RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	HES1	P35843	434 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	KDX1	P36005	433 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	CRG1	P38892	291 aa	RIP-Chip data	5.71	□□□□□ -1.5	not detected
VTC2	YFL004W	YMR147W	P40218	223 aa	Known RBP	5.71	□□□□□ -1.5
VTC2	YFL004W	RIC1	P40395	1056 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	LAM5	P43560	674 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	YFL034W	P43564	1073 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	TAD1	P53065	400 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	DRN1	P53255	507 aa	Known RBP	5.71	□□□□□ -1.5
VTC2	YFL004W	OSH6	Q02201	448 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	ACL4	Q03771	387 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	SPO75	Q07798	868 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	RIX7	Q07844	837 aa	Known RBP	5.71	□□□□□ -1.5
VTC2	YFL004W	YIG1	Q08956	461 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	YPT6	Q99260	215 aa		5.71	□□□□□ -1.5
VTC2	YFL004W	SSC1	P0CS90	654 aa	Known RBP	5.7	□□□□□ -1.5
VTC2	YFL004W	TIF1	P10081	395 aa	Known RBP	5.7	□□□□□ -1.5
VTC2	YFL004W	RGR1	P19263	1082 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	GSY1	P23337	708 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	YCR016W	P25617	290 aa	Known RBP	5.7	□□□□□ -1.5
VTC2	YFL004W	PLC1	P32383	869 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	COY1	P34237	679 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	PIK1	P39104	1066 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	MET18	P40469	1032 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	MKT1	P40850	830 aa	Known RBP	5.7	□□□□□ -1.5
VTC2	YFL004W	LYS14	P40971	790 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	ATG36	P46983	293 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	JJJ2	P46997	583 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	YJR054W	P47114	497 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	RIM8	P53179	542 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	YGR016W	P53209	190 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	MMT1	Q03218	510 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	DML1	Q03652	475 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	FUS2	Q05670	677 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	COA4	Q05809	96 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	RSA1	Q08932	381 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	TYW1	Q08960	810 aa	Known RBP	5.7	□□□□□ -1.5
VTC2	YFL004W	RKM1	Q08961	583 aa	Predicted RBP	5.7	□□□□□ -1.5
VTC2	YFL004W	YLR125W	Q12138	136 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	NBL1	Q3E7Y6	73 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	CMD1	P06787	147 aa	Known RBP	5.7	□□□□□ -1.5
VTC2	YFL004W	TEC1	P18412	486 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	MSH2	P25847	964 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	HIR2	P32480	875 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	FRD1	P32614	470 aa	Known RBP	5.7	□□□□□ -1.5
VTC2	YFL004W	GYP6	P32806	458 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	RER2	P35196	286 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	MET1	P36150	593 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	STN1	P38960	494 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	MSN5	P52918	1224 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	RGA2	Q06407	1009 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	ALE1	Q08548	619 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	AIM41	Q12032	185 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	TIP41	Q12199	356 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	APC2	Q12440	853 aa		5.7	□□□□□ -1.5
VTC2	YFL004W	TPO5	P36029	618 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	DCW1	P36091	449 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	PPS1	P38148	807 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	UBP13	P38187	747 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	ERG7	P38604	731 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	RCK2	P38623	610 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	TAF6	P53040	516 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	MRM2	P53123	320 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	USE1	P53146	245 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	DCP2	P53550	970 aa	Known RBP	5.69	□□□□□ -1.5
VTC2	YFL004W	TOF1	P53840	1238 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	MDM1	Q01846	1127 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	SRL4	Q03085	281 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	FMP42	Q04991	504 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	MCP2	Q06567	569 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	FAP7	Q12055	197 aa	Predicted RBP	5.69	□□□□□ -1.5
VTC2	YFL004W	YBL113C	Q7M4S9	792 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	POL30	P15873	258 aa	Known RBP	5.69	□□□□□ -1.5
VTC2	YFL004W	AFG2	P32794	780 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	YKL222C	P35995	705 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	ECM2	P38241	364 aa	Known RBP	5.69	□□□□□ -1.5
VTC2	YFL004W	ATP22	P50273	684 aa	Predicted RBP	5.69	□□□□□ -1.5
VTC2	YFL004W	HEH2	Q03281	663 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	SEC10	Q06245	871 aa		5.69	□□□□□ -1.5
VTC2	YFL004W	HSP30	P25619	332 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	YJU2	P28320	278 aa	Predicted RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	SMY2	P32909	740 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	HCS1	P34243	683 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	AST2	P39945	430 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	DAK2	P43550	591 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	SWP82	P43554	623 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	VMA10	P48836	114 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	ATG1	P53104	897 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	YMR187C	Q03236	431 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	SYF1	Q04048	859 aa	Predicted RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	TDA5	Q06417	326 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	SMC5	Q08204	1093 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	CDC53	Q12018	815 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	DBP10	Q12389	995 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	RAD61	Q99359	647 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	AI4	P03878	556 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	HTA1	P04911	132 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	HTA2	P04912	132 aa		5.68	□□□□□ -1.5
VTC2	YFL004W	ILV2	P07342	687 aa	Known RBP	5.68	□□□□□ -1.5
VTC2	YFL004W	NUC1	P08466	329 aa		5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 39.9 ms