RNA–Protein interactions for RNA: tC(GCA)P2

tC(GCA)P2, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)P2, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)P2tC(GCA)P2 RAD16P31244 790 aa3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 SKI2P35207 1287 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
tC(GCA)P2tC(GCA)P2 TIF34P40217 347 aaKnown RBP3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 ERG10P41338 398 aaKnown RBP3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 SUM1P46676 1062 aa3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 AVT1P47082 602 aa3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 ALG11P53954 548 aaKnown RBP3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 ROD1Q02805 837 aa3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 NOC3Q07896 663 aaPredicted RBP3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 SMC5Q08204 1093 aa3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 SDH5Q08230 162 aa3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 FLC1Q08967 793 aa3.67□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 HXK1P04806 485 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 RAD3P06839 778 aa3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 YCL042WP25572 119 aa3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 CCR4P31384 837 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 ECM21P38167 1117 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 VID24P38263 362 aa3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 ERV46P39727 415 aa3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 YDR090CQ03193 310 aa3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 OYE2Q03558 400 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 AIM33Q04516 312 aa3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 RKM5Q12367 367 aa3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 YOR111WQ99210 232 aa3.66□□□□□ -1.82
tC(GCA)P2tC(GCA)P2 RPL4AP10664 362 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 STI1P15705 589 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
tC(GCA)P2tC(GCA)P2 PCA1P38360 1216 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 PFS1P38872 237 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 BRE2P43132 505 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 BFA1P47113 574 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 HGH1P48362 394 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 RPL4BP49626 362 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 MRPS35P53292 345 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 SUN4P53616 420 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 SUR7P54003 302 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 HOS3Q02959 697 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 CWC21Q03375 135 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 SEG1Q04279 960 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 TFC6Q06339 672 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 SAM3Q08986 587 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 PUS1Q12211 544 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 RAD50P12753 1312 aa3.65□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 ILV1P00927 576 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 GAL80P04387 435 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 CLN3P13365 580 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 MTF1P14908 341 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 PFK1P16861 987 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 DAL82P21705 255 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 PRR1P28708 518 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 BRF1P29056 596 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 PMI40P29952 429 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 MRX3P38172 270 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 ERC1P38767 581 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 ORC6P38826 435 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 OSW5P40219 148 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 FIS1P40515 155 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 ULP2P40537 1034 aaPredicted RBP3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 ISM1P48526 1002 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YNR065CP53751 1116 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 CNM67P53865 581 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 TDA7P53882 636 aaPredicted RBP3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YNL146WP53906 100 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 SNU56Q03782 492 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YPL066WQ12194 479 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 NDJ1Q12366 352 aa3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 MDN1Q12019 4910 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 REV1P12689 985 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 LYP1P32487 611 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 RER2P35196 286 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YKR051WP36142 418 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 TGL4P36165 910 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 CDC27P38042 758 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 RGD1P38339 666 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 OSH3P38713 996 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 BTT1P40314 149 aaPredicted RBP3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YJR061WP40355 935 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YIL161WP40449 235 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 POL31P46957 487 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 IML2P47031 731 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 VPS70P47161 811 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YMR187CQ03236 431 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 GCN5Q03330 439 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 SMD2Q06217 110 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YCG1Q06680 1035 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YDL057WQ07379 328 aa3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 MAK21Q12176 1025 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 OPI1P21957 404 aa3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 ERG6P25087 383 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 CYS3P31373 394 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 PGM1P33401 570 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 AAP1P37898 856 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 GGA2P38817 585 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 VPS25P47142 202 aa3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 VEL1P53058 206 aa3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 CDD1Q06549 142 aa3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YFT2Q06676 274 aa3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 CDA2Q06703 312 aa3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 YOL073CQ08232 322 aa3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 ALR1Q08269 859 aa3.62□□□□□ -1.83
tC(GCA)P2tC(GCA)P2 IES4Q08561 116 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms