RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 YLR415CO13578 112 aa2.79□□□□□ -1.96
snR49snR49 CLN2P20438 545 aa2.79□□□□□ -1.96
snR49snR49 PRI2P20457 528 aa2.79□□□□□ -1.96
snR49snR49 SPO11P23179 398 aa2.79□□□□□ -1.96
snR49snR49 NGG1P32494 702 aa2.79□□□□□ -1.96
snR49snR49 HBS1P32769 611 aaKnown RBP2.79□□□□□ -1.96
snR49snR49 REC104P33323 182 aa2.79□□□□□ -1.96
snR49snR49 PZF1P39933 429 aa2.79□□□□□ -1.96
snR49snR49 PUS2P53167 370 aa2.79□□□□□ -1.96
snR49snR49 LCD1Q04377 747 aa2.79□□□□□ -1.96
snR49snR49 HAL9Q12180 1030 aa2.79□□□□□ -1.96
snR49snR49 MRP8P35719 219 aa2.78□□□□□ -1.96
snR49snR49 PBY1P38254 753 aa2.78□□□□□ -1.96
snR49snR49 SAK1P38990 1142 aa2.78□□□□□ -1.96
snR49snR49 HSV2P50079 448 aaPredicted RBP2.78□□□□□ -1.96
snR49snR49 UBC11P52492 156 aa2.78□□□□□ -1.96
snR49snR49 CWC24P53769 259 aa2.78□□□□□ -1.96
snR49snR49 TGL5Q12043 749 aa2.78□□□□□ -1.96
snR49snR49 CYS3P31373 394 aaKnown RBP2.77□□□□□ -1.97
snR49snR49 HIR1P32479 840 aa2.77□□□□□ -1.97
snR49snR49 ORC2P32833 620 aa2.77□□□□□ -1.97
snR49snR49 UBS1P38290 277 aa2.77□□□□□ -1.97
snR49snR49 YEL020CP39994 560 aa2.77□□□□□ -1.97
snR49snR49 PFA3P42836 336 aa2.77□□□□□ -1.97
snR49snR49 GAT1P43574 510 aa2.77□□□□□ -1.97
snR49snR49 YML020WQ03722 664 aa2.77□□□□□ -1.97
snR49snR49 YPR071WQ12346 211 aa2.77□□□□□ -1.97
snR49snR49 STE5P32917 917 aa2.76□□□□□ -1.97
snR49snR49 IRR1P40541 1150 aa2.76□□□□□ -1.97
snR49snR49 SSY5P47002 699 aa2.76□□□□□ -1.97
snR49snR49 JSN1P47135 1091 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
snR49snR49 TPO2P53283 614 aa2.76□□□□□ -1.97
snR49snR49 NOP8Q08287 484 aaPredicted RBP2.76□□□□□ -1.97
snR49snR49 PIN2Q12057 282 aa2.76□□□□□ -1.97
snR49snR49 YOR022CQ12204 715 aa2.76□□□□□ -1.97
snR49snR49 NDC80P40460 691 aa2.75□□□□□ -1.97
snR49snR49 BAP3P41815 604 aa2.75□□□□□ -1.97
snR49snR49 SCS3P53012 380 aa2.75□□□□□ -1.97
snR49snR49 ENV7Q12003 364 aa2.75□□□□□ -1.97
snR49snR49 GPR1Q12361 961 aa2.75□□□□□ -1.97
snR49snR49 RPN13O13563 156 aa2.74□□□□□ -1.97
snR49snR49 SIR3P06701 978 aa2.74□□□□□ -1.97
snR49snR49 HOM2P13663 365 aaKnown RBP2.74□□□□□ -1.97
snR49snR49 YBR284WP38150 797 aa2.74□□□□□ -1.97
snR49snR49 MAD1P40957 749 aa2.74□□□□□ -1.97
snR49snR49 YAP1802P53309 568 aa2.74□□□□□ -1.97
snR49snR49 NOG2P53742 486 aaKnown RBP2.74□□□□□ -1.97
snR49snR49 RIM13Q03792 727 aa2.74□□□□□ -1.97
snR49snR49 ATG11Q12527 1178 aa2.74□□□□□ -1.97
snR49snR49 VPS34P22543 875 aa2.73□□□□□ -1.97
snR49snR49 YCL002CP25565 263 aa2.73□□□□□ -1.97
snR49snR49 SIC1P38634 284 aa2.73□□□□□ -1.97
snR49snR49 PAC2P39937 518 aa2.73□□□□□ -1.97
snR49snR49 OSW1Q08692 278 aa2.73□□□□□ -1.97
snR49snR49 DAL7P21826 554 aa2.72□□□□□ -1.97
snR49snR49 YUR1P26725 428 aa2.72□□□□□ -1.97
snR49snR49 GLG1P36143 616 aa2.72□□□□□ -1.97
snR49snR49 REV7P38927 245 aa2.72□□□□□ -1.97
snR49snR49 PFD1P46988 109 aa2.72□□□□□ -1.97
snR49snR49 BNA3P47039 444 aaKnown RBP2.72□□□□□ -1.97
snR49snR49 TEX1P53851 422 aaKnown RBP2.72□□□□□ -1.97
snR49snR49 SEG1Q04279 960 aa2.72□□□□□ -1.97
snR49snR49 RSC3Q06639 885 aa2.72□□□□□ -1.97
snR49snR49 PRC1P00729 532 aa2.71□□□□□ -1.98
snR49snR49 PYC1P11154 1178 aaKnown RBP2.71□□□□□ -1.98
snR49snR49 TOP3P13099 656 aa2.71□□□□□ -1.98
snR49snR49 PRP9P19736 530 aaKnown RBP2.71□□□□□ -1.98
snR49snR49 PET10P36139 283 aa2.71□□□□□ -1.98
snR49snR49 YBR184WP38299 523 aa2.71□□□□□ -1.98
snR49snR49 YBR259WP38338 688 aa2.71□□□□□ -1.98
snR49snR49 BDH2P39713 417 aa2.71□□□□□ -1.98
snR49snR49 ARG2P40360 574 aa2.71□□□□□ -1.98
snR49snR49 CTR1P49573 406 aa2.71□□□□□ -1.98
snR49snR49 LRS4Q04087 347 aaKnown RBP2.71□□□□□ -1.98
snR49snR49 THI21Q08975 551 aa2.71□□□□□ -1.98
snR49snR49 YKL033W-AQ86ZR7 236 aa2.71□□□□□ -1.98
snR49snR49 MSD1P15179 658 aaKnown RBP2.7□□□□□ -1.98
snR49snR49 CDC11P32458 415 aa2.7□□□□□ -1.98
snR49snR49 CCT3P39077 534 aaKnown RBP2.7□□□□□ -1.98
snR49snR49 SPF1P39986 1215 aaKnown RBP2.7□□□□□ -1.98
snR49snR49 ALR2P43553 858 aa2.7□□□□□ -1.98
snR49snR49 PAN2P53010 1115 aaPredicted RBP2.7□□□□□ -1.98
snR49snR49 TAD1P53065 400 aa2.7□□□□□ -1.98
snR49snR49 PTP1P25044 335 aa2.69□□□□□ -1.98
snR49snR49 SFB3P38810 929 aa2.69□□□□□ -1.98
snR49snR49 BPL1P48445 690 aaPredicted RBP2.69□□□□□ -1.98
snR49snR49 NIT3P49954 291 aa2.69□□□□□ -1.98
snR49snR49 UBC9P50623 157 aaPredicted RBP2.69□□□□□ -1.98
snR49snR49 RGT2Q12300 763 aa2.69□□□□□ -1.98
snR49snR49 HBN1Q96VH4 193 aa2.69□□□□□ -1.98
snR49snR49 PHR1P05066 565 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
snR49snR49 HRB1P38922 454 aaKnown RBP RIP-Chip data2.68□□□□□ -1.98not detected
snR49snR49 NET1P47035 1189 aa2.68□□□□□ -1.98
snR49snR49 MRK1P50873 501 aa2.68□□□□□ -1.98
snR49snR49 MTL1P53214 551 aa2.68□□□□□ -1.98
snR49snR49 UTP8P53276 713 aaKnown RBP2.68□□□□□ -1.98
snR49snR49 FHN1P53279 174 aa2.68□□□□□ -1.98
snR49snR49 ATG4P53867 494 aa2.68□□□□□ -1.98
snR49snR49 GAD1Q04792 585 aa2.68□□□□□ -1.98
snR49snR49 TDA5Q06417 326 aaKnown RBP2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 74.6 ms