RNA–Protein interactions for RNA: YGR100W

MDR1, Transcript of Cytoplasmic GTPase-activating protein, yeast

Gene MDR1, Length 2,853 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MDR1	YGR100W	CWC25	P53854	179 aa	Known RBP	4.8	□□□□□ -1.64
MDR1	YGR100W	TBF1	Q02457	562 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	RPN4	Q03465	531 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	GLO2	Q05584	274 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	DON1	Q05610	365 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	YRM1	Q12340	786 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	TRM1	P15565	570 aa	Known RBP	4.8	□□□□□ -1.64
MDR1	YGR100W	YJU2	P28320	278 aa	Predicted RBP	4.8	□□□□□ -1.64
MDR1	YGR100W	IRE1	P32361	1115 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	SPC42	P36094	363 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	ECM21	P38167	1117 aa	Known RBP	4.8	□□□□□ -1.64
MDR1	YGR100W	VHR2	P40041	505 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	GPD2	P41911	440 aa	Known RBP	4.8	□□□□□ -1.64
MDR1	YGR100W	YNL320W	P42840	284 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	EPL1	P43572	832 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	MDV1	P47025	714 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	GPI8	P49018	411 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	MDR1	P53258	950 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	IPI3	P53877	555 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	VTI1	Q04338	217 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	RRN11	Q04712	507 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	MCM21	Q06675	368 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	YOR352W	Q08816	343 aa		4.8	□□□□□ -1.64
MDR1	YGR100W	URB1	P34241	1764 aa	Known RBP	4.8	□□□□□ -1.64
MDR1	YGR100W	UTP10	P42945	1769 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	HXK1	P04806	485 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	ALG1	P16661	449 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	NIP1	P32497	812 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	SLX5	P32828	619 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	RPT1	P33299	467 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	AST1	P35183	429 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	YHL012W	P38709	493 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	YHL017W	P38745	532 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	SPO22	P40511	975 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	STB4	P50104	949 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	PIB2	P53191	635 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	YGR016W	P53209	190 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	UBP2	Q01476	1272 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	YML020W	Q03722	664 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	SEC10	Q06245	871 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	SYO1	Q07395	620 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	PEX15	Q08215	383 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	RRP36	Q12481	300 aa	Predicted RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	MSB1	P21339	1137 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	MCM3	P24279	971 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	EFT1	P32324	842 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	PPH3	P32345	308 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	RCN1	P36054	211 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	RFT1	P38206	574 aa	Predicted RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	PFF1	P38244	976 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	LSM12	P38828	187 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	YJL181W	P46987	611 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	YNL040W	P53960	456 aa	Predicted RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	HER2	Q03557	464 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	UTP5	Q04177	643 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	TAF11	Q04226	346 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	TAP42	Q04372	366 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	SVF1	Q05515	481 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	SIL1	Q08199	421 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	SMC5	Q08204	1093 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	ATG29	Q12092	213 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	NCA2	Q12374	616 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	APM4	Q99186	491 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	POM152	P39685	1337 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	YAK1	P14680	807 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	PDC6	P26263	563 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	SMY1	P32364	656 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	YKR078W	P36158	585 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	SMC2	P38989	1170 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	ZRG8	P40021	1076 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	YER137C	P40083	148 aa	Known RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	IRC6	P43615	237 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	YKE2	P52553	114 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	NUP84	P52891	726 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	KAP114	P53067	1004 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	TOF1	P53840	1238 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	PKH3	Q03306	898 aa	Predicted RBP	4.79	□□□□□ -1.64
MDR1	YGR100W	PNP1	Q05788	311 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	DXO1	Q06349	442 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	SGT1	Q08446	395 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	RSA1	Q08932	381 aa		4.79	□□□□□ -1.64
MDR1	YGR100W	CMD1	P06787	147 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	HSF1	P10961	833 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	SEC63	P14906	663 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	SRV2	P17555	526 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	URA1	P28272	314 aa	Predicted RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	ACH1	P32316	526 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	YKL050C	P35736	922 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	YKR015C	P36111	568 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	PAM1	P37304	830 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	ATP3	P38077	311 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	MAK5	P38112	773 aa	Predicted RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
MDR1	YGR100W	ZRG17	P53735	605 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	SWP1	Q02795	286 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	EMI2	Q04409	500 aa	Known RBP	4.78	□□□□□ -1.64
MDR1	YGR100W	DYN3	Q04949	312 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	YPR022C	Q12139	1133 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	TIP41	Q12199	356 aa		4.78	□□□□□ -1.64
MDR1	YGR100W	SFL1	P20134	766 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms