RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	DOT6	P40059	670 aa	Known RBP	3.6	□□□□□ -1.83
SPE1	YKL184W	TY4A-J	P47023	414 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	SSL2	Q00578	843 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	UGO1	Q03327	502 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	CTK1	Q03957	528 aa	Known RBP	3.6	□□□□□ -1.83
SPE1	YKL184W	NHX1	Q04121	633 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	POB3	Q04636	552 aa	Known RBP	3.6	□□□□□ -1.83
SPE1	YKL184W	IRC10	Q08118	586 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	SGO1	Q08490	590 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	IRC13	Q08630	104 aa		3.6	□□□□□ -1.83
SPE1	YKL184W	CDC9	P04819	755 aa		3.59	□□□□□ -1.84
SPE1	YKL184W	MET6	P05694	767 aa	Known RBP	3.59	□□□□□ -1.84
SPE1	YKL184W	CIT2	P08679	460 aa		3.59	□□□□□ -1.84
SPE1	YKL184W	PEX6	P33760	1030 aa		3.59	□□□□□ -1.84
SPE1	YKL184W	MTH1	P35198	433 aa		3.59	□□□□□ -1.84
SPE1	YKL184W	CBR1	P38626	284 aa	Known RBP	3.59	□□□□□ -1.84
SPE1	YKL184W	PCL5	P38794	229 aa		3.59	□□□□□ -1.84
SPE1	YKL184W	FMP52	P40008	231 aa		3.59	□□□□□ -1.84
SPE1	YKL184W	YAP1802	P53309	568 aa		3.59	□□□□□ -1.84
SPE1	YKL184W	GND2	P53319	492 aa		3.59	□□□□□ -1.84
SPE1	YKL184W	FPR4	Q06205	392 aa	Predicted RBP	3.59	□□□□□ -1.84
SPE1	YKL184W	MSH2	P25847	964 aa		3.58	□□□□□ -1.84
SPE1	YKL184W	TRZ1	P36159	838 aa	Predicted RBP	3.58	□□□□□ -1.84
SPE1	YKL184W	SDS3	P40505	327 aa		3.58	□□□□□ -1.84
SPE1	YKL184W	MAL11	P53048	616 aa		3.58	□□□□□ -1.84
SPE1	YKL184W	ASM4	Q05166	528 aa		3.58	□□□□□ -1.84
SPE1	YKL184W	YDR338C	Q05497	695 aa		3.58	□□□□□ -1.84
SPE1	YKL184W	RPN7	Q06103	429 aa	Known RBP	3.58	□□□□□ -1.84
SPE1	YKL184W	GFA1	P14742	717 aa	Known RBP	3.57	□□□□□ -1.84
SPE1	YKL184W	HOG1	P32485	435 aa		3.57	□□□□□ -1.84
SPE1	YKL184W	APL2	P36000	726 aa	Predicted RBP	3.57	□□□□□ -1.84
SPE1	YKL184W	MIP6	P38760	659 aa	Known RBP	3.57	□□□□□ -1.84
SPE1	YKL184W	BCD1	P38772	366 aa		3.57	□□□□□ -1.84
SPE1	YKL184W	QRI1	P43123	477 aa	Known RBP	3.57	□□□□□ -1.84
SPE1	YKL184W	UBC11	P52492	156 aa		3.57	□□□□□ -1.84
SPE1	YKL184W	TEL2	P53038	688 aa		3.57	□□□□□ -1.84
SPE1	YKL184W	TEX1	P53851	422 aa	Known RBP	3.57	□□□□□ -1.84
SPE1	YKL184W	GPR1	Q12361	961 aa		3.57	□□□□□ -1.84
SPE1	YKL184W	SRD1	P09007	221 aa		3.56	□□□□□ -1.84
SPE1	YKL184W	KIN3	P22209	435 aa		3.56	□□□□□ -1.84
SPE1	YKL184W	CCT3	P39077	534 aa	Known RBP	3.56	□□□□□ -1.84
SPE1	YKL184W	HOS4	P40480	1083 aa		3.56	□□□□□ -1.84
SPE1	YKL184W	REC102	Q02721	264 aa		3.56	□□□□□ -1.84
SPE1	YKL184W	MCM21	Q06675	368 aa		3.56	□□□□□ -1.84
SPE1	YKL184W	MRH1	Q12117	320 aa	Predicted RBP	3.56	□□□□□ -1.84
SPE1	YKL184W	YLR149C	Q99296	730 aa		3.56	□□□□□ -1.84
SPE1	YKL184W	YTA7	P40340	1379 aa		3.56	□□□□□ -1.84
SPE1	YKL184W	RAD18	P10862	487 aa		3.55	□□□□□ -1.84
SPE1	YKL184W	HCA4	P20448	770 aa	Known RBP	3.55	□□□□□ -1.84
SPE1	YKL184W	ADE2	P21264	571 aa	Known RBP	3.55	□□□□□ -1.84
SPE1	YKL184W	MVD1	P32377	396 aa	Known RBP	3.55	□□□□□ -1.84
SPE1	YKL184W	YEL1	P34225	687 aa		3.55	□□□□□ -1.84
SPE1	YKL184W	BAP3	P41815	604 aa		3.55	□□□□□ -1.84
SPE1	YKL184W	ARG5,6	Q01217	863 aa		3.55	□□□□□ -1.84
SPE1	YKL184W	COG8	Q04632	607 aa		3.55	□□□□□ -1.84
SPE1	YKL184W	DIA2	Q08496	732 aa	Predicted RBP	3.55	□□□□□ -1.84
SPE1	YKL184W	YKL033W-A	Q86ZR7	236 aa		3.55	□□□□□ -1.84
SPE1	YKL184W	Q0142	Q9ZZW4	58 aa		3.55	□□□□□ -1.84
SPE1	YKL184W	MEF1	P25039	761 aa		3.54	□□□□□ -1.84
SPE1	YKL184W	DMC1	P25453	334 aa		3.54	□□□□□ -1.84
SPE1	YKL184W	PPG1	P32838	368 aa		3.54	□□□□□ -1.84
SPE1	YKL184W	YKR018C	P36114	725 aa		3.54	□□□□□ -1.84
SPE1	YKL184W	YKR051W	P36142	418 aa		3.54	□□□□□ -1.84
SPE1	YKL184W	YHR112C	P38716	378 aa		3.54	□□□□□ -1.84
SPE1	YKL184W	PCL10	P53124	433 aa		3.54	□□□□□ -1.84
SPE1	YKL184W	NUP60	P39705	539 aa		3.53	□□□□□ -1.84
SPE1	YKL184W	MTL1	P53214	551 aa		3.53	□□□□□ -1.84
SPE1	YKL184W	GIN4	Q12263	1142 aa		3.53	□□□□□ -1.84
SPE1	YKL184W	CLF1	Q12309	687 aa	Predicted RBP	3.53	□□□□□ -1.84
SPE1	YKL184W	SFP1	P32432	683 aa		3.53	□□□□□ -1.85
SPE1	YKL184W	HIR1	P32479	840 aa		3.53	□□□□□ -1.85
SPE1	YKL184W	SFB3	P38810	929 aa		3.53	□□□□□ -1.85
SPE1	YKL184W	CTR1	P49573	406 aa		3.53	□□□□□ -1.85
SPE1	YKL184W	UBC9	P50623	157 aa	Predicted RBP	3.53	□□□□□ -1.85
SPE1	YKL184W	COX18	P53239	316 aa		3.53	□□□□□ -1.85
SPE1	YKL184W	GPD1	Q00055	391 aa	Known RBP	3.53	□□□□□ -1.85
SPE1	YKL184W	PYC1	P11154	1178 aa	Known RBP	3.52	□□□□□ -1.85
SPE1	YKL184W	GLG1	P36143	616 aa		3.52	□□□□□ -1.85
SPE1	YKL184W	TDP1	P38319	544 aa		3.52	□□□□□ -1.85
SPE1	YKL184W	FMO1	P38866	432 aa		3.52	□□□□□ -1.85
SPE1	YKL184W	YJL206C	P39529	758 aa		3.52	□□□□□ -1.85
SPE1	YKL184W	ARG2	P40360	574 aa		3.52	□□□□□ -1.85
SPE1	YKL184W	NDC80	P40460	691 aa		3.52	□□□□□ -1.85
SPE1	YKL184W	BFA1	P47113	574 aa		3.52	□□□□□ -1.85
SPE1	YKL184W	PAN2	P53010	1115 aa	Predicted RBP	3.52	□□□□□ -1.85
SPE1	YKL184W	SMX3	P54999	86 aa	Predicted RBP	3.52	□□□□□ -1.85
SPE1	YKL184W	NTG2	Q08214	380 aa		3.52	□□□□□ -1.85
SPE1	YKL184W	SFL1	P20134	766 aa		3.51	□□□□□ -1.85
SPE1	YKL184W	PCL2	P25693	308 aa		3.51	□□□□□ -1.85
SPE1	YKL184W	YKR075C	P36155	307 aa		3.51	□□□□□ -1.85
SPE1	YKL184W	APN2	P38207	520 aa		3.51	□□□□□ -1.85
SPE1	YKL184W	YIL166C	P40445	542 aa		3.51	□□□□□ -1.85
SPE1	YKL184W	VPS73	P53142	486 aa	Known RBP	3.51	□□□□□ -1.85
SPE1	YKL184W	YML122C	Q03207	126 aa		3.51	□□□□□ -1.85
SPE1	YKL184W	ATG33	Q06485	197 aa		3.51	□□□□□ -1.85
SPE1	YKL184W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
SPE1	YKL184W	ZRT2	Q12436	422 aa		3.51	□□□□□ -1.85
SPE1	YKL184W	SIR3	P06701	978 aa		3.5	□□□□□ -1.85
SPE1	YKL184W	RNR1	P21524	888 aa	Known RBP	3.5	□□□□□ -1.85
SPE1	YKL184W	SEC15	P22224	910 aa		3.5	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 130.8 ms