RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C DLD1P32891 587 aa6.06□□□□□ -1.44
PDB1YBR221C YER034WP40022 185 aaKnown RBP6.06□□□□□ -1.44
PDB1YBR221C SBE2P42223 864 aaKnown RBP6.06□□□□□ -1.44
PDB1YBR221C GZF3P42944 551 aaKnown RBP6.06□□□□□ -1.44
PDB1YBR221C AGX1P43567 385 aa6.06□□□□□ -1.44
PDB1YBR221C POL31P46957 487 aa6.06□□□□□ -1.44
PDB1YBR221C MAD3P47074 515 aa6.06□□□□□ -1.44
PDB1YBR221C RAD17P48581 401 aa6.06□□□□□ -1.44
PDB1YBR221C FDC1Q03034 503 aa6.06□□□□□ -1.44
PDB1YBR221C UTP21Q06078 939 aaPredicted RBP6.06□□□□□ -1.44
PDB1YBR221C YIL177CP40434 1758 aa6.06□□□□□ -1.44
PDB1YBR221C YJL225CP40889 1758 aa6.06□□□□□ -1.44
PDB1YBR221C SEM1O94742 89 aa6.05□□□□□ -1.44
PDB1YBR221C PRT1P06103 763 aaKnown RBP6.05□□□□□ -1.44
PDB1YBR221C RPB2P08518 1224 aaKnown RBP6.05□□□□□ -1.44
PDB1YBR221C SEC18P18759 758 aaKnown RBP6.05□□□□□ -1.44
PDB1YBR221C RAD53P22216 821 aa6.05□□□□□ -1.44
PDB1YBR221C NTG1P31378 399 aa6.05□□□□□ -1.44
PDB1YBR221C MTH1P35198 433 aa6.05□□□□□ -1.44
PDB1YBR221C RFC1P38630 861 aaKnown RBP6.05□□□□□ -1.44
PDB1YBR221C YLF2P38746 405 aa6.05□□□□□ -1.44
PDB1YBR221C PEX18P38855 283 aa6.05□□□□□ -1.44
PDB1YBR221C CCC2P38995 1004 aa6.05□□□□□ -1.44
PDB1YBR221C KHA1P40309 873 aa6.05□□□□□ -1.44
PDB1YBR221C RIC1P40395 1056 aa6.05□□□□□ -1.44
PDB1YBR221C AIM20P40451 204 aa6.05□□□□□ -1.44
PDB1YBR221C YIL089WP40500 205 aa6.05□□□□□ -1.44
PDB1YBR221C CCT7P42943 550 aaKnown RBP6.05□□□□□ -1.44
PDB1YBR221C NUP84P52891 726 aa6.05□□□□□ -1.44
PDB1YBR221C AIM14P53109 570 aa6.05□□□□□ -1.44
PDB1YBR221C SLD3P53135 668 aa6.05□□□□□ -1.44
PDB1YBR221C SFB2P53953 876 aa6.05□□□□□ -1.44
PDB1YBR221C TIM10P87108 93 aa6.05□□□□□ -1.44
PDB1YBR221C PEX25Q02969 394 aa6.05□□□□□ -1.44
PDB1YBR221C RRN5Q02983 363 aa6.05□□□□□ -1.44
PDB1YBR221C ISR1Q06098 443 aaKnown RBP6.05□□□□□ -1.44
PDB1YBR221C YOL114CQ12322 202 aa6.05□□□□□ -1.44
PDB1YBR221C GYP5Q12344 894 aa6.05□□□□□ -1.44
PDB1YBR221C HBN1Q96VH4 193 aa6.05□□□□□ -1.44
PDB1YBR221C FLP1P03870 423 aa6.04□□□□□ -1.44
PDB1YBR221C SRD1P09007 221 aa6.04□□□□□ -1.44
PDB1YBR221C KAR3P17119 729 aa6.04□□□□□ -1.44
PDB1YBR221C DIT1P21623 536 aa6.04□□□□□ -1.44
PDB1YBR221C MNE1P24720 663 aa6.04□□□□□ -1.44
PDB1YBR221C RSC6P25632 483 aa6.04□□□□□ -1.44
PDB1YBR221C PCL2P25693 308 aa6.04□□□□□ -1.44
PDB1YBR221C MSH1P25846 959 aa6.04□□□□□ -1.44
PDB1YBR221C SEC21P32074 935 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C SSE1P32589 693 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C UGA4P32837 571 aa6.04□□□□□ -1.44
PDB1YBR221C PPQ1P32945 549 aa6.04□□□□□ -1.44
PDB1YBR221C SLC1P33333 303 aa6.04□□□□□ -1.44
PDB1YBR221C AMN1P38285 549 aaPredicted RBP6.04□□□□□ -1.44
PDB1YBR221C REI1P38344 393 aaPredicted RBP6.04□□□□□ -1.44
PDB1YBR221C CTM1P38818 585 aa6.04□□□□□ -1.44
PDB1YBR221C VPS45P38932 577 aa6.04□□□□□ -1.44
PDB1YBR221C ILV3P39522 585 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C SAH1P39954 449 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C YEL068CP39977 110 aa6.04□□□□□ -1.44
PDB1YBR221C ARB1P40024 610 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C LSM5P40089 93 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C FMP10P40098 244 aa6.04□□□□□ -1.44
PDB1YBR221C YJL068CP40363 299 aa6.04□□□□□ -1.44
PDB1YBR221C SEC28P40509 296 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C CIR1P42940 261 aa6.04□□□□□ -1.44
PDB1YBR221C CIT3P43635 486 aa6.04□□□□□ -1.44
PDB1YBR221C MNN11P46985 422 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C YJL055WP47044 245 aa6.04□□□□□ -1.44
PDB1YBR221C GNP1P48813 663 aa6.04□□□□□ -1.44
PDB1YBR221C RPA14P50106 137 aa6.04□□□□□ -1.44
PDB1YBR221C YNL247WP53852 767 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C ERV25P54837 211 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C CTR9P89105 1077 aa6.04□□□□□ -1.44
PDB1YBR221C CIK1Q01649 594 aa6.04□□□□□ -1.44
PDB1YBR221C DPB4Q04603 196 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C YLR225CQ05948 407 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C NFI1Q12216 726 aa6.04□□□□□ -1.44
PDB1YBR221C ISA2Q12425 185 aa6.04□□□□□ -1.44
PDB1YBR221C TIF6Q12522 245 aaKnown RBP6.04□□□□□ -1.44
PDB1YBR221C YER152CP10356 443 aa6.03□□□□□ -1.44
PDB1YBR221C RAD18P10862 487 aa6.03□□□□□ -1.44
PDB1YBR221C OM45P16547 393 aa6.03□□□□□ -1.44
PDB1YBR221C MRPL33P20084 86 aa6.03□□□□□ -1.44
PDB1YBR221C SFL1P20134 766 aa6.03□□□□□ -1.44
PDB1YBR221C PRP28P23394 588 aa6.03□□□□□ -1.44
PDB1YBR221C NAM7P30771 971 aaKnown RBP6.03□□□□□ -1.44
PDB1YBR221C XRS2P33301 854 aa6.03□□□□□ -1.44
PDB1YBR221C IXR1P33417 597 aa6.03□□□□□ -1.44
PDB1YBR221C UIP5P36137 443 aa6.03□□□□□ -1.44
PDB1YBR221C GDI1P39958 451 aaKnown RBP6.03□□□□□ -1.44
PDB1YBR221C FOL2P51601 243 aaKnown RBP6.03□□□□□ -1.44
PDB1YBR221C YGL140CP53120 1219 aa6.03□□□□□ -1.44
PDB1YBR221C CNM67P53865 581 aaKnown RBP6.03□□□□□ -1.44
PDB1YBR221C ADA2Q02336 434 aa6.03□□□□□ -1.44
PDB1YBR221C FCP1Q03254 732 aa6.03□□□□□ -1.44
PDB1YBR221C CDC73Q06697 393 aa6.03□□□□□ -1.44
PDB1YBR221C GUD1Q07729 489 aa6.03□□□□□ -1.44
PDB1YBR221C PEX15Q08215 383 aa6.03□□□□□ -1.44
PDB1YBR221C VHS3Q08438 674 aa6.03□□□□□ -1.44
PDB1YBR221C SAM3Q08986 587 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms