RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W HUL4P40985 892 aa7.94□□□□□ -1.14
SNF7YLR025W NBP1P52919 319 aaPredicted RBP7.94□□□□□ -1.14
SNF7YLR025W FUS2Q05670 677 aa7.94□□□□□ -1.14
SNF7YLR025W ARP6Q12509 438 aa7.94□□□□□ -1.14
SNF7YLR025W PHO8P11491 566 aa7.93□□□□□ -1.14
SNF7YLR025W CHS2P14180 963 aa7.93□□□□□ -1.14
SNF7YLR025W MUD2P36084 527 aaKnown RBP7.93□□□□□ -1.14
SNF7YLR025W STV1P37296 890 aa7.93□□□□□ -1.14
SNF7YLR025W GRS1P38088 690 aaKnown RBP7.93□□□□□ -1.14
SNF7YLR025W LDH1P38139 375 aa7.93□□□□□ -1.14
SNF7YLR025W HXT8P40886 569 aa7.93□□□□□ -1.14
SNF7YLR025W MMM1P41800 426 aa7.93□□□□□ -1.14
SNF7YLR025W MDJ2P42834 146 aa7.93□□□□□ -1.14
SNF7YLR025W RPC17P47076 161 aa7.93□□□□□ -1.14
SNF7YLR025W LIF1P53150 421 aa7.93□□□□□ -1.14
SNF7YLR025W ORC4P54791 529 aa7.93□□□□□ -1.14
SNF7YLR025W NGL3Q03210 505 aa7.93□□□□□ -1.14
SNF7YLR025W TCO89Q08921 799 aa7.93□□□□□ -1.14
SNF7YLR025W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.92□□□□□ -1.14not detected
SNF7YLR025W KRS1P15180 591 aaKnown RBP7.92□□□□□ -1.14
SNF7YLR025W DBP5P20449 482 aaKnown RBP7.92□□□□□ -1.14
SNF7YLR025W PAP1P29468 568 aaKnown RBP7.92□□□□□ -1.14
SNF7YLR025W VPS35P34110 944 aa7.92□□□□□ -1.14
SNF7YLR025W YKL023WP36103 277 aaKnown RBP7.92□□□□□ -1.14
SNF7YLR025W DYS1P38791 387 aa7.92□□□□□ -1.14
SNF7YLR025W NDT80P38830 627 aa7.92□□□□□ -1.14
SNF7YLR025W KEL1P38853 1164 aaKnown RBP7.92□□□□□ -1.14
SNF7YLR025W PSY2P40164 858 aa7.92□□□□□ -1.14
SNF7YLR025W QDR2P40474 542 aa7.92□□□□□ -1.14
SNF7YLR025W SPR3P41901 512 aa7.92□□□□□ -1.14
SNF7YLR025W MIC19P43594 170 aa7.92□□□□□ -1.14
SNF7YLR025W KAP114P53067 1004 aa7.92□□□□□ -1.14
SNF7YLR025W VTI1Q04338 217 aa7.92□□□□□ -1.14
SNF7YLR025W YLR297WQ05899 129 aa7.92□□□□□ -1.14
SNF7YLR025W NOP6Q07623 225 aaKnown RBP7.92□□□□□ -1.14
SNF7YLR025W JIP3O13555 125 aa7.91□□□□□ -1.14
SNF7YLR025W CDC48P25694 835 aaKnown RBP7.91□□□□□ -1.14
SNF7YLR025W HXT1P32465 570 aa7.91□□□□□ -1.14
SNF7YLR025W SPP381P38282 291 aaPredicted RBP7.91□□□□□ -1.14
SNF7YLR025W ACO2P39533 789 aa7.91□□□□□ -1.14
SNF7YLR025W TIF4631P39935 952 aaKnown RBP7.91□□□□□ -1.14
SNF7YLR025W ULP2P40537 1034 aaPredicted RBP7.91□□□□□ -1.14
SNF7YLR025W MTO1P53070 669 aa7.91□□□□□ -1.14
SNF7YLR025W YGR021WP53212 290 aa7.91□□□□□ -1.14
SNF7YLR025W DIP5P53388 608 aa7.91□□□□□ -1.14
SNF7YLR025W SQS1P53866 767 aaKnown RBP7.91□□□□□ -1.14
SNF7YLR025W NCS2P53923 493 aaPredicted RBP7.91□□□□□ -1.14
SNF7YLR025W GYL1Q04322 720 aa7.91□□□□□ -1.14
SNF7YLR025W POB3Q04636 552 aaKnown RBP7.91□□□□□ -1.14
SNF7YLR025W STE23Q06010 1027 aa7.91□□□□□ -1.14
SNF7YLR025W GSC2P40989 1895 aa7.9□□□□□ -1.14
SNF7YLR025W TY1B-AO13527 1196 aaKnown RBP7.9□□□□□ -1.14
SNF7YLR025W PGK1P00560 416 aaKnown RBP7.9□□□□□ -1.14
SNF7YLR025W RAD18P10862 487 aa7.9□□□□□ -1.14
SNF7YLR025W TRK2P28584 889 aa7.9□□□□□ -1.14
SNF7YLR025W MCD4P36051 919 aa7.9□□□□□ -1.14
SNF7YLR025W YKR018CP36114 725 aa7.9□□□□□ -1.14
SNF7YLR025W SET5P38890 526 aaKnown RBP7.9□□□□□ -1.14
SNF7YLR025W SPC72P39723 622 aa7.9□□□□□ -1.14
SNF7YLR025W BTN2P53286 410 aa7.9□□□□□ -1.14
SNF7YLR025W ZPR1P53303 486 aaKnown RBP7.9□□□□□ -1.14
SNF7YLR025W NAM8Q00539 523 aaKnown RBP7.9□□□□□ -1.14
SNF7YLR025W URH1Q04179 340 aa7.9□□□□□ -1.14
SNF7YLR025W YMR018WQ04364 514 aa7.9□□□□□ -1.14
SNF7YLR025W UTP14Q04500 899 aaKnown RBP7.9□□□□□ -1.14
SNF7YLR025W PHM6Q05637 104 aa7.9□□□□□ -1.14
SNF7YLR025W CRD1Q07560 283 aa7.9□□□□□ -1.14
SNF7YLR025W TCP1P12612 559 aaKnown RBP7.89□□□□□ -1.15
SNF7YLR025W TUP1P16649 713 aa7.89□□□□□ -1.15
SNF7YLR025W ECM32P32644 1121 aaKnown RBP7.89□□□□□ -1.15
SNF7YLR025W UGA4P32837 571 aa7.89□□□□□ -1.15
SNF7YLR025W SQT1P35184 431 aa7.89□□□□□ -1.15
SNF7YLR025W BLI1P35727 113 aa7.89□□□□□ -1.15
SNF7YLR025W YKL050CP35736 922 aa7.89□□□□□ -1.15
SNF7YLR025W PHO88P38264 188 aaPredicted RBP7.89□□□□□ -1.15
SNF7YLR025W RGD1P38339 666 aa7.89□□□□□ -1.15
SNF7YLR025W TDA3P38758 523 aa7.89□□□□□ -1.15
SNF7YLR025W SDS3P40505 327 aa7.89□□□□□ -1.15
SNF7YLR025W FET4P40988 552 aa7.89□□□□□ -1.15
SNF7YLR025W YGL140CP53120 1219 aa7.89□□□□□ -1.15
SNF7YLR025W YML037CQ03703 340 aa7.89□□□□□ -1.15
SNF7YLR025W TY1A-MR1Q04215 440 aa7.89□□□□□ -1.15
SNF7YLR025W YDL057WQ07379 328 aa7.89□□□□□ -1.15
SNF7YLR025W RLP24Q07915 199 aaKnown RBP7.89□□□□□ -1.15
SNF7YLR025W RIO1Q12196 484 aaKnown RBP7.89□□□□□ -1.15
SNF7YLR025W SNF1P06782 633 aaKnown RBP7.88□□□□□ -1.15
SNF7YLR025W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
SNF7YLR025W GAR1P28007 205 aaKnown RBP7.88□□□□□ -1.15
SNF7YLR025W SAK1P38990 1142 aa7.88□□□□□ -1.15
SNF7YLR025W CTK3P46963 296 aaPredicted RBP7.88□□□□□ -1.15
SNF7YLR025W YGR117CP53270 476 aa7.88□□□□□ -1.15
SNF7YLR025W TIM8P57744 87 aa7.88□□□□□ -1.15
SNF7YLR025W VTC3Q02725 835 aa7.88□□□□□ -1.15
SNF7YLR025W ECI1Q05871 280 aa7.88□□□□□ -1.15
SNF7YLR025W CSR1Q06705 408 aaKnown RBP7.88□□□□□ -1.15
SNF7YLR025W FAL1Q12099 399 aaKnown RBP7.88□□□□□ -1.15
SNF7YLR025W RPP1AP05318 106 aaPredicted RBP7.87□□□□□ -1.15
SNF7YLR025W MSH1P25846 959 aa7.87□□□□□ -1.15
SNF7YLR025W RPC37P36121 282 aa7.87□□□□□ -1.15
SNF7YLR025W LAS1P36146 502 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms