RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C ASG1P40467 964 aa7.28□□□□□ -1.24
TDP1YBR223C ZIP2P53061 704 aa7.28□□□□□ -1.24
TDP1YBR223C NOG2P53742 486 aaKnown RBP7.28□□□□□ -1.24
TDP1YBR223C ROD1Q02805 837 aa7.28□□□□□ -1.24
TDP1YBR223C YML119WQ03208 357 aa7.28□□□□□ -1.24
TDP1YBR223C RNA1P11745 407 aaKnown RBP7.27□□□□□ -1.25
TDP1YBR223C IME1P21190 360 aa7.27□□□□□ -1.25
TDP1YBR223C MRPL25P23369 157 aa7.27□□□□□ -1.25
TDP1YBR223C TVP38P36164 337 aa7.27□□□□□ -1.25
TDP1YBR223C HEK2P38199 381 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
TDP1YBR223C YBR062CP38239 180 aa7.27□□□□□ -1.25
TDP1YBR223C POP4P38336 279 aa7.27□□□□□ -1.25
TDP1YBR223C VAB2P40003 282 aa7.27□□□□□ -1.25
TDP1YBR223C FTR1P40088 404 aa7.27□□□□□ -1.25
TDP1YBR223C SBE2P42223 864 aaKnown RBP7.27□□□□□ -1.25
TDP1YBR223C INP52P50942 1183 aa7.27□□□□□ -1.25
TDP1YBR223C PEX29Q03370 554 aa7.27□□□□□ -1.25
TDP1YBR223C STE20Q03497 939 aaKnown RBP7.27□□□□□ -1.25
TDP1YBR223C UFO1Q04511 668 aa7.27□□□□□ -1.25
TDP1YBR223C ERV41Q04651 352 aa7.27□□□□□ -1.25
TDP1YBR223C NOB1Q08444 459 aaKnown RBP7.27□□□□□ -1.25
TDP1YBR223C MPC54Q08550 464 aa7.27□□□□□ -1.25
TDP1YBR223C IES4Q08561 116 aa7.27□□□□□ -1.25
TDP1YBR223C RPS3P05750 240 aaKnown RBP7.27□□□□□ -1.25
TDP1YBR223C VMA2P16140 517 aaKnown RBP7.27□□□□□ -1.25
TDP1YBR223C RNR1P21524 888 aaKnown RBP7.27□□□□□ -1.25
TDP1YBR223C PDB1P32473 366 aaKnown RBP7.27□□□□□ -1.25
TDP1YBR223C GYP6P32806 458 aa7.27□□□□□ -1.25
TDP1YBR223C HEL1P36113 551 aa7.27□□□□□ -1.25
TDP1YBR223C REG2P38232 338 aa7.27□□□□□ -1.25
TDP1YBR223C DYS1P38791 387 aa7.27□□□□□ -1.25
TDP1YBR223C PMC1P38929 1173 aaPredicted RBP7.27□□□□□ -1.25
TDP1YBR223C PHO86P46956 311 aa7.27□□□□□ -1.25
TDP1YBR223C DAS1P47005 663 aa7.27□□□□□ -1.25
TDP1YBR223C ORC5P50874 479 aa7.27□□□□□ -1.25
TDP1YBR223C YML6P51998 286 aa7.27□□□□□ -1.25
TDP1YBR223C SHE10P53075 577 aa7.27□□□□□ -1.25
TDP1YBR223C PPM1Q04081 328 aa7.27□□□□□ -1.25
TDP1YBR223C CMS1Q07897 291 aaKnown RBP7.27□□□□□ -1.25
TDP1YBR223C DED1P06634 604 aaKnown RBP7.26□□□□□ -1.25
TDP1YBR223C GCR1P07261 785 aa7.26□□□□□ -1.25
TDP1YBR223C YML002WP0CF17 737 aa7.26□□□□□ -1.25
TDP1YBR223C NAT1P12945 854 aaKnown RBP7.26□□□□□ -1.25
TDP1YBR223C CBF1P17106 351 aa7.26□□□□□ -1.25
TDP1YBR223C PRP4P20053 465 aaKnown RBP7.26□□□□□ -1.25
TDP1YBR223C SFL1P20134 766 aa7.26□□□□□ -1.25
TDP1YBR223C TKL1P23254 680 aaKnown RBP7.26□□□□□ -1.25
TDP1YBR223C YDJ1P25491 409 aaKnown RBP7.26□□□□□ -1.25
TDP1YBR223C SEG2P34250 1132 aa7.26□□□□□ -1.25
TDP1YBR223C EAF5P39995 279 aa7.26□□□□□ -1.25
TDP1YBR223C TDA10P42938 290 aa7.26□□□□□ -1.25
TDP1YBR223C SCD6P45978 349 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
TDP1YBR223C ASN1P49089 572 aaKnown RBP7.26□□□□□ -1.25
TDP1YBR223C GTR1Q00582 310 aa7.26□□□□□ -1.25
TDP1YBR223C IVY1Q04934 453 aa7.26□□□□□ -1.25
TDP1YBR223C COQ9Q05779 260 aa7.26□□□□□ -1.25
TDP1YBR223C AI5_BETAQ9ZZX0 354 aa7.26□□□□□ -1.25
TDP1YBR223C THS1P04801 734 aaKnown RBP7.25□□□□□ -1.25
TDP1YBR223C CMD1P06787 147 aaKnown RBP7.25□□□□□ -1.25
TDP1YBR223C ADE3P07245 946 aaKnown RBP7.25□□□□□ -1.25
TDP1YBR223C TUB3P09734 445 aaKnown RBP7.25□□□□□ -1.25
TDP1YBR223C CDC42P19073 191 aa7.25□□□□□ -1.25
TDP1YBR223C GAL11P19659 1081 aa7.25□□□□□ -1.25
TDP1YBR223C RTG2P32608 588 aaKnown RBP7.25□□□□□ -1.25
TDP1YBR223C AIM21P40563 679 aa7.25□□□□□ -1.25
TDP1YBR223C YNL146WP53906 100 aa7.25□□□□□ -1.25
TDP1YBR223C COG6P53959 839 aa7.25□□□□□ -1.25
TDP1YBR223C YDR090CQ03193 310 aa7.25□□□□□ -1.25
TDP1YBR223C VPS16Q03308 798 aa7.25□□□□□ -1.25
TDP1YBR223C YMR027WQ04371 470 aa7.25□□□□□ -1.25
TDP1YBR223C SPC24Q04477 213 aa7.25□□□□□ -1.25
TDP1YBR223C GPI13Q07830 1017 aa7.25□□□□□ -1.25
TDP1YBR223C ERP3Q12403 225 aa7.25□□□□□ -1.25
TDP1YBR223C CDC19P00549 500 aaKnown RBP7.24□□□□□ -1.25
TDP1YBR223C ILV2P07342 687 aaKnown RBP7.24□□□□□ -1.25
TDP1YBR223C HEM15P16622 393 aa7.24□□□□□ -1.25
TDP1YBR223C AEP2P22136 580 aa7.24□□□□□ -1.25
TDP1YBR223C MGT1P26188 188 aa7.24□□□□□ -1.25
TDP1YBR223C NIP1P32497 812 aaKnown RBP7.24□□□□□ -1.25
TDP1YBR223C ABD1P32783 436 aaPredicted RBP7.24□□□□□ -1.25
TDP1YBR223C RAD5P32849 1169 aaPredicted RBP7.24□□□□□ -1.25
TDP1YBR223C SWE1P32944 819 aa7.24□□□□□ -1.25
TDP1YBR223C PCA1P38360 1216 aa7.24□□□□□ -1.25
TDP1YBR223C CBR1P38626 284 aaKnown RBP7.24□□□□□ -1.25
TDP1YBR223C APM2P38700 605 aa7.24□□□□□ -1.25
TDP1YBR223C RIX1P38883 763 aaPredicted RBP7.24□□□□□ -1.25
TDP1YBR223C GPB2P39717 880 aa7.24□□□□□ -1.25
TDP1YBR223C YEL025CP39991 1188 aa7.24□□□□□ -1.25
TDP1YBR223C TMN3P40071 706 aa7.24□□□□□ -1.25
TDP1YBR223C RGD2P43556 714 aa7.24□□□□□ -1.25
TDP1YBR223C ILM1P47155 203 aa7.24□□□□□ -1.25
TDP1YBR223C CUL3P53202 744 aa7.24□□□□□ -1.25
TDP1YBR223C MDR1P53258 950 aa7.24□□□□□ -1.25
TDP1YBR223C YAF9P53930 226 aa7.24□□□□□ -1.25
TDP1YBR223C FAP1P53971 965 aa7.24□□□□□ -1.25
TDP1YBR223C SUB1P54000 292 aaKnown RBP7.24□□□□□ -1.25
TDP1YBR223C VPS72Q03388 795 aa7.24□□□□□ -1.25
TDP1YBR223C SLD5Q03406 294 aa7.24□□□□□ -1.25
TDP1YBR223C VHS3Q08438 674 aa7.24□□□□□ -1.25
TDP1YBR223C YOR059CQ08448 450 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms