RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C GAL11P19659 1081 aa4.07□□□□□ -1.76
RPB5YBR154C HIR1P32479 840 aa4.07□□□□□ -1.76
RPB5YBR154C BET3P36149 193 aa4.07□□□□□ -1.76
RPB5YBR154C CCT3P39077 534 aaKnown RBP4.07□□□□□ -1.76
RPB5YBR154C ALY2P47029 1046 aa4.07□□□□□ -1.76
RPB5YBR154C PRP31P49704 494 aaPredicted RBP4.07□□□□□ -1.76
RPB5YBR154C TEX1P53851 422 aaKnown RBP4.07□□□□□ -1.76
RPB5YBR154C APM1Q00776 475 aaPredicted RBP4.07□□□□□ -1.76
RPB5YBR154C CTK1Q03957 528 aaKnown RBP4.07□□□□□ -1.76
RPB5YBR154C YKL033W-AQ86ZR7 236 aa4.07□□□□□ -1.76
RPB5YBR154C CAN1P04817 590 aa4.06□□□□□ -1.76
RPB5YBR154C APT2P36973 181 aa4.06□□□□□ -1.76
RPB5YBR154C RSP5P39940 809 aaKnown RBP4.06□□□□□ -1.76
RPB5YBR154C RPN13O13563 156 aa4.05□□□□□ -1.76
RPB5YBR154C PYC1P11154 1178 aaKnown RBP4.05□□□□□ -1.76
RPB5YBR154C SPO11P23179 398 aa4.05□□□□□ -1.76
RPB5YBR154C ADY2P25613 283 aa4.05□□□□□ -1.76
RPB5YBR154C ARG2P40360 574 aa4.05□□□□□ -1.76
RPB5YBR154C NDC80P40460 691 aa4.05□□□□□ -1.76
RPB5YBR154C HXT16P47185 567 aa4.05□□□□□ -1.76
RPB5YBR154C HUL5P53119 910 aa4.05□□□□□ -1.76
RPB5YBR154C ORC4P54791 529 aa4.05□□□□□ -1.76
RPB5YBR154C HOF1Q05080 669 aa4.05□□□□□ -1.76
RPB5YBR154C ARO10Q06408 635 aa4.05□□□□□ -1.76
RPB5YBR154C TAF3Q12297 353 aa4.05□□□□□ -1.76
RPB5YBR154C SIR3P06701 978 aa4.04□□□□□ -1.76
RPB5YBR154C PER1P25625 357 aa4.04□□□□□ -1.76
RPB5YBR154C GLG1P36143 616 aa4.04□□□□□ -1.76
RPB5YBR154C CTR1P49573 406 aa4.04□□□□□ -1.76
RPB5YBR154C MVD1P32377 396 aaKnown RBP4.03□□□□□ -1.76
RPB5YBR154C APL2P36000 726 aaPredicted RBP4.03□□□□□ -1.76
RPB5YBR154C TRZ1P36159 838 aaPredicted RBP4.03□□□□□ -1.76
RPB5YBR154C BDH2P39713 417 aa4.03□□□□□ -1.76
RPB5YBR154C RTA1P53047 317 aa4.03□□□□□ -1.76
RPB5YBR154C FLO10P36170 1169 aa4.02□□□□□ -1.77
RPB5YBR154C YFL052WP43551 465 aa4.02□□□□□ -1.77
RPB5YBR154C PAN2P53010 1115 aaPredicted RBP4.02□□□□□ -1.77
RPB5YBR154C MCM21Q06675 368 aa4.02□□□□□ -1.77
RPB5YBR154C AFT2Q08957 416 aa4.02□□□□□ -1.77
RPB5YBR154C CLF1Q12309 687 aaPredicted RBP4.02□□□□□ -1.77
RPB5YBR154C ADE2P21264 571 aaKnown RBP4.01□□□□□ -1.77
RPB5YBR154C SFB3P38810 929 aa4.01□□□□□ -1.77
RPB5YBR154C FMO1P38866 432 aa4.01□□□□□ -1.77
RPB5YBR154C RPN10P38886 268 aaKnown RBP4.01□□□□□ -1.77
RPB5YBR154C NUP60P39705 539 aa4.01□□□□□ -1.77
RPB5YBR154C YEL020CP39994 560 aa4.01□□□□□ -1.77
RPB5YBR154C BNA2P47125 453 aa4.01□□□□□ -1.77
RPB5YBR154C MTL1P53214 551 aa4.01□□□□□ -1.77
RPB5YBR154C ARG5,6Q01217 863 aa4.01□□□□□ -1.77
RPB5YBR154C CDC53Q12018 815 aaKnown RBP4.01□□□□□ -1.77
RPB5YBR154C STI1P15705 589 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
RPB5YBR154C CCR4P31384 837 aaKnown RBP4□□□□□ -1.77
RPB5YBR154C YHR112CP38716 378 aa4□□□□□ -1.77
RPB5YBR154C CCT7P42943 550 aaKnown RBP4□□□□□ -1.77
RPB5YBR154C TY4A-JP47023 414 aa4□□□□□ -1.77
RPB5YBR154C ATG4P53867 494 aa4□□□□□ -1.77
RPB5YBR154C YDR338CQ05497 695 aa4□□□□□ -1.77
RPB5YBR154C GDH3P39708 457 aa3.99□□□□□ -1.77
RPB5YBR154C CHZ1P40019 153 aaPredicted RBP3.99□□□□□ -1.77
RPB5YBR154C UBC9P50623 157 aaPredicted RBP3.99□□□□□ -1.77
RPB5YBR154C NPY1P53164 384 aa3.99□□□□□ -1.77
RPB5YBR154C REC102Q02721 264 aa3.99□□□□□ -1.77
RPB5YBR154C YOR131CQ12486 218 aa3.99□□□□□ -1.77
RPB5YBR154C MDM10P18409 493 aa3.98□□□□□ -1.77
RPB5YBR154C STO1P34160 861 aaKnown RBP3.98□□□□□ -1.77
RPB5YBR154C MTC2P34246 357 aa3.98□□□□□ -1.77
RPB5YBR154C PHO11P35842 467 aa3.98□□□□□ -1.77
RPB5YBR154C PHO12P38693 467 aa3.98□□□□□ -1.77
RPB5YBR154C MIP6P38760 659 aaKnown RBP3.98□□□□□ -1.77
RPB5YBR154C FHN1P53279 174 aa3.98□□□□□ -1.77
RPB5YBR154C THI7Q05998 598 aa3.98□□□□□ -1.77
RPB5YBR154C EMP70P32802 667 aa3.97□□□□□ -1.77
RPB5YBR154C ORC2P32833 620 aa3.97□□□□□ -1.77
RPB5YBR154C MCD4P36051 919 aa3.97□□□□□ -1.77
RPB5YBR154C LYS9P38999 446 aa3.97□□□□□ -1.77
RPB5YBR154C NSE3Q05541 303 aa3.97□□□□□ -1.77
RPB5YBR154C ZRT2Q12436 422 aa3.97□□□□□ -1.77
RPB5YBR154C YLR149CQ99296 730 aa3.97□□□□□ -1.77
RPB5YBR154C NNF1P47149 201 aa3.96□□□□□ -1.78
RPB5YBR154C SNP1Q00916 300 aaPredicted RBP3.96□□□□□ -1.78
RPB5YBR154C MRI1Q06489 411 aaKnown RBP3.96□□□□□ -1.78
RPB5YBR154C HRP1Q99383 534 aaKnown RBP3.96□□□□□ -1.78
RPB5YBR154C GSY1P23337 708 aa3.95□□□□□ -1.78
RPB5YBR154C CRP1P38845 465 aaKnown RBP3.95□□□□□ -1.78
RPB5YBR154C HRB1P38922 454 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
RPB5YBR154C PAC2P39937 518 aa3.95□□□□□ -1.78
RPB5YBR154C CAF16P43569 289 aa3.95□□□□□ -1.78
RPB5YBR154C MRK1P50873 501 aa3.95□□□□□ -1.78
RPB5YBR154C RPN7Q06103 429 aaKnown RBP3.95□□□□□ -1.78
RPB5YBR154C DIA2Q08496 732 aaPredicted RBP3.95□□□□□ -1.78
RPB5YBR154C ABF1P14164 731 aa3.94□□□□□ -1.78
RPB5YBR154C RNR1P21524 888 aaKnown RBP3.94□□□□□ -1.78
RPB5YBR154C GMH1P36125 273 aa3.94□□□□□ -1.78
RPB5YBR154C HSL7P38274 827 aa3.94□□□□□ -1.78
RPB5YBR154C UBS1P38290 277 aa3.94□□□□□ -1.78
RPB5YBR154C MUP3P38734 546 aa3.94□□□□□ -1.78
RPB5YBR154C SLK19Q08581 821 aaKnown RBP3.94□□□□□ -1.78
RPB5YBR154C MLH3Q12083 715 aa3.94□□□□□ -1.78
RPB5YBR154C USV1Q12132 391 aa3.94□□□□□ -1.78
RPB5YBR154C ICT1Q12385 394 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms