RNA–Protein interactions for RNA: tC(GCA)B

tC(GCA)B, Transcript of Cysteine tRNA (tRNA-Cys), predicted by tRNAscan-SE analysis, yeastyeast

Gene tC(GCA)B, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tC(GCA)BtC(GCA)B RAD16P31244 790 aa3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B SKI2P35207 1287 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
tC(GCA)BtC(GCA)B TIF34P40217 347 aaKnown RBP3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B ERG10P41338 398 aaKnown RBP3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B SUM1P46676 1062 aa3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B AVT1P47082 602 aa3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B ALG11P53954 548 aaKnown RBP3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B ROD1Q02805 837 aa3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B NOC3Q07896 663 aaPredicted RBP3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B SMC5Q08204 1093 aa3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B SDH5Q08230 162 aa3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B FLC1Q08967 793 aa3.67□□□□□ -1.82
tC(GCA)BtC(GCA)B HXK1P04806 485 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B RAD3P06839 778 aa3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B YCL042WP25572 119 aa3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B CCR4P31384 837 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B ECM21P38167 1117 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B VID24P38263 362 aa3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B ERV46P39727 415 aa3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B YDR090CQ03193 310 aa3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B OYE2Q03558 400 aaKnown RBP3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B AIM33Q04516 312 aa3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B RKM5Q12367 367 aa3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B YOR111WQ99210 232 aa3.66□□□□□ -1.82
tC(GCA)BtC(GCA)B RPL4AP10664 362 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B STI1P15705 589 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
tC(GCA)BtC(GCA)B PCA1P38360 1216 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B PFS1P38872 237 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B BRE2P43132 505 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B BFA1P47113 574 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B HGH1P48362 394 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B RPL4BP49626 362 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B MRPS35P53292 345 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B SUN4P53616 420 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B SUR7P54003 302 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B HOS3Q02959 697 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B CWC21Q03375 135 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B SEG1Q04279 960 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B TFC6Q06339 672 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B SAM3Q08986 587 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B PUS1Q12211 544 aaKnown RBP3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B RAD50P12753 1312 aa3.65□□□□□ -1.83
tC(GCA)BtC(GCA)B ILV1P00927 576 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B GAL80P04387 435 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B CLN3P13365 580 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B MTF1P14908 341 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B PFK1P16861 987 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B DAL82P21705 255 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B PRR1P28708 518 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B BRF1P29056 596 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B PMI40P29952 429 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B MRX3P38172 270 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B ERC1P38767 581 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B ORC6P38826 435 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B OSW5P40219 148 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B FIS1P40515 155 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B ULP2P40537 1034 aaPredicted RBP3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B ISM1P48526 1002 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B YNR065CP53751 1116 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B CNM67P53865 581 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B TDA7P53882 636 aaPredicted RBP3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B YNL146WP53906 100 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B SNU56Q03782 492 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B YPL066WQ12194 479 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B NDJ1Q12366 352 aa3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B MDN1Q12019 4910 aaKnown RBP3.64□□□□□ -1.83
tC(GCA)BtC(GCA)B REV1P12689 985 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B LYP1P32487 611 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B RER2P35196 286 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B YKR051WP36142 418 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B TGL4P36165 910 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B CDC27P38042 758 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B RGD1P38339 666 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B OSH3P38713 996 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B BTT1P40314 149 aaPredicted RBP3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B YJR061WP40355 935 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B YIL161WP40449 235 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B POL31P46957 487 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B IML2P47031 731 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B VPS70P47161 811 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B YMR187CQ03236 431 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B GCN5Q03330 439 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B SMD2Q06217 110 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B YCG1Q06680 1035 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B YDL057WQ07379 328 aa3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B MAK21Q12176 1025 aaKnown RBP3.63□□□□□ -1.83
tC(GCA)BtC(GCA)B OPI1P21957 404 aa3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B ERG6P25087 383 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B CYS3P31373 394 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B PGM1P33401 570 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B AAP1P37898 856 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B GGA2P38817 585 aaKnown RBP3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B VPS25P47142 202 aa3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B VEL1P53058 206 aa3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B CDD1Q06549 142 aa3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B YFT2Q06676 274 aa3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B CDA2Q06703 312 aa3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B YOL073CQ08232 322 aa3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B ALR1Q08269 859 aa3.62□□□□□ -1.83
tC(GCA)BtC(GCA)B IES4Q08561 116 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 66.1 ms