RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeastyeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC55YGL190C SUT2Q12286 268 aa3.7□□□□□ -1.82
CDC55YGL190C YLR149CQ99296 730 aa3.7□□□□□ -1.82
CDC55YGL190C NGG1P32494 702 aa3.69□□□□□ -1.82
CDC55YGL190C BCD1P38772 366 aa3.69□□□□□ -1.82
CDC55YGL190C BAP3P41815 604 aa3.69□□□□□ -1.82
CDC55YGL190C MTR3P48240 250 aaPredicted RBP3.69□□□□□ -1.82
CDC55YGL190C RTS3P53289 263 aa3.69□□□□□ -1.82
CDC55YGL190C RGC1Q06108 1083 aaKnown RBP3.69□□□□□ -1.82
CDC55YGL190C MDM12Q92328 271 aa3.69□□□□□ -1.82
CDC55YGL190C Q0142Q9ZZW4 58 aa3.69□□□□□ -1.82
CDC55YGL190C CDC9P04819 755 aa3.68□□□□□ -1.82
CDC55YGL190C TSR4P25040 408 aa3.68□□□□□ -1.82
CDC55YGL190C ATG36P46983 293 aa3.68□□□□□ -1.82
CDC55YGL190C ZDS1P50111 915 aaKnown RBP3.68□□□□□ -1.82
CDC55YGL190C TIM44Q01852 431 aa3.68□□□□□ -1.82
CDC55YGL190C MRH1Q12117 320 aaPredicted RBP3.68□□□□□ -1.82
CDC55YGL190C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
CDC55YGL190C YOR131CQ12486 218 aa3.68□□□□□ -1.82
CDC55YGL190C PCL5P38794 229 aa3.68□□□□□ -1.82
CDC55YGL190C LYS9P38999 446 aa3.68□□□□□ -1.82
CDC55YGL190C NUP82P40368 713 aa3.68□□□□□ -1.82
CDC55YGL190C RPS0BP46654 252 aaKnown RBP3.68□□□□□ -1.82
CDC55YGL190C DAS1P47005 663 aa3.68□□□□□ -1.82
CDC55YGL190C UBC11P52492 156 aa3.68□□□□□ -1.82
CDC55YGL190C HBT1Q07653 1046 aaKnown RBP3.68□□□□□ -1.82
CDC55YGL190C ADE2P21264 571 aaKnown RBP3.67□□□□□ -1.82
CDC55YGL190C HIR1P32479 840 aa3.67□□□□□ -1.82
CDC55YGL190C YBR259WP38338 688 aa3.67□□□□□ -1.82
CDC55YGL190C ECM1P39715 212 aa3.67□□□□□ -1.82
CDC55YGL190C NUG1P40010 520 aaKnown RBP3.67□□□□□ -1.82
CDC55YGL190C POB3Q04636 552 aaKnown RBP3.67□□□□□ -1.82
CDC55YGL190C ATG11Q12527 1178 aa3.67□□□□□ -1.82
CDC55YGL190C ERG6P25087 383 aaKnown RBP3.66□□□□□ -1.82
CDC55YGL190C TOM20P35180 183 aa3.66□□□□□ -1.82
CDC55YGL190C YHR112CP38716 378 aa3.66□□□□□ -1.82
CDC55YGL190C FMP52P40008 231 aa3.66□□□□□ -1.82
CDC55YGL190C CAF16P43569 289 aa3.66□□□□□ -1.82
CDC55YGL190C STU2P46675 888 aa3.66□□□□□ -1.82
CDC55YGL190C BNA2P47125 453 aa3.66□□□□□ -1.82
CDC55YGL190C SIR3P06701 978 aa3.65□□□□□ -1.82
CDC55YGL190C VBA3P25594 458 aa3.65□□□□□ -1.82
CDC55YGL190C YKR051WP36142 418 aa3.65□□□□□ -1.82
CDC55YGL190C PRP31P49704 494 aaPredicted RBP3.65□□□□□ -1.82
CDC55YGL190C TEL2P53038 688 aa3.65□□□□□ -1.82
CDC55YGL190C MTL1P53214 551 aa3.65□□□□□ -1.82
CDC55YGL190C RIA1P53893 1110 aa3.65□□□□□ -1.82
CDC55YGL190C SGO1Q08490 590 aa3.65□□□□□ -1.82
CDC55YGL190C HRP1Q99383 534 aaKnown RBP3.65□□□□□ -1.82
CDC55YGL190C MET6P05694 767 aaKnown RBP3.64□□□□□ -1.83
CDC55YGL190C HIS7P33734 552 aaKnown RBP3.64□□□□□ -1.83
CDC55YGL190C STO1P34160 861 aaKnown RBP3.64□□□□□ -1.83
CDC55YGL190C MIP6P38760 659 aaKnown RBP3.64□□□□□ -1.83
CDC55YGL190C FMO1P38866 432 aa3.64□□□□□ -1.83
CDC55YGL190C HRB1P38922 454 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
CDC55YGL190C ARP4P80428 489 aa3.64□□□□□ -1.83
CDC55YGL190C SNP1Q00916 300 aaPredicted RBP3.64□□□□□ -1.83
CDC55YGL190C ARG5,6Q01217 863 aa3.64□□□□□ -1.83
CDC55YGL190C GAD1Q04792 585 aa3.64□□□□□ -1.83
CDC55YGL190C PHO8P11491 566 aa3.63□□□□□ -1.83
CDC55YGL190C MSH2P25847 964 aa3.63□□□□□ -1.83
CDC55YGL190C APL2P36000 726 aaPredicted RBP3.63□□□□□ -1.83
CDC55YGL190C UBS1P38290 277 aa3.63□□□□□ -1.83
CDC55YGL190C MNN1P39106 762 aa3.63□□□□□ -1.83
CDC55YGL190C ATF1P40353 525 aa3.63□□□□□ -1.83
CDC55YGL190C LEE1Q02799 301 aaKnown RBP3.63□□□□□ -1.83
CDC55YGL190C HMO1Q03973 246 aaKnown RBP3.63□□□□□ -1.83
CDC55YGL190C YGR161W-CQ3E744 92 aa3.63□□□□□ -1.83
CDC55YGL190C SRD1P09007 221 aa3.63□□□□□ -1.83
CDC55YGL190C TDP1P38319 544 aa3.63□□□□□ -1.83
CDC55YGL190C CCT3P39077 534 aaKnown RBP3.63□□□□□ -1.83
CDC55YGL190C DSS1P39112 969 aa3.63□□□□□ -1.83
CDC55YGL190C GET2P40056 285 aa3.63□□□□□ -1.83
CDC55YGL190C CCT7P42943 550 aaKnown RBP3.63□□□□□ -1.83
CDC55YGL190C PAN2P53010 1115 aaPredicted RBP3.63□□□□□ -1.83
CDC55YGL190C SMX3P54999 86 aaPredicted RBP3.63□□□□□ -1.83
CDC55YGL190C YML122CQ03207 126 aa3.63□□□□□ -1.83
CDC55YGL190C YLR125WQ12138 136 aa3.63□□□□□ -1.83
CDC55YGL190C SSB1P11484 613 aaKnown RBP3.62□□□□□ -1.83
CDC55YGL190C HOG1P32485 435 aa3.62□□□□□ -1.83
CDC55YGL190C SSB2P40150 613 aaKnown RBP3.62□□□□□ -1.83
CDC55YGL190C GID8P40208 455 aa3.62□□□□□ -1.83
CDC55YGL190C VPS73P53142 486 aaKnown RBP3.62□□□□□ -1.83
CDC55YGL190C NPY1P53164 384 aa3.62□□□□□ -1.83
CDC55YGL190C BNR1P40450 1375 aa3.62□□□□□ -1.83
CDC55YGL190C SFB3P38810 929 aa3.61□□□□□ -1.83
CDC55YGL190C YFL052WP43551 465 aa3.61□□□□□ -1.83
CDC55YGL190C TAH11P47112 604 aa3.61□□□□□ -1.83
CDC55YGL190C YJR142WP47173 342 aa3.61□□□□□ -1.83
CDC55YGL190C UBC9P50623 157 aaPredicted RBP3.61□□□□□ -1.83
CDC55YGL190C YBP2P53169 641 aa3.61□□□□□ -1.83
CDC55YGL190C MCM21Q06675 368 aa3.61□□□□□ -1.83
CDC55YGL190C PYC1P11154 1178 aaKnown RBP3.6□□□□□ -1.83
CDC55YGL190C GRX4P32642 244 aa3.6□□□□□ -1.83
CDC55YGL190C YKR018CP36114 725 aa3.6□□□□□ -1.83
CDC55YGL190C RPN10P38886 268 aaKnown RBP3.6□□□□□ -1.83
CDC55YGL190C NUP60P39705 539 aa3.6□□□□□ -1.83
CDC55YGL190C PCL10P53124 433 aa3.6□□□□□ -1.83
CDC55YGL190C FHN1P53279 174 aa3.6□□□□□ -1.83
CDC55YGL190C SSL2Q00578 843 aa3.6□□□□□ -1.83
CDC55YGL190C NHX1Q04121 633 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms