RNA–Protein interactions for RNA: YDR235W

PRP42, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP42, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP42YDR235W BUL2Q03758 920 aaKnown RBP1.88□□□□□ -2.11
PRP42YDR235W HFD1Q04458 532 aa1.88□□□□□ -2.11
PRP42YDR235W YMC1P32331 307 aa1.87□□□□□ -2.11
PRP42YDR235W DED81P38707 554 aaKnown RBP1.87□□□□□ -2.11
PRP42YDR235W FMO1P38866 432 aa1.87□□□□□ -2.11
PRP42YDR235W FAA4P47912 694 aaKnown RBP1.87□□□□□ -2.11
PRP42YDR235W MTL1P53214 551 aa1.87□□□□□ -2.11
PRP42YDR235W CTK1Q03957 528 aaKnown RBP1.87□□□□□ -2.11
PRP42YDR235W PRC1P00729 532 aa1.86□□□□□ -2.11
PRP42YDR235W GCS1P35197 352 aa1.86□□□□□ -2.11
PRP42YDR235W NUP60P39705 539 aa1.86□□□□□ -2.11
PRP42YDR235W NOG2P53742 486 aaKnown RBP1.86□□□□□ -2.11
PRP42YDR235W RRP15Q06511 250 aaPredicted RBP1.86□□□□□ -2.11
PRP42YDR235W FAL1Q12099 399 aaKnown RBP1.86□□□□□ -2.11
PRP42YDR235W USV1Q12132 391 aa1.86□□□□□ -2.11
PRP42YDR235W HOT13P36078 116 aa1.85□□□□□ -2.11
PRP42YDR235W PXL1P36166 706 aa1.85□□□□□ -2.11
PRP42YDR235W PMC1P38929 1173 aaPredicted RBP1.85□□□□□ -2.11
PRP42YDR235W SPC98P53540 846 aa1.85□□□□□ -2.11
PRP42YDR235W GDE1Q02979 1223 aa1.85□□□□□ -2.11
PRP42YDR235W SHE9Q04172 456 aa1.85□□□□□ -2.11
PRP42YDR235W GPR1Q12361 961 aa1.85□□□□□ -2.11
PRP42YDR235W TOP3P13099 656 aa1.84□□□□□ -2.11
PRP42YDR235W THR1P17423 357 aaKnown RBP1.84□□□□□ -2.11
PRP42YDR235W EUG1P32474 517 aa1.84□□□□□ -2.11
PRP42YDR235W ECM32P32644 1121 aaKnown RBP1.84□□□□□ -2.11
PRP42YDR235W YMC2P38087 329 aa1.84□□□□□ -2.11
PRP42YDR235W LYS9P38999 446 aa1.84□□□□□ -2.11
PRP42YDR235W ECM1P39715 212 aa1.84□□□□□ -2.11
PRP42YDR235W MTR3P48240 250 aaPredicted RBP1.84□□□□□ -2.11
PRP42YDR235W ORM2Q06144 216 aa1.84□□□□□ -2.11
PRP42YDR235W ULA1Q12059 462 aa1.84□□□□□ -2.11
PRP42YDR235W DAL7P21826 554 aa1.84□□□□□ -2.12
PRP42YDR235W LSC1P53598 329 aaKnown RBP1.84□□□□□ -2.12
PRP42YDR235W ZRT2Q12436 422 aa1.84□□□□□ -2.12
PRP42YDR235W SET3P36124 751 aa1.83□□□□□ -2.12
PRP42YDR235W ASN1P49089 572 aaKnown RBP1.83□□□□□ -2.12
PRP42YDR235W SCW4P53334 386 aaKnown RBP1.83□□□□□ -2.12
PRP42YDR235W PHO5P00635 467 aa1.82□□□□□ -2.12
PRP42YDR235W SAP190P36123 1033 aa1.82□□□□□ -2.12
PRP42YDR235W THI21Q08975 551 aa1.82□□□□□ -2.12
PRP42YDR235W ENV7Q12003 364 aa1.82□□□□□ -2.12
PRP42YDR235W YPR071WQ12346 211 aa1.82□□□□□ -2.12
PRP42YDR235W MIT1P40002 666 aa1.81□□□□□ -2.12
PRP42YDR235W YBP2P53169 641 aa1.81□□□□□ -2.12
PRP42YDR235W SCW10Q04951 389 aa1.81□□□□□ -2.12
PRP42YDR235W RGC1Q06108 1083 aaKnown RBP1.81□□□□□ -2.12
PRP42YDR235W CLF1Q12309 687 aaPredicted RBP1.81□□□□□ -2.12
PRP42YDR235W AI5_ALPHAQ9ZZX1 630 aa1.81□□□□□ -2.12
PRP42YDR235W YCL002CP25565 263 aa1.8□□□□□ -2.12
PRP42YDR235W HBS1P32769 611 aaKnown RBP1.8□□□□□ -2.12
PRP42YDR235W PBY1P38254 753 aa1.8□□□□□ -2.12
PRP42YDR235W YHR112CP38716 378 aa1.8□□□□□ -2.12
PRP42YDR235W PRP31P49704 494 aaPredicted RBP1.8□□□□□ -2.12
PRP42YDR235W NIT3P49954 291 aa1.8□□□□□ -2.12
PRP42YDR235W TAD1P53065 400 aa1.8□□□□□ -2.12
PRP42YDR235W OYE2Q03558 400 aaKnown RBP1.8□□□□□ -2.12
PRP42YDR235W LRS4Q04087 347 aaKnown RBP1.8□□□□□ -2.12
PRP42YDR235W YOR111WQ99210 232 aa1.8□□□□□ -2.12
PRP42YDR235W BEM3P32873 1128 aa1.8□□□□□ -2.12
PRP42YDR235W MRP8P35719 219 aa1.8□□□□□ -2.12
PRP42YDR235W TRZ1P36159 838 aaPredicted RBP1.8□□□□□ -2.12
PRP42YDR235W SPC97P38863 823 aa1.8□□□□□ -2.12
PRP42YDR235W YAT2P40017 923 aa1.8□□□□□ -2.12
PRP42YDR235W YGR151CP53287 111 aa1.8□□□□□ -2.12
PRP42YDR235W IRC3Q06683 689 aa1.8□□□□□ -2.12
PRP42YDR235W ASK1P35734 292 aa1.79□□□□□ -2.12
PRP42YDR235W YBR284WP38150 797 aa1.79□□□□□ -2.12
PRP42YDR235W SLX1P38324 304 aa1.79□□□□□ -2.12
PRP42YDR235W KSP1P38691 1029 aaKnown RBP1.79□□□□□ -2.12
PRP42YDR235W SET5P38890 526 aaKnown RBP1.79□□□□□ -2.12
PRP42YDR235W PCI8P40512 444 aa1.79□□□□□ -2.12
PRP42YDR235W ENP2P48234 707 aaKnown RBP1.79□□□□□ -2.12
PRP42YDR235W NUP53Q03790 475 aa1.79□□□□□ -2.12
PRP42YDR235W NDD1Q08887 554 aa1.79□□□□□ -2.12
PRP42YDR235W HRP1Q99383 534 aaKnown RBP1.79□□□□□ -2.12
PRP42YDR235W CDC11P32458 415 aa1.78□□□□□ -2.12
PRP42YDR235W SCT1P32784 759 aa1.78□□□□□ -2.12
PRP42YDR235W CRP1P38845 465 aaKnown RBP1.78□□□□□ -2.12
PRP42YDR235W OPI10Q08202 246 aa1.78□□□□□ -2.12
PRP42YDR235W BMS1Q08965 1183 aaKnown RBP1.78□□□□□ -2.12
PRP42YDR235W FRE7Q12333 620 aa1.78□□□□□ -2.12
PRP42YDR235W MDM20Q12387 796 aaKnown RBP1.78□□□□□ -2.12
PRP42YDR235W ABF1P14164 731 aa1.77□□□□□ -2.13
PRP42YDR235W PRP9P19736 530 aaKnown RBP1.77□□□□□ -2.13
PRP42YDR235W ADE2P21264 571 aaKnown RBP1.77□□□□□ -2.13
PRP42YDR235W ERG6P25087 383 aaKnown RBP1.77□□□□□ -2.13
PRP42YDR235W APL2P36000 726 aaPredicted RBP1.77□□□□□ -2.13
PRP42YDR235W YKL069WP36088 180 aa1.77□□□□□ -2.13
PRP42YDR235W MET30P39014 640 aa1.77□□□□□ -2.13
PRP42YDR235W PIP2P52960 996 aa1.77□□□□□ -2.13
PRP42YDR235W ZIP2P53061 704 aa1.77□□□□□ -2.13
PRP42YDR235W ATP23P53722 227 aa1.77□□□□□ -2.13
PRP42YDR235W ERG13P54839 491 aaKnown RBP1.77□□□□□ -2.13
PRP42YDR235W ARG7Q04728 441 aa1.77□□□□□ -2.13
PRP42YDR235W TPK2P06245 380 aa1.77□□□□□ -2.13
PRP42YDR235W JHD1P40034 492 aa1.77□□□□□ -2.13
PRP42YDR235W IRR1P40541 1150 aa1.77□□□□□ -2.13
PRP42YDR235W MNT3P40549 630 aa1.77□□□□□ -2.13
PRP42YDR235W NMA2P53204 395 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 33.6 ms