RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	REI1	P38344	393 aa	Predicted RBP	4.88	□□□□□ -1.63
TFB3	YDR460W	SMC2	P38989	1170 aa	Known RBP	4.88	□□□□□ -1.63
TFB3	YDR460W	HXT6	P39003	570 aa	Known RBP	4.88	□□□□□ -1.63
TFB3	YDR460W	HXT7	P39004	570 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	KAP123	P40069	1113 aa	Known RBP	4.88	□□□□□ -1.63
TFB3	YDR460W	AIM21	P40563	679 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	MAD1	P40957	749 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	SBE2	P42223	864 aa	Known RBP	4.88	□□□□□ -1.63
TFB3	YDR460W	MET12	P46151	657 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	PRP43	P53131	767 aa	Known RBP	4.88	□□□□□ -1.63
TFB3	YDR460W	SRL4	Q03085	281 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	VPS16	Q03308	798 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	PKH1	Q03407	766 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	MTC5	Q03897	1148 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	NKP2	Q06162	153 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	RRP9	Q06506	573 aa	Known RBP	4.88	□□□□□ -1.63
TFB3	YDR460W	ATG23	Q06671	453 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	PSK2	Q08217	1101 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	TAF10	Q12030	206 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	PIN2	Q12057	282 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	NUR1	Q12066	484 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	BUG1	Q12191	341 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	RIO1	Q12196	484 aa	Known RBP	4.88	□□□□□ -1.63
TFB3	YDR460W	POM152	P39685	1337 aa		4.88	□□□□□ -1.63
TFB3	YDR460W	RIM15	P43565	1770 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	YPR089W	O13585	888 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	VAS1	P07806	1104 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-DR6	P0CX70	440 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-ER1	P0CX71	440 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-LR2	P0CX72	440 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-PL	P0CX73	440 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-JR1	P0CX74	440 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-LR3	P0CX75	440 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-ML2	P0CX76	440 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	SEC23	P15303	768 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	KCC4	P25389	1037 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	RPC19	P28000	142 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	NIP100	P33420	868 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	SEC66	P33754	206 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	MAC1	P35192	417 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	ERT1	P38140	529 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	OSH3	P38713	996 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	PIH1	P38768	344 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	GGA2	P38817	585 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	BOI2	P39969	1040 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	HUL4	P40985	892 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	POL31	P46957	487 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	TY4A-J	P47023	414 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	GYP7	P48365	746 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	ARI1	P53111	347 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	RTS3	P53289	263 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	YNR014W	P53719	212 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	GTR1	Q00582	310 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	YKR005C	Q02203	525 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	SWP1	Q02795	286 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	YKU80	Q04437	629 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	MAG2	Q06436	670 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	VAM6	Q07468	1049 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	PCL8	Q08966	492 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-GR1	Q12085	440 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	ATP16	Q12165	160 aa		4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	TY1A-OL	Q92392	440 aa	Known RBP	4.87	□□□□□ -1.63
TFB3	YDR460W	JIP3	O13555	125 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	GCR1	P07261	785 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	YML002W	P0CF17	737 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	UBC1	P21734	215 aa	Known RBP	4.86	□□□□□ -1.63
TFB3	YDR460W	HSP30	P25619	332 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	NIP1	P32497	812 aa	Known RBP	4.86	□□□□□ -1.63
TFB3	YDR460W	CBF2	P32504	956 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	SMI1	P32566	505 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	CPR5	P35176	225 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	YKL222C	P35995	705 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	SAK1	P38990	1142 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	YJR079W	P47126	109 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	GCV1	P48015	400 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	MEC3	Q02574	474 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	NOP6	Q07623	225 aa	Known RBP	4.86	□□□□□ -1.63
TFB3	YDR460W	RSA1	Q08932	381 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	ELG1	Q12050	791 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	HSP42	Q12329	375 aa		4.86	□□□□□ -1.63
TFB3	YDR460W	HEM13	P11353	328 aa	Known RBP	4.85	□□□□□ -1.63
TFB3	YDR460W	CDC34	P14682	295 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	RPB4	P20433	221 aa	Predicted RBP	4.85	□□□□□ -1.63
TFB3	YDR460W	SPE2	P21182	396 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	MSB1	P21339	1137 aa	Known RBP	4.85	□□□□□ -1.63
TFB3	YDR460W	VMA4	P22203	233 aa	Known RBP	4.85	□□□□□ -1.63
TFB3	YDR460W	PRD1	P25375	712 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	NPL6	P32832	435 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	SEC6	P32844	805 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	PEX5	P35056	612 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	YKL063C	P35725	167 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	MAE1	P36013	669 aa	Known RBP	4.85	□□□□□ -1.63
TFB3	YDR460W	YKR015C	P36111	568 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	RDH54	P38086	958 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	NEM1	P38757	446 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	TDA11	P38854	504 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	SWD1	P39706	426 aa		4.85	□□□□□ -1.63
TFB3	YDR460W	MRX1	P40050	688 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms