RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 CLIP2Q9UDT6 1046 aa18.63■□□□□ 0.57
ARHGEF1-219ENST00000599846 KINO60870 393 aaKnown RBP18.63■□□□□ 0.57
ARHGEF1-219ENST00000599846 TPM3P06753 285 aa18.63■□□□□ 0.57
ARHGEF1-219ENST00000599846 TPD52L1Q16890 204 aaPredicted RBP18.62■□□□□ 0.57
ARHGEF1-219ENST00000599846 HSP90AB3PQ58FF7 597 aa18.62■□□□□ 0.57
ARHGEF1-219ENST00000599846 CCAR1Q8IX12 1150 aaKnown RBP18.62■□□□□ 0.57
ARHGEF1-219ENST00000599846 KCNF1Q9H3M0 494 aa18.62■□□□□ 0.57
ARHGEF1-219ENST00000599846 IFIT1P09914 478 aaKnown RBP18.61■□□□□ 0.57
ARHGEF1-219ENST00000599846 SCRN1Q12765 414 aa18.61■□□□□ 0.57
ARHGEF1-219ENST00000599846 KIAA1524Q8TCG1 905 aa18.61■□□□□ 0.57
ARHGEF1-219ENST00000599846 PGBD1Q96JS3 809 aa18.61■□□□□ 0.57
ARHGEF1-219ENST00000599846 PHKG2P15735 406 aa18.61■□□□□ 0.57
ARHGEF1-219ENST00000599846 ATF3P18847 181 aa18.61■□□□□ 0.57
ARHGEF1-219ENST00000599846 RIOK3O14730 519 aaKnown RBP18.61■□□□□ 0.57
ARHGEF1-219ENST00000599846 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
ARHGEF1-219ENST00000599846 ERBB3P21860 1342 aa18.61■□□□□ 0.57
ARHGEF1-219ENST00000599846 A0A0G2JS52 829 aa18.6■□□□□ 0.57
ARHGEF1-219ENST00000599846 PTPDC1A2A3K4 754 aa18.6■□□□□ 0.57
ARHGEF1-219ENST00000599846 SPDYE4A6NLX3 237 aa18.6■□□□□ 0.57
ARHGEF1-219ENST00000599846 PDIA4P13667 645 aaKnown RBP18.6■□□□□ 0.57
ARHGEF1-219ENST00000599846 OTUD7BQ6GQQ9 843 aa18.6■□□□□ 0.57
ARHGEF1-219ENST00000599846 CLSTN2Q9H4D0 955 aa18.6■□□□□ 0.57
ARHGEF1-219ENST00000599846 PAG1Q9NWQ8 432 aa18.6■□□□□ 0.57
ARHGEF1-219ENST00000599846 POLR3DP05423 398 aaPredicted RBP18.6■□□□□ 0.57
ARHGEF1-219ENST00000599846 KCNB2Q92953 911 aa18.6■□□□□ 0.57
ARHGEF1-219ENST00000599846 PPP4R3BQ5MIZ7 849 aa18.59■□□□□ 0.57
ARHGEF1-219ENST00000599846 TTLL5Q6EMB2 1281 aa18.59■□□□□ 0.57
ARHGEF1-219ENST00000599846 A0A0G2JLW4 131 aa18.59■□□□□ 0.57
ARHGEF1-219ENST00000599846 CPLX1O14810 134 aa18.59■□□□□ 0.57
ARHGEF1-219ENST00000599846 DHX32Q7L7V1 743 aaKnown RBP18.59■□□□□ 0.57
ARHGEF1-219ENST00000599846 CACNA1FO60840 1977 aa18.58■□□□□ 0.57
ARHGEF1-219ENST00000599846 FSIP1Q8NA03 581 aa18.58■□□□□ 0.57
ARHGEF1-219ENST00000599846 A1BGP04217 495 aa18.58■□□□□ 0.56
ARHGEF1-219ENST00000599846 KBTBD3Q8NAB2 608 aa18.58■□□□□ 0.56
ARHGEF1-219ENST00000599846 ELP1O95163 1332 aa18.58■□□□□ 0.56
ARHGEF1-219ENST00000599846 TNNT1P13805 278 aa18.58■□□□□ 0.56
ARHGEF1-219ENST00000599846 TTLL7Q6ZT98 887 aa18.58■□□□□ 0.56
ARHGEF1-219ENST00000599846 TRMT1Q9NXH9 659 aaKnown RBP18.58■□□□□ 0.56
ARHGEF1-219ENST00000599846 ZSCAN16Q9H4T2 348 aaPredicted RBP18.57■□□□□ 0.56
ARHGEF1-219ENST00000599846 APPP05067 770 aa18.57■□□□□ 0.56
ARHGEF1-219ENST00000599846 LRRC24Q50LG9 513 aa18.57■□□□□ 0.56
ARHGEF1-219ENST00000599846 PDCL2Q8N4E4 241 aa18.57■□□□□ 0.56
ARHGEF1-219ENST00000599846 BCL2L12Q9HB09 334 aa18.57■□□□□ 0.56
ARHGEF1-219ENST00000599846 ZNF75DP51815 510 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 STOX1Q6ZVD7 989 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 USP28Q96RU2 1077 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 HAUS7Q99871 368 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 CEP126Q9P2H0 1117 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 BIN1O00499 593 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 GNL2Q13823 731 aaKnown RBP18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 STK38Q15208 465 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 MED23Q9ULK4 1368 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 ARHGAP23Q9P227 1491 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 ISM2Q6H9L7 571 aa18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 ZNF396Q96N95 335 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 GPHNQ9NQX3 736 aaPredicted RBP18.56■□□□□ 0.56
ARHGEF1-219ENST00000599846 NPHP1O15259 732 aa18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 RESTQ13127 1097 aa18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 CWC25Q9NXE8 425 aaPredicted RBP18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 TTC39AQ5SRH9 613 aa18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 DCAF5Q96JK2 942 aa18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 UTYO14607 1347 aa18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 SLIT1O75093 1534 aa18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 CYP27B1O15528 508 aa18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 CCDC57Q2TAC2 916 aa18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 TOM1L2Q6ZVM7 507 aa18.55■□□□□ 0.56
ARHGEF1-219ENST00000599846 A0A1B0GVL5 298 aa18.54■□□□□ 0.56
ARHGEF1-219ENST00000599846 RALYLQ86SE5 291 aaKnown RBP18.54■□□□□ 0.56
ARHGEF1-219ENST00000599846 A0A1B0GUL7 405 aa18.54■□□□□ 0.56
ARHGEF1-219ENST00000599846 ARID5BQ14865 1188 aa18.54■□□□□ 0.56
ARHGEF1-219ENST00000599846 PUS3Q9BZE2 481 aaKnown RBP18.54■□□□□ 0.56
ARHGEF1-219ENST00000599846 NPHP4O75161 1426 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF1-219ENST00000599846 E7EWF7 191 aa18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 ZSCAN25Q6NSZ9 544 aa18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 C11orf57Q6ZUT1 292 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 PLBD2Q8NHP8 589 aa18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 ZNF609O15014 1411 aa18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 RFX5P48382 616 aaPredicted RBP18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 CCDC158Q5M9N0 1113 aa18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 SYNE3Q6ZMZ3 975 aa18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 NSUN7Q8NE18 718 aaKnown RBP18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 SPTLC3Q9NUV7 552 aa18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 HSPD1P10809 573 aaKnown RBP18.53■□□□□ 0.56
ARHGEF1-219ENST00000599846 COL15A1P39059 1388 aa18.52■□□□□ 0.56
ARHGEF1-219ENST00000599846 SMC2O95347 1197 aa18.52■□□□□ 0.56
ARHGEF1-219ENST00000599846 CCDC112Q8NEF3 446 aa18.52■□□□□ 0.56
ARHGEF1-219ENST00000599846 CACTINQ8WUQ7 758 aaKnown RBP18.52■□□□□ 0.56
ARHGEF1-219ENST00000599846 STRN4Q9NRL3 753 aa18.52■□□□□ 0.56
ARHGEF1-219ENST00000599846 AOPEPQ8N6M6 819 aa18.52■□□□□ 0.56
ARHGEF1-219ENST00000599846 CCDC94Q9BW85 323 aaPredicted RBP18.52■□□□□ 0.56
ARHGEF1-219ENST00000599846 STX1AQ16623 288 aa18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 GJB4Q9NTQ9 266 aa18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 STK11IPQ8N1F8 1099 aa18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 C8orf76Q96K31 380 aa18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 LRRC37A3O60309 1634 aa18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 GOLGA8BA8MQT2 603 aa18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 PFKFB2O60825 505 aa18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 USPL1Q5W0Q7 1092 aa18.51■□□□□ 0.55
ARHGEF1-219ENST00000599846 CEP57L1Q8IYX8 460 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms