RNA–Protein interactions for RNA: YER109C

FLO8, Transcript of Transcription factor, yeast

Gene FLO8, Length 2,400 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FLO8	YER109C	MKT1	P40850	830 aa	Known RBP	4.55	□□□□□ -1.68
FLO8	YER109C	BRO1	P48582	844 aa		4.55	□□□□□ -1.68
FLO8	YER109C	GPD1	Q00055	391 aa	Known RBP	4.55	□□□□□ -1.68
FLO8	YER109C	RPA49	Q01080	415 aa	Predicted RBP	4.55	□□□□□ -1.68
FLO8	YER109C	CUS1	Q02554	436 aa	Predicted RBP	4.55	□□□□□ -1.68
FLO8	YER109C	YPL034W	Q03083	165 aa		4.55	□□□□□ -1.68
FLO8	YER109C	STE20	Q03497	939 aa	Known RBP	4.55	□□□□□ -1.68
FLO8	YER109C	YMR114C	Q04471	368 aa	Known RBP	4.55	□□□□□ -1.68
FLO8	YER109C	RLP24	Q07915	199 aa	Known RBP	4.55	□□□□□ -1.68
FLO8	YER109C	HFI1	Q12060	488 aa		4.55	□□□□□ -1.68
FLO8	YER109C	EMP46	Q12396	444 aa		4.55	□□□□□ -1.68
FLO8	YER109C	ECM3	Q99252	613 aa		4.55	□□□□□ -1.68
FLO8	YER109C	GAL10	P04397	699 aa		4.54	□□□□□ -1.68
FLO8	YER109C	GFA1	P14742	717 aa	Known RBP	4.54	□□□□□ -1.68
FLO8	YER109C	RNR1	P21524	888 aa	Known RBP	4.54	□□□□□ -1.68
FLO8	YER109C	RME1	P32338	300 aa	Known RBP	4.54	□□□□□ -1.68
FLO8	YER109C	DPH2	P32461	534 aa		4.54	□□□□□ -1.68
FLO8	YER109C	CSG2	P35206	410 aa		4.54	□□□□□ -1.68
FLO8	YER109C	REI1	P38344	393 aa	Predicted RBP	4.54	□□□□□ -1.68
FLO8	YER109C	YER186C	P40101	306 aa		4.54	□□□□□ -1.68
FLO8	YER109C	ALT1	P52893	592 aa		4.54	□□□□□ -1.68
FLO8	YER109C	ELP3	Q02908	557 aa	Known RBP	4.54	□□□□□ -1.68
FLO8	YER109C	RRB1	Q04225	511 aa	Known RBP	4.54	□□□□□ -1.68
FLO8	YER109C	ESC2	Q06340	456 aa		4.54	□□□□□ -1.68
FLO8	YER109C	ECM30	Q06673	1274 aa		4.54	□□□□□ -1.68
FLO8	YER109C	MCM16	Q12262	181 aa		4.54	□□□□□ -1.68
FLO8	YER109C	PCD1	Q12524	340 aa		4.54	□□□□□ -1.68
FLO8	YER109C	CTF3	Q12748	733 aa		4.54	□□□□□ -1.68
FLO8	YER109C	CHS1	P08004	1131 aa		4.54	□□□□□ -1.68
FLO8	YER109C	FUB1	P25659	250 aa		4.54	□□□□□ -1.68
FLO8	YER109C	ADK2	P26364	225 aa		4.54	□□□□□ -1.68
FLO8	YER109C	TIM23	P32897	222 aa		4.54	□□□□□ -1.68
FLO8	YER109C	SMF1	P38925	575 aa		4.54	□□□□□ -1.68
FLO8	YER109C	FIR1	P40020	876 aa		4.54	□□□□□ -1.68
FLO8	YER109C	KAP123	P40069	1113 aa	Known RBP	4.54	□□□□□ -1.68
FLO8	YER109C	JJJ3	P47138	172 aa		4.54	□□□□□ -1.68
FLO8	YER109C	VPS70	P47161	811 aa		4.54	□□□□□ -1.68
FLO8	YER109C	COS5	P47187	383 aa		4.54	□□□□□ -1.68
FLO8	YER109C	PPM1	Q04081	328 aa		4.54	□□□□□ -1.68
FLO8	YER109C	EMI2	Q04409	500 aa	Known RBP	4.54	□□□□□ -1.68
FLO8	YER109C	ECM7	Q06200	448 aa		4.54	□□□□□ -1.68
FLO8	YER109C	YPR027C	Q12079	277 aa		4.54	□□□□□ -1.68
FLO8	YER109C	MOT1	P32333	1867 aa		4.54	□□□□□ -1.68
FLO8	YER109C	AFT1	P22149	690 aa		4.53	□□□□□ -1.68
FLO8	YER109C	TRM2	P33753	639 aa		4.53	□□□□□ -1.68
FLO8	YER109C	QNS1	P38795	714 aa	Known RBP	4.53	□□□□□ -1.68
FLO8	YER109C	SAP1	P39955	897 aa	Known RBP	4.53	□□□□□ -1.68
FLO8	YER109C	FTR1	P40088	404 aa		4.53	□□□□□ -1.68
FLO8	YER109C	EFM4	P40516	257 aa		4.53	□□□□□ -1.68
FLO8	YER109C	PRP31	P49704	494 aa	Predicted RBP	4.53	□□□□□ -1.68
FLO8	YER109C	MUB1	Q03162	620 aa		4.53	□□□□□ -1.68
FLO8	YER109C	PLP2	Q12017	286 aa		4.53	□□□□□ -1.68
FLO8	YER109C	PKH2	Q12236	1081 aa	Known RBP	4.53	□□□□□ -1.68
FLO8	YER109C	ADE2	P21264	571 aa	Known RBP	4.53	□□□□□ -1.68
FLO8	YER109C	LRE1	P25579	583 aa	Known RBP	4.53	□□□□□ -1.68
FLO8	YER109C	GPI10	P30777	616 aa		4.53	□□□□□ -1.68
FLO8	YER109C	FAF1	P40546	346 aa	Predicted RBP	4.53	□□□□□ -1.68
FLO8	YER109C	FIG4	P42837	879 aa		4.53	□□□□□ -1.68
FLO8	YER109C	SHE10	P53075	577 aa		4.53	□□□□□ -1.68
FLO8	YER109C	BOP3	P53958	396 aa		4.53	□□□□□ -1.68
FLO8	YER109C	SPP1	Q03012	353 aa		4.53	□□□□□ -1.68
FLO8	YER109C	RCR2	Q03446	210 aa	Known RBP	4.53	□□□□□ -1.68
FLO8	YER109C	TSR1	Q07381	788 aa	Known RBP	4.53	□□□□□ -1.68
FLO8	YER109C	SIF2	P38262	535 aa		4.52	□□□□□ -1.69
FLO8	YER109C	RIM4	P38741	713 aa		4.52	□□□□□ -1.69
FLO8	YER109C	CCC2	P38995	1004 aa		4.52	□□□□□ -1.69
FLO8	YER109C	SAH1	P39954	449 aa	Known RBP	4.52	□□□□□ -1.69
FLO8	YER109C	AVT2	P39981	480 aa		4.52	□□□□□ -1.69
FLO8	YER109C	SMC3	P47037	1230 aa		4.52	□□□□□ -1.69
FLO8	YER109C	OPY2	Q06810	360 aa		4.52	□□□□□ -1.69
FLO8	YER109C	ESC8	Q08119	714 aa		4.52	□□□□□ -1.69
FLO8	YER109C	AI5_BETA	Q9ZZX0	354 aa		4.52	□□□□□ -1.69
FLO8	YER109C	NAT1	P12945	854 aa	Known RBP	4.52	□□□□□ -1.69
FLO8	YER109C	VBA3	P25594	458 aa		4.52	□□□□□ -1.69
FLO8	YER109C	RPT1	P33299	467 aa	Known RBP	4.52	□□□□□ -1.69
FLO8	YER109C	VBA5	P36172	582 aa		4.52	□□□□□ -1.69
FLO8	YER109C	TCD1	P38756	429 aa		4.52	□□□□□ -1.69
FLO8	YER109C	DYS1	P38791	387 aa		4.52	□□□□□ -1.69
FLO8	YER109C	NDC80	P40460	691 aa		4.52	□□□□□ -1.69
FLO8	YER109C	YIR016W	P40572	265 aa		4.52	□□□□□ -1.69
FLO8	YER109C	FOL2	P51601	243 aa	Known RBP	4.52	□□□□□ -1.69
FLO8	YER109C	SPC98	P53540	846 aa		4.52	□□□□□ -1.69
FLO8	YER109C	BET4	Q00618	327 aa		4.52	□□□□□ -1.69
FLO8	YER109C	VAC14	Q06708	880 aa		4.52	□□□□□ -1.69
FLO8	YER109C	PUS1	Q12211	544 aa	Known RBP	4.52	□□□□□ -1.69
FLO8	YER109C	PEX1	P24004	1043 aa		4.51	□□□□□ -1.69
FLO8	YER109C	CCL1	P37366	393 aa		4.51	□□□□□ -1.69
FLO8	YER109C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.51	□□□□□ -1.69	not detected
FLO8	YER109C	MCX1	P38323	520 aa	Predicted RBP	4.51	□□□□□ -1.69
FLO8	YER109C	RRT2	P38332	387 aa		4.51	□□□□□ -1.69
FLO8	YER109C	HIS2	P38635	335 aa		4.51	□□□□□ -1.69
FLO8	YER109C	SSP1	P38871	571 aa		4.51	□□□□□ -1.69
FLO8	YER109C	ESL1	P40456	1118 aa		4.51	□□□□□ -1.69
FLO8	YER109C	STU2	P46675	888 aa		4.51	□□□□□ -1.69
FLO8	YER109C	DAS1	P47005	663 aa		4.51	□□□□□ -1.69
FLO8	YER109C	ALY2	P47029	1046 aa		4.51	□□□□□ -1.69
FLO8	YER109C	YGL036W	P53185	909 aa	Predicted RBP	4.51	□□□□□ -1.69
FLO8	YER109C	NOG2	P53742	486 aa	Known RBP	4.51	□□□□□ -1.69
FLO8	YER109C	JJJ1	P53863	590 aa		4.51	□□□□□ -1.69
FLO8	YER109C	ESBP6	P53918	673 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms