RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W LAS1P36146 502 aaPredicted RBP3.95□□□□□ -1.78
CHD1YER164W PHO88P38264 188 aaPredicted RBP3.95□□□□□ -1.78
CHD1YER164W SPC97P38863 823 aa3.95□□□□□ -1.78
CHD1YER164W UTP9P38882 575 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W PCF11P39081 626 aaPredicted RBP3.95□□□□□ -1.78
CHD1YER164W GPD2P41911 440 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W NBP1P52919 319 aaPredicted RBP3.95□□□□□ -1.78
CHD1YER164W CNM67P53865 581 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W URH1Q04179 340 aa3.95□□□□□ -1.78
CHD1YER164W VTI1Q04338 217 aa3.95□□□□□ -1.78
CHD1YER164W KRE28Q04431 385 aa3.95□□□□□ -1.78
CHD1YER164W VIP1Q06685 1146 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W MSH5Q12175 901 aa3.95□□□□□ -1.78
CHD1YER164W RPL24AP04449 155 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W KAR9P32526 644 aa3.95□□□□□ -1.78
CHD1YER164W DOM34P33309 386 aa3.95□□□□□ -1.78
CHD1YER164W BFR1P38934 470 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78 RIP-Chip
CHD1YER164W CCT3P39077 534 aaKnown RBP3.95□□□□□ -1.78
CHD1YER164W PES4P39684 611 aa3.95□□□□□ -1.78
CHD1YER164W YFL034WP43564 1073 aa3.95□□□□□ -1.78
CHD1YER164W SAD1P43589 448 aa3.95□□□□□ -1.78
CHD1YER164W YJL007CP47080 104 aa3.95□□□□□ -1.78
CHD1YER164W YJR142WP47173 342 aa3.95□□□□□ -1.78
CHD1YER164W YGR117CP53270 476 aa3.95□□□□□ -1.78
CHD1YER164W ARK1P53974 638 aa3.95□□□□□ -1.78
CHD1YER164W TFB2Q02939 513 aa3.95□□□□□ -1.78
CHD1YER164W VPS34P22543 875 aa3.94□□□□□ -1.78
CHD1YER164W RAD57P25301 460 aa3.94□□□□□ -1.78
CHD1YER164W SEC20P28791 383 aa3.94□□□□□ -1.78
CHD1YER164W BLI1P35727 113 aa3.94□□□□□ -1.78
CHD1YER164W VFA1P40080 203 aa3.94□□□□□ -1.78
CHD1YER164W BOP3P53958 396 aa3.94□□□□□ -1.78
CHD1YER164W ERG5P54781 538 aa3.94□□□□□ -1.78
CHD1YER164W DIG1Q03063 452 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W WHI4Q07655 649 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W YOR389WQ08912 624 aa3.94□□□□□ -1.78
CHD1YER164W TUS1Q06412 1307 aa3.94□□□□□ -1.78
CHD1YER164W SSA4P22202 642 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W KIN3P22209 435 aa3.94□□□□□ -1.78
CHD1YER164W ILV6P25605 309 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W AAD3P25612 363 aa3.94□□□□□ -1.78
CHD1YER164W NAM7P30771 971 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W MRF1P30775 413 aaPredicted RBP3.94□□□□□ -1.78
CHD1YER164W YBL055CP34220 418 aaPredicted RBP3.94□□□□□ -1.78
CHD1YER164W PAN5P38787 379 aa3.94□□□□□ -1.78
CHD1YER164W APE4P38821 490 aa3.94□□□□□ -1.78
CHD1YER164W FRT2P39734 528 aa3.94□□□□□ -1.78
CHD1YER164W ACA1P39970 489 aa3.94□□□□□ -1.78
CHD1YER164W RGD2P43556 714 aa3.94□□□□□ -1.78
CHD1YER164W UBP11P36026 717 aa3.94□□□□□ -1.78
CHD1YER164W MRX1P40050 688 aa3.94□□□□□ -1.78
CHD1YER164W NIT1P40447 199 aa3.94□□□□□ -1.78
CHD1YER164W NMD5P46970 1048 aa3.94□□□□□ -1.78
CHD1YER164W AVT1P47082 602 aa3.94□□□□□ -1.78
CHD1YER164W TPO2P53283 614 aa3.94□□□□□ -1.78
CHD1YER164W TIM11P81449 96 aaPredicted RBP3.94□□□□□ -1.78
CHD1YER164W DUS3Q06053 668 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W HMI1Q12039 706 aa3.94□□□□□ -1.78
CHD1YER164W CMD1P06787 147 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W PAT1P25644 796 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W KES1P35844 434 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W EMW1P42842 904 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W SUM1P46676 1062 aa3.94□□□□□ -1.78
CHD1YER164W TFB3Q03290 321 aa3.94□□□□□ -1.78
CHD1YER164W YML037CQ03703 340 aa3.94□□□□□ -1.78
CHD1YER164W DON1Q05610 365 aa3.94□□□□□ -1.78
CHD1YER164W RRP9Q06506 573 aaKnown RBP3.94□□□□□ -1.78
CHD1YER164W DBP5P20449 482 aaKnown RBP3.93□□□□□ -1.78
CHD1YER164W PHO87P25360 923 aa3.93□□□□□ -1.78
CHD1YER164W YME1P32795 747 aa3.93□□□□□ -1.78
CHD1YER164W MMM1P41800 426 aa3.93□□□□□ -1.78
CHD1YER164W MDR1P53258 950 aa3.93□□□□□ -1.78
CHD1YER164W KTR5P53966 522 aaPredicted RBP3.93□□□□□ -1.78
CHD1YER164W VTC3Q02725 835 aa3.93□□□□□ -1.78
CHD1YER164W ATP25Q03153 612 aa3.93□□□□□ -1.78
CHD1YER164W YML119WQ03208 357 aa3.93□□□□□ -1.78
CHD1YER164W PLP1Q04004 230 aa3.93□□□□□ -1.78
CHD1YER164W AIM41Q12032 185 aa3.93□□□□□ -1.78
CHD1YER164W MED2Q12124 431 aa3.93□□□□□ -1.78
CHD1YER164W SPO11P23179 398 aa3.93□□□□□ -1.78
CHD1YER164W TFC4P33339 1025 aa3.93□□□□□ -1.78
CHD1YER164W CCC2P38995 1004 aa3.93□□□□□ -1.78
CHD1YER164W NUP60P39705 539 aa3.93□□□□□ -1.78
CHD1YER164W EFM4P40516 257 aa3.93□□□□□ -1.78
CHD1YER164W CGR1P53188 120 aa3.93□□□□□ -1.78
CHD1YER164W LSB1P53281 241 aa3.93□□□□□ -1.78
CHD1YER164W ULP1Q02724 621 aa3.93□□□□□ -1.78
CHD1YER164W YPL109CQ02981 657 aa3.93□□□□□ -1.78
CHD1YER164W BUL2Q03758 920 aaKnown RBP3.93□□□□□ -1.78
CHD1YER164W POB3Q04636 552 aaKnown RBP3.93□□□□□ -1.78
CHD1YER164W YLR326WQ06170 240 aaKnown RBP3.93□□□□□ -1.78
CHD1YER164W SIL1Q08199 421 aa3.93□□□□□ -1.78
CHD1YER164W OCA6Q12454 224 aa3.93□□□□□ -1.78
CHD1YER164W ATG11Q12527 1178 aa3.93□□□□□ -1.78
CHD1YER164W RPL17AP05740 184 aaKnown RBP3.93□□□□□ -1.78
CHD1YER164W SBP1P10080 294 aaKnown RBP3.93□□□□□ -1.78
CHD1YER164W RAD18P10862 487 aa3.93□□□□□ -1.78
CHD1YER164W PEP7P32609 515 aa3.93□□□□□ -1.78
CHD1YER164W BCD1P38772 366 aa3.93□□□□□ -1.78
CHD1YER164W SET5P38890 526 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms