RNA–Protein interactions for RNA: snR46

snR46, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR46, Length 197 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR46	snR46	MPS1	P54199	764 aa		2.25	□□□□□ -2.05
snR46	snR46	SMX3	P54999	86 aa	Predicted RBP	2.25	□□□□□ -2.05
snR46	snR46	SLK19	Q08581	821 aa	Known RBP	2.25	□□□□□ -2.05
snR46	snR46	RGT2	Q12300	763 aa		2.25	□□□□□ -2.05
snR46	snR46	AGP1	P25376	633 aa		2.24	□□□□□ -2.05
snR46	snR46	URA1	P28272	314 aa	Predicted RBP	2.24	□□□□□ -2.05
snR46	snR46	BCD1	P38772	366 aa		2.24	□□□□□ -2.05
snR46	snR46	GGA2	P38817	585 aa	Known RBP	2.24	□□□□□ -2.05
snR46	snR46	SAK1	P38990	1142 aa		2.24	□□□□□ -2.05
snR46	snR46	XBP1	P40489	647 aa		2.24	□□□□□ -2.05
snR46	snR46	FAA4	P47912	694 aa	Known RBP	2.24	□□□□□ -2.05
snR46	snR46	YAP1802	P53309	568 aa		2.24	□□□□□ -2.05
snR46	snR46	MUS81	Q04149	632 aa	Predicted RBP	2.24	□□□□□ -2.05
snR46	snR46	TAF3	Q12297	353 aa		2.24	□□□□□ -2.05
snR46	snR46	ERG11	P10614	530 aa		2.23	□□□□□ -2.05
snR46	snR46	CYS3	P31373	394 aa	Known RBP	2.23	□□□□□ -2.05
snR46	snR46	VBA5	P36172	582 aa		2.23	□□□□□ -2.05
snR46	snR46	CCT7	P42943	550 aa	Known RBP	2.23	□□□□□ -2.05
snR46	snR46	BNA3	P47039	444 aa	Known RBP	2.23	□□□□□ -2.05
snR46	snR46	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.23	□□□□□ -2.05	not detected
snR46	snR46	UBC9	P50623	157 aa	Predicted RBP	2.23	□□□□□ -2.05
snR46	snR46	CWC24	P53769	259 aa		2.23	□□□□□ -2.05
snR46	snR46	VPS16	Q03308	798 aa		2.23	□□□□□ -2.05
snR46	snR46	ASM4	Q05166	528 aa		2.23	□□□□□ -2.05
snR46	snR46	YLR415C	O13578	112 aa		2.22	□□□□□ -2.05
snR46	snR46	NUP1	P20676	1076 aa		2.22	□□□□□ -2.05
snR46	snR46	RGT1	P32862	1170 aa		2.22	□□□□□ -2.05
snR46	snR46	REC104	P33323	182 aa		2.22	□□□□□ -2.05
snR46	snR46	SSY5	P47002	699 aa		2.22	□□□□□ -2.05
snR46	snR46	BPL1	P48445	690 aa	Predicted RBP	2.22	□□□□□ -2.05
snR46	snR46	UBC11	P52492	156 aa		2.22	□□□□□ -2.05
snR46	snR46	DUS1	P53759	423 aa	Known RBP	2.22	□□□□□ -2.05
snR46	snR46	YLR149C	Q99296	730 aa		2.22	□□□□□ -2.05
snR46	snR46	AFR1	P33304	620 aa		2.21	□□□□□ -2.06
snR46	snR46	PAC2	P39937	518 aa		2.21	□□□□□ -2.06
snR46	snR46	ARG2	P40360	574 aa		2.21	□□□□□ -2.06
snR46	snR46	TGL5	Q12043	749 aa		2.21	□□□□□ -2.06
snR46	snR46	HAL9	Q12180	1030 aa		2.21	□□□□□ -2.06
snR46	snR46	RPA135	P22138	1203 aa	Known RBP	2.2	□□□□□ -2.06
snR46	snR46	CCR4	P31384	837 aa	Known RBP	2.2	□□□□□ -2.06
snR46	snR46	HIR1	P32479	840 aa		2.2	□□□□□ -2.06
snR46	snR46	ERT1	P38140	529 aa		2.2	□□□□□ -2.06
snR46	snR46	RSP5	P39940	809 aa	Known RBP	2.2	□□□□□ -2.06
snR46	snR46	TOK1	P40310	691 aa		2.2	□□□□□ -2.06
snR46	snR46	LTP1	P40347	161 aa		2.2	□□□□□ -2.06
snR46	snR46	HOS4	P40480	1083 aa		2.2	□□□□□ -2.06
snR46	snR46	LCD1	Q04377	747 aa		2.2	□□□□□ -2.06
snR46	snR46	RSC3	Q06639	885 aa		2.2	□□□□□ -2.06
snR46	snR46	OSW1	Q08692	278 aa		2.2	□□□□□ -2.06
snR46	snR46	YOR022C	Q12204	715 aa		2.2	□□□□□ -2.06
snR46	snR46	PRC1	P00729	532 aa		2.19	□□□□□ -2.06
snR46	snR46	SAP190	P36123	1033 aa		2.19	□□□□□ -2.06
snR46	snR46	BDH2	P39713	417 aa		2.19	□□□□□ -2.06
snR46	snR46	SIT1	P39980	628 aa		2.19	□□□□□ -2.06
snR46	snR46	PFA3	P42836	336 aa		2.19	□□□□□ -2.06
snR46	snR46	TDA9	Q04545	1251 aa		2.19	□□□□□ -2.06
snR46	snR46	RRP15	Q06511	250 aa	Predicted RBP	2.19	□□□□□ -2.06
snR46	snR46	YPR071W	Q12346	211 aa		2.19	□□□□□ -2.06
snR46	snR46	ATG11	Q12527	1178 aa		2.19	□□□□□ -2.06
snR46	snR46	YKL033W-A	Q86ZR7	236 aa		2.19	□□□□□ -2.06
snR46	snR46	PRI2	P20457	528 aa		2.18	□□□□□ -2.06
snR46	snR46	HEM3	P28789	327 aa		2.18	□□□□□ -2.06
snR46	snR46	SFB3	P38810	929 aa		2.18	□□□□□ -2.06
snR46	snR46	MEP2	P41948	499 aa		2.18	□□□□□ -2.06
snR46	snR46	NOG2	P53742	486 aa	Known RBP	2.18	□□□□□ -2.06
snR46	snR46	FMP30	Q02883	468 aa		2.18	□□□□□ -2.06
snR46	snR46	SHE9	Q04172	456 aa		2.18	□□□□□ -2.06
snR46	snR46	GAD1	Q04792	585 aa		2.18	□□□□□ -2.06
snR46	snR46	PGK1	P00560	416 aa	Known RBP	2.17	□□□□□ -2.06
snR46	snR46	PYC1	P11154	1178 aa	Known RBP	2.17	□□□□□ -2.06
snR46	snR46	MVD1	P32377	396 aa	Known RBP	2.17	□□□□□ -2.06
snR46	snR46	MRP8	P35719	219 aa		2.17	□□□□□ -2.06
snR46	snR46	PBY1	P38254	753 aa		2.17	□□□□□ -2.06
snR46	snR46	YBR259W	P38338	688 aa		2.17	□□□□□ -2.06
snR46	snR46	MTR3	P48240	250 aa	Predicted RBP	2.17	□□□□□ -2.06
snR46	snR46	NIT3	P49954	291 aa		2.17	□□□□□ -2.06
snR46	snR46	TOP3	P13099	656 aa		2.16	□□□□□ -2.06
snR46	snR46	NOP1	P15646	327 aa	Known RBP	2.16	□□□□□ -2.06
snR46	snR46	DAL7	P21826	554 aa		2.16	□□□□□ -2.06
snR46	snR46	ASF1	P32447	279 aa		2.16	□□□□□ -2.06
snR46	snR46	CDC11	P32458	415 aa		2.16	□□□□□ -2.06
snR46	snR46	SCT1	P32784	759 aa		2.16	□□□□□ -2.06
snR46	snR46	CCT3	P39077	534 aa	Known RBP	2.16	□□□□□ -2.06
snR46	snR46	MAD1	P40957	749 aa		2.16	□□□□□ -2.06
snR46	snR46	MRK1	P50873	501 aa		2.16	□□□□□ -2.06
snR46	snR46	PAN2	P53010	1115 aa	Predicted RBP	2.16	□□□□□ -2.06
snR46	snR46	ATG4	P53867	494 aa		2.16	□□□□□ -2.06
snR46	snR46	OPI10	Q08202	246 aa		2.16	□□□□□ -2.06
snR46	snR46	YBR284W	P38150	797 aa		2.15	□□□□□ -2.07
snR46	snR46	YBP2	P53169	641 aa		2.15	□□□□□ -2.07
snR46	snR46	TEX1	P53851	422 aa	Known RBP	2.15	□□□□□ -2.07
snR46	snR46	CTK1	Q03957	528 aa	Known RBP	2.15	□□□□□ -2.07
snR46	snR46	SIR3	P06701	978 aa		2.14	□□□□□ -2.07
snR46	snR46	PRP9	P19736	530 aa	Known RBP	2.14	□□□□□ -2.07
snR46	snR46	APN1	P22936	367 aa		2.14	□□□□□ -2.07
snR46	snR46	UBS1	P38290	277 aa		2.14	□□□□□ -2.07
snR46	snR46	MUP3	P38734	546 aa		2.14	□□□□□ -2.07
snR46	snR46	IRR1	P40541	1150 aa		2.14	□□□□□ -2.07
snR46	snR46	BAP3	P41815	604 aa		2.14	□□□□□ -2.07
snR46	snR46	BUL2	Q03758	920 aa	Known RBP	2.14	□□□□□ -2.07

Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms