RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W ABP140Q08641 628 aaKnown RBP8.32□□□□□ -1.08
YRF1-3YGR296W DAS2Q12084 232 aa8.32□□□□□ -1.08
YRF1-3YGR296W KRS1P15180 591 aaKnown RBP8.31□□□□□ -1.08
YRF1-3YGR296W YKR078WP36158 585 aaKnown RBP8.31□□□□□ -1.08
YRF1-3YGR296W HAL5P38970 855 aaKnown RBP8.31□□□□□ -1.08
YRF1-3YGR296W TOM22P49334 152 aa8.31□□□□□ -1.08
YRF1-3YGR296W SRN2Q99176 213 aa8.31□□□□□ -1.08
YRF1-3YGR296W NMT1P14743 455 aa8.31□□□□□ -1.08
YRF1-3YGR296W IRE1P32361 1115 aa8.31□□□□□ -1.08
YRF1-3YGR296W KTR4P38131 464 aa8.31□□□□□ -1.08
YRF1-3YGR296W RPT2P40327 437 aaKnown RBP8.31□□□□□ -1.08
YRF1-3YGR296W YGR111WP53265 400 aa8.31□□□□□ -1.08
YRF1-3YGR296W LSC2P53312 427 aa8.31□□□□□ -1.08
YRF1-3YGR296W RRP15Q06511 250 aaPredicted RBP8.31□□□□□ -1.08
YRF1-3YGR296W NAT1P12945 854 aaKnown RBP8.31□□□□□ -1.08
YRF1-3YGR296W SSO1P32867 290 aa8.31□□□□□ -1.08
YRF1-3YGR296W KHA1P40309 873 aa8.31□□□□□ -1.08
YRF1-3YGR296W TY3A-GQ12173 290 aa8.31□□□□□ -1.08
YRF1-3YGR296W TY3A-IQ99219 290 aa8.31□□□□□ -1.08
YRF1-3YGR296W VPS1P21576 704 aaKnown RBP8.31□□□□□ -1.08
YRF1-3YGR296W SSO2P39926 295 aa8.31□□□□□ -1.08
YRF1-3YGR296W YEL025CP39991 1188 aa8.31□□□□□ -1.08
YRF1-3YGR296W ATG32P40458 529 aa8.31□□□□□ -1.08
YRF1-3YGR296W HLJ1P48353 224 aa8.31□□□□□ -1.08
YRF1-3YGR296W PPN1Q04119 674 aa8.31□□□□□ -1.08
YRF1-3YGR296W THI21Q08975 551 aa8.31□□□□□ -1.08
YRF1-3YGR296W SWE1P32944 819 aa8.3□□□□□ -1.08
YRF1-3YGR296W UPF3P48412 387 aaKnown RBP8.3□□□□□ -1.08
YRF1-3YGR296W TRF5P48561 642 aaKnown RBP8.3□□□□□ -1.08
YRF1-3YGR296W FPK1P53739 893 aa8.3□□□□□ -1.08
YRF1-3YGR296W RAD18P10862 487 aa8.3□□□□□ -1.08
YRF1-3YGR296W PBP2P38151 413 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
YRF1-3YGR296W ROG3P43602 733 aa8.3□□□□□ -1.08
YRF1-3YGR296W SKY1Q03656 742 aa8.3□□□□□ -1.08
YRF1-3YGR296W JJJ3P47138 172 aa8.3□□□□□ -1.08
YRF1-3YGR296W YGL138CP53122 345 aa8.3□□□□□ -1.08
YRF1-3YGR296W VTA1Q06263 330 aa8.3□□□□□ -1.08
YRF1-3YGR296W ISA1Q07821 250 aaPredicted RBP8.3□□□□□ -1.08
YRF1-3YGR296W YPL225WQ08971 146 aaKnown RBP8.3□□□□□ -1.08
YRF1-3YGR296W COX6P00427 148 aa8.3□□□□□ -1.08
YRF1-3YGR296W SNA3P14359 133 aa8.3□□□□□ -1.08
YRF1-3YGR296W CIN4P39110 191 aa8.3□□□□□ -1.08
YRF1-3YGR296W NPR2P39923 615 aa8.3□□□□□ -1.08
YRF1-3YGR296W ECI1Q05871 280 aa8.3□□□□□ -1.08
YRF1-3YGR296W YDR056CQ12025 205 aa8.3□□□□□ -1.08
YRF1-3YGR296W KIN1P13185 1064 aa8.29□□□□□ -1.08
YRF1-3YGR296W MIP1P15801 1254 aa8.29□□□□□ -1.08
YRF1-3YGR296W YME1P32795 747 aa8.29□□□□□ -1.08
YRF1-3YGR296W MMS4P38257 691 aa8.29□□□□□ -1.08
YRF1-3YGR296W SSZ1P38788 538 aaKnown RBP8.29□□□□□ -1.08
YRF1-3YGR296W TY1B-NL2Q99337 1749 aaKnown RBP8.29□□□□□ -1.08
YRF1-3YGR296W PAT1P25644 796 aaKnown RBP8.29□□□□□ -1.08
YRF1-3YGR296W BUD14P27637 709 aa8.29□□□□□ -1.08
YRF1-3YGR296W NOP9P47077 666 aaKnown RBP8.29□□□□□ -1.08
YRF1-3YGR296W RTT102P53330 157 aa8.29□□□□□ -1.08
YRF1-3YGR296W PRM6Q04705 352 aa8.29□□□□□ -1.08
YRF1-3YGR296W RVS161P25343 265 aaKnown RBP8.29□□□□□ -1.08
YRF1-3YGR296W RTG2P32608 588 aaKnown RBP8.29□□□□□ -1.08
YRF1-3YGR296W YKR023WP36119 530 aaKnown RBP8.29□□□□□ -1.08
YRF1-3YGR296W INA17Q02888 182 aa8.29□□□□□ -1.08
YRF1-3YGR296W YLR407WQ06070 228 aa8.29□□□□□ -1.08
YRF1-3YGR296W DNF3Q12674 1656 aa8.29□□□□□ -1.08
YRF1-3YGR296W ERP6P53198 216 aa8.29□□□□□ -1.08
YRF1-3YGR296W ALG11P53954 548 aaKnown RBP8.29□□□□□ -1.08
YRF1-3YGR296W GYL1Q04322 720 aa8.29□□□□□ -1.08
YRF1-3YGR296W VPH1P32563 840 aaKnown RBP8.29□□□□□ -1.08
YRF1-3YGR296W YBL055CP34220 418 aaPredicted RBP8.29□□□□□ -1.08
YRF1-3YGR296W TFG1P41895 735 aaPredicted RBP8.29□□□□□ -1.08
YRF1-3YGR296W RSC4Q02206 625 aa8.29□□□□□ -1.08
YRF1-3YGR296W TPO1Q07824 586 aa8.29□□□□□ -1.08
YRF1-3YGR296W FRA1Q07825 749 aa8.29□□□□□ -1.08
YRF1-3YGR296W PHO13P19881 312 aa8.28□□□□□ -1.08
YRF1-3YGR296W LAS1P36146 502 aaPredicted RBP8.28□□□□□ -1.08
YRF1-3YGR296W KTR3P38130 404 aaPredicted RBP8.28□□□□□ -1.08
YRF1-3YGR296W UBP7P40453 1071 aa8.28□□□□□ -1.08
YRF1-3YGR296W MIC19P43594 170 aa8.28□□□□□ -1.08
YRF1-3YGR296W DIP5P53388 608 aa8.28□□□□□ -1.08
YRF1-3YGR296W PAB1P04147 577 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
YRF1-3YGR296W SEC1P30619 724 aaKnown RBP8.28□□□□□ -1.08
YRF1-3YGR296W PRO3P32263 286 aaKnown RBP8.28□□□□□ -1.08
YRF1-3YGR296W GLC3P32775 704 aa8.28□□□□□ -1.08
YRF1-3YGR296W YGR125WP53273 1036 aa8.28□□□□□ -1.08
YRF1-3YGR296W ATG20Q07528 640 aa8.28□□□□□ -1.08
YRF1-3YGR296W RRP36Q12481 300 aaPredicted RBP8.28□□□□□ -1.08
YRF1-3YGR296W ADH4P10127 382 aa8.28□□□□□ -1.08
YRF1-3YGR296W GCD2P12754 651 aaPredicted RBP8.28□□□□□ -1.08
YRF1-3YGR296W YMR134WP40207 237 aa8.28□□□□□ -1.08
YRF1-3YGR296W MCM6P53091 1017 aaKnown RBP8.28□□□□□ -1.08
YRF1-3YGR296W RLI1Q03195 608 aaKnown RBP8.28□□□□□ -1.08
YRF1-3YGR296W ARP6Q12509 438 aa8.28□□□□□ -1.08
YRF1-3YGR296W TVP38P36164 337 aa8.28□□□□□ -1.08
YRF1-3YGR296W PFD1P46988 109 aa8.28□□□□□ -1.08
YRF1-3YGR296W SHR3Q02774 210 aa8.28□□□□□ -1.08
YRF1-3YGR296W MEF1P25039 761 aa8.27□□□□□ -1.08
YRF1-3YGR296W NUF2P33895 451 aa8.27□□□□□ -1.08
YRF1-3YGR296W CRN1Q06440 651 aa8.27□□□□□ -1.08
YRF1-3YGR296W SUE1Q06524 206 aa8.27□□□□□ -1.08
YRF1-3YGR296W FOB1O13329 566 aa8.27□□□□□ -1.09
YRF1-3YGR296W OTU2P38747 307 aaKnown RBP8.27□□□□□ -1.09
YRF1-3YGR296W ETP1P38748 585 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 6.9 ms