RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKA1	YIL035C	MDM12	Q92328	271 aa		4.74	□□□□□ -1.65
CKA1	YIL035C	HIR1	P32479	840 aa		4.73	□□□□□ -1.65
CKA1	YIL035C	YKL091C	P33324	310 aa	Known RBP	4.73	□□□□□ -1.65
CKA1	YIL035C	ATF1	P40353	525 aa		4.73	□□□□□ -1.65
CKA1	YIL035C	SNM1	P40993	198 aa		4.73	□□□□□ -1.65
CKA1	YIL035C	PRP31	P49704	494 aa	Predicted RBP	4.73	□□□□□ -1.65
CKA1	YIL035C	TEL2	P53038	688 aa		4.73	□□□□□ -1.65
CKA1	YIL035C	Q0142	Q9ZZW4	58 aa		4.73	□□□□□ -1.65
CKA1	YIL035C	CDC9	P04819	755 aa		4.72	□□□□□ -1.65
CKA1	YIL035C	ADE2	P21264	571 aa	Known RBP	4.72	□□□□□ -1.65
CKA1	YIL035C	MIH1	P23748	554 aa		4.72	□□□□□ -1.65
CKA1	YIL035C	MEF1	P25039	761 aa		4.72	□□□□□ -1.65
CKA1	YIL035C	TDP1	P38319	544 aa		4.72	□□□□□ -1.65
CKA1	YIL035C	YHR112C	P38716	378 aa		4.72	□□□□□ -1.65
CKA1	YIL035C	BNA2	P47125	453 aa		4.72	□□□□□ -1.65
CKA1	YIL035C	MTL1	P53214	551 aa		4.72	□□□□□ -1.65
CKA1	YIL035C	SIR3	P06701	978 aa		4.71	□□□□□ -1.66
CKA1	YIL035C	STO1	P34160	861 aa	Known RBP	4.71	□□□□□ -1.66
CKA1	YIL035C	LYS9	P38999	446 aa		4.71	□□□□□ -1.66
CKA1	YIL035C	YBP2	P53169	641 aa		4.71	□□□□□ -1.66
CKA1	YIL035C	APL2	P36000	726 aa	Predicted RBP	4.7	□□□□□ -1.66
CKA1	YIL035C	CBR1	P38626	284 aa	Known RBP	4.7	□□□□□ -1.66
CKA1	YIL035C	FMO1	P38866	432 aa		4.7	□□□□□ -1.66
CKA1	YIL035C	CCT3	P39077	534 aa	Known RBP	4.7	□□□□□ -1.66
CKA1	YIL035C	NUP82	P40368	713 aa		4.7	□□□□□ -1.66
CKA1	YIL035C	YFL052W	P43551	465 aa		4.7	□□□□□ -1.66
CKA1	YIL035C	CAF16	P43569	289 aa		4.7	□□□□□ -1.66
CKA1	YIL035C	VPS73	P53142	486 aa	Known RBP	4.7	□□□□□ -1.66
CKA1	YIL035C	SMX3	P54999	86 aa	Predicted RBP	4.7	□□□□□ -1.66
CKA1	YIL035C	SSL2	Q00578	843 aa		4.7	□□□□□ -1.66
CKA1	YIL035C	ARG5,6	Q01217	863 aa		4.7	□□□□□ -1.66
CKA1	YIL035C	RGC1	Q06108	1083 aa	Known RBP	4.7	□□□□□ -1.66
CKA1	YIL035C	KIN3	P22209	435 aa		4.69	□□□□□ -1.66
CKA1	YIL035C	ERG6	P25087	383 aa	Known RBP	4.69	□□□□□ -1.66
CKA1	YIL035C	CUE2	P36075	443 aa	Known RBP	4.69	□□□□□ -1.66
CKA1	YIL035C	YKR051W	P36142	418 aa		4.69	□□□□□ -1.66
CKA1	YIL035C	MIP6	P38760	659 aa	Known RBP	4.69	□□□□□ -1.66
CKA1	YIL035C	TAH11	P47112	604 aa		4.69	□□□□□ -1.66
CKA1	YIL035C	NPY1	P53164	384 aa		4.69	□□□□□ -1.66
CKA1	YIL035C	SNP1	Q00916	300 aa	Predicted RBP	4.69	□□□□□ -1.66
CKA1	YIL035C	LGE1	Q02796	332 aa	Known RBP	4.69	□□□□□ -1.66
CKA1	YIL035C	HRP1	Q99383	534 aa	Known RBP	4.69	□□□□□ -1.66
CKA1	YIL035C	GFA1	P14742	717 aa	Known RBP	4.68	□□□□□ -1.66
CKA1	YIL035C	VBA3	P25594	458 aa		4.68	□□□□□ -1.66
CKA1	YIL035C	RPN10	P38886	268 aa	Known RBP	4.68	□□□□□ -1.66
CKA1	YIL035C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected
CKA1	YIL035C	REV7	P38927	245 aa		4.68	□□□□□ -1.66
CKA1	YIL035C	PAN2	P53010	1115 aa	Predicted RBP	4.68	□□□□□ -1.66
CKA1	YIL035C	ORC4	P54791	529 aa		4.68	□□□□□ -1.66
CKA1	YIL035C	MCM21	Q06675	368 aa		4.68	□□□□□ -1.66
CKA1	YIL035C	CDC43	P18898	376 aa		4.67	□□□□□ -1.66
CKA1	YIL035C	DSS1	P39112	969 aa		4.67	□□□□□ -1.66
CKA1	YIL035C	CCT7	P42943	550 aa	Known RBP	4.67	□□□□□ -1.66
CKA1	YIL035C	YAP1802	P53309	568 aa		4.67	□□□□□ -1.66
CKA1	YIL035C	CTK1	Q03957	528 aa	Known RBP	4.67	□□□□□ -1.66
CKA1	YIL035C	YLR125W	Q12138	136 aa		4.67	□□□□□ -1.66
CKA1	YIL035C	YKL033W-A	Q86ZR7	236 aa		4.67	□□□□□ -1.66
CKA1	YIL035C	BNR1	P40450	1375 aa		4.66	□□□□□ -1.66
CKA1	YIL035C	SRD1	P09007	221 aa		4.66	□□□□□ -1.66
CKA1	YIL035C	PYC1	P11154	1178 aa	Known RBP	4.66	□□□□□ -1.66
CKA1	YIL035C	PHO8	P11491	566 aa		4.66	□□□□□ -1.66
CKA1	YIL035C	MSH2	P25847	964 aa		4.66	□□□□□ -1.66
CKA1	YIL035C	MVD1	P32377	396 aa	Known RBP	4.66	□□□□□ -1.66
CKA1	YIL035C	TRZ1	P36159	838 aa	Predicted RBP	4.66	□□□□□ -1.66
CKA1	YIL035C	UBS1	P38290	277 aa		4.66	□□□□□ -1.66
CKA1	YIL035C	SFB3	P38810	929 aa		4.66	□□□□□ -1.66
CKA1	YIL035C	NUP60	P39705	539 aa		4.66	□□□□□ -1.66
CKA1	YIL035C	HMO1	Q03973	246 aa	Known RBP	4.66	□□□□□ -1.66
CKA1	YIL035C	TAF3	Q12297	353 aa		4.66	□□□□□ -1.66
CKA1	YIL035C	MET6	P05694	767 aa	Known RBP	4.65	□□□□□ -1.67
CKA1	YIL035C	HCA4	P20448	770 aa	Known RBP	4.65	□□□□□ -1.67
CKA1	YIL035C	GSY1	P23337	708 aa		4.65	□□□□□ -1.67
CKA1	YIL035C	HOG1	P32485	435 aa		4.65	□□□□□ -1.67
CKA1	YIL035C	YKR018C	P36114	725 aa		4.65	□□□□□ -1.67
CKA1	YIL035C	YJL206C	P39529	758 aa		4.65	□□□□□ -1.67
CKA1	YIL035C	GET2	P40056	285 aa		4.65	□□□□□ -1.67
CKA1	YIL035C	NDC80	P40460	691 aa		4.65	□□□□□ -1.67
CKA1	YIL035C	FHN1	P53279	174 aa		4.65	□□□□□ -1.67
CKA1	YIL035C	ARP4	P80428	489 aa		4.65	□□□□□ -1.67
CKA1	YIL035C	NHX1	Q04121	633 aa		4.65	□□□□□ -1.67
CKA1	YIL035C	RPN7	Q06103	429 aa	Known RBP	4.65	□□□□□ -1.67
CKA1	YIL035C	PEX2	P32800	271 aa		4.64	□□□□□ -1.67
CKA1	YIL035C	PPZ2	P33329	710 aa		4.64	□□□□□ -1.67
CKA1	YIL035C	APT2	P36973	181 aa		4.64	□□□□□ -1.67
CKA1	YIL035C	HSL7	P38274	827 aa		4.64	□□□□□ -1.67
CKA1	YIL035C	GID8	P40208	455 aa		4.64	□□□□□ -1.67
CKA1	YIL035C	PCL10	P53124	433 aa		4.64	□□□□□ -1.67
CKA1	YIL035C	NDJ1	Q12366	352 aa		4.64	□□□□□ -1.67
CKA1	YIL035C	CIT2	P08679	460 aa		4.63	□□□□□ -1.67
CKA1	YIL035C	RNR1	P21524	888 aa	Known RBP	4.63	□□□□□ -1.67
CKA1	YIL035C	PHO11	P35842	467 aa		4.63	□□□□□ -1.67
CKA1	YIL035C	FLO10	P36170	1169 aa		4.63	□□□□□ -1.67
CKA1	YIL035C	PHO12	P38693	467 aa		4.63	□□□□□ -1.67
CKA1	YIL035C	RIX1	P38883	763 aa	Predicted RBP	4.63	□□□□□ -1.67
CKA1	YIL035C	UBC9	P50623	157 aa	Predicted RBP	4.63	□□□□□ -1.67
CKA1	YIL035C	LEE1	Q02799	301 aa	Known RBP	4.63	□□□□□ -1.67
CKA1	YIL035C	MLH3	Q12083	715 aa		4.63	□□□□□ -1.67
CKA1	YIL035C	RAD18	P10862	487 aa		4.62	□□□□□ -1.67
CKA1	YIL035C	DMC1	P25453	334 aa		4.62	□□□□□ -1.67
CKA1	YIL035C	THI4	P32318	326 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms