YLR363C CDC9P04819 755 aa6.47□□□□□ -1.37
NMD4YLR363C MET6P05694 767 aaKnown RBP6.47□□□□□ -1.37
NMD4YLR363C MCD4P36051 919 aa6.47□□□□□ -1.37
NMD4YLR363C DSS1P39112 969 aa6.47□□□□□ -1.37
NMD4YLR363C CAF16P43569 289 aa6.47□□□□□ -1.37
NMD4YLR363C YLR040CQ07988 224 aa6.47□□□□□ -1.37
NMD4YLR363C IKI3Q06706 1349 aaKnown RBP6.47□□□□□ -1.37
NMD4YLR363C PDR5P33302 1511 aaKnown RBP6.46□□□□□ -1.37
NMD4YLR363C MET3P08536 511 aa6.46□□□□□ -1.38
NMD4YLR363C VBA3P25594 458 aa6.46□□□□□ -1.38
NMD4YLR363C PEX6P33760 1030 aa6.46□□□□□ -1.38
NMD4YLR363C SUL1P38359 859 aa6.46□□□□□ -1.38
NMD4YLR363C CHS7P38843 316 aa6.46□□□□□ -1.38
NMD4YLR363C PFA3P42836 336 aa6.46□□□□□ -1.38
NMD4YLR363C CRR1Q05790 422 aa6.46□□□□□ -1.38
NMD4YLR363C YLR415CO13578 112 aa6.45□□□□□ -1.38
NMD4YLR363C RPN10P38886 268 aaKnown RBP6.45□□□□□ -1.38
NMD4YLR363C FKH2P41813 862 aa6.45□□□□□ -1.38
NMD4YLR363C MTR3P48240 250 aaPredicted RBP6.45□□□□□ -1.38
NMD4YLR363C SNP1Q00916 300 aaPredicted RBP6.45□□□□□ -1.38
NMD4YLR363C CTF4Q01454 927 aa6.45□□□□□ -1.38
NMD4YLR363C RNT1Q02555 471 aa6.45□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 135.7 ms