RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	SFB2	P53953	876 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	SRT1	Q03175	343 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	AVO1	Q08236	1176 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	YLL058W	Q12198	575 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	TY1A-NL1	Q12391	440 aa	Known RBP	3.17	□□□□□ -1.9
SPB1	YCL054W	YBR182C-A	Q8TGU6	64 aa		3.17	□□□□□ -1.9
SPB1	YCL054W	BIT2	P38346	545 aa		3.16	□□□□□ -1.9
SPB1	YCL054W	TAD1	P53065	400 aa		3.16	□□□□□ -1.9
SPB1	YCL054W	EAR1	Q03212	550 aa		3.16	□□□□□ -1.9
SPB1	YCL054W	LRS4	Q04087	347 aa	Known RBP	3.16	□□□□□ -1.9
SPB1	YCL054W	VMS1	Q04311	632 aa	Known RBP	3.16	□□□□□ -1.9
SPB1	YCL054W	CIA1	Q05583	330 aa		3.16	□□□□□ -1.9
SPB1	YCL054W	YSC84	P32793	468 aa		3.16	□□□□□ -1.9
SPB1	YCL054W	UBC9	P50623	157 aa	Predicted RBP	3.16	□□□□□ -1.9
SPB1	YCL054W	HOS3	Q02959	697 aa	Known RBP	3.16	□□□□□ -1.9
SPB1	YCL054W	DOT1	Q04089	582 aa	Known RBP	3.16	□□□□□ -1.9
SPB1	YCL054W	NHX1	Q04121	633 aa		3.16	□□□□□ -1.9
SPB1	YCL054W	ECM38	Q05902	660 aa	Predicted RBP	3.16	□□□□□ -1.9
SPB1	YCL054W	RPS21B	Q3E754	87 aa	Known RBP	3.16	□□□□□ -1.9
SPB1	YCL054W	DBF20	P32328	564 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	SCT1	P32784	759 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	SMY2	P32909	740 aa	Known RBP	3.15	□□□□□ -1.91
SPB1	YCL054W	FAT1	P38225	669 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	ENV11	P53246	860 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	PHM6	Q05637	104 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	MLC2	Q06580	163 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	YOR223W	Q12015	292 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	ATP12	P22135	325 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	MPE1	P35728	441 aa	Known RBP	3.15	□□□□□ -1.91
SPB1	YCL054W	HSE1	P38753	452 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	UBP5	P39944	805 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	HIS6	P40545	261 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	RET2	P43621	546 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	ALT1	P52893	592 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	NPY1	P53164	384 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	CEG1	Q01159	459 aa	Predicted RBP	3.15	□□□□□ -1.91
SPB1	YCL054W	XYL2	Q07993	356 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	HFI1	Q12060	488 aa		3.15	□□□□□ -1.91
SPB1	YCL054W	SAM35	P14693	329 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	ACE2	P21192	770 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	CDC48	P25694	835 aa	Known RBP	3.14	□□□□□ -1.91
SPB1	YCL054W	DPB3	P27344	201 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	NNK1	P36003	928 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	GPT2	P36148	743 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	YER158C	P40095	573 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	QRI7	P43122	407 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	HDA1	P53973	706 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	YDR514C	Q04408	483 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	DCS2	Q12123	353 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	RMP1	Q12530	201 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	APM4	Q99186	491 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	PDR11	P40550	1411 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	HAP1	P0CE41	1502 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	COX11	P19516	300 aa	Known RBP	3.14	□□□□□ -1.91
SPB1	YCL054W	DAL7	P21826	554 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	DID4	P36108	232 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	YKR051W	P36142	418 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	YGR153W	P48238	217 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	MOT3	P54785	490 aa	Known RBP	3.14	□□□□□ -1.91
SPB1	YCL054W	YML131W	Q03102	365 aa		3.14	□□□□□ -1.91
SPB1	YCL054W	NAM7	P30771	971 aa	Known RBP	3.13	□□□□□ -1.91
SPB1	YCL054W	OAF3	P36023	863 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	MNN4	P36044	1178 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	ERR3	P42222	437 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	ECL1	P48235	211 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	PRP43	P53131	767 aa	Known RBP	3.13	□□□□□ -1.91
SPB1	YCL054W	ARP4	P80428	489 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	PUS7	Q08647	676 aa	Known RBP	3.13	□□□□□ -1.91
SPB1	YCL054W	RRI2	Q12348	645 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	Q0142	Q9ZZW4	58 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	GCN2	P15442	1659 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	KRE5	P22023	1365 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	TY1B-NL2	Q99337	1749 aa	Known RBP	3.13	□□□□□ -1.91
SPB1	YCL054W	ACA1	P39970	489 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	HOS4	P40480	1083 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	RLP7	P40693	322 aa	Known RBP	3.13	□□□□□ -1.91
SPB1	YCL054W	HFM1	P51979	1187 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	SKY1	Q03656	742 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	YOL087C	Q99247	1116 aa		3.13	□□□□□ -1.91
SPB1	YCL054W	FUN30	P31380	1131 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	YKL133C	P36066	463 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	ABZ1	P37254	787 aa	Predicted RBP	3.12	□□□□□ -1.91
SPB1	YCL054W	CTH1	P47976	325 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	CNM67	P53865	581 aa	Known RBP	3.12	□□□□□ -1.91
SPB1	YCL054W	THI21	Q08975	551 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	YLR149C	Q99296	730 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	CDC26	P14724	124 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	HSL7	P38274	827 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	TDA3	P38758	523 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	AIM21	P40563	679 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	NIT3	P49954	291 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	TNA1	P53322	534 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	RIA1	P53893	1110 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	TRS130	Q03660	1102 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	TPP1	Q03796	238 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	REH1	Q06709	432 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	PEX15	Q08215	383 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	YOR059C	Q08448	450 aa	Known RBP	3.12	□□□□□ -1.91
SPB1	YCL054W	SSP2	Q08646	371 aa		3.12	□□□□□ -1.91
SPB1	YCL054W	ENA1	P13587	1091 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms