RNA–Protein interactions for RNA: snR19

snR19, Transcript of U1 spliceosomal RNA (U1 snRNA), yeast

Gene snR19, Length 568 nt, Biotype snRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR19	snR19	TSL1	P38427	1098 aa	Known RBP	5.9	□□□□□ -1.46
snR19	snR19	YAP1801	P38856	637 aa		5.9	□□□□□ -1.46
snR19	snR19	ECL1	P48235	211 aa		5.9	□□□□□ -1.46
snR19	snR19	DUS1	P53759	423 aa	Known RBP	5.9	□□□□□ -1.46
snR19	snR19	MSC2	Q03455	724 aa		5.9	□□□□□ -1.46
snR19	snR19	SIZ1	Q04195	904 aa		5.9	□□□□□ -1.46
snR19	snR19	CYC1	P00044	109 aa	Predicted RBP	5.89	□□□□□ -1.47
snR19	snR19	MSD1	P15179	658 aa	Known RBP	5.89	□□□□□ -1.47
snR19	snR19	TIM23	P32897	222 aa		5.89	□□□□□ -1.47
snR19	snR19	NUP82	P40368	713 aa		5.89	□□□□□ -1.47
snR19	snR19	MHP1	P43638	1398 aa		5.89	□□□□□ -1.47
snR19	snR19	CTT1	P06115	562 aa		5.88	□□□□□ -1.47
snR19	snR19	CMP2	P14747	604 aa		5.88	□□□□□ -1.47
snR19	snR19	SRM1	P21827	482 aa		5.88	□□□□□ -1.47
snR19	snR19	ERT1	P38140	529 aa		5.88	□□□□□ -1.47
snR19	snR19	YER158C	P40095	573 aa		5.88	□□□□□ -1.47
snR19	snR19	TOK1	P40310	691 aa		5.88	□□□□□ -1.47
snR19	snR19	SNO2	P53823	222 aa		5.88	□□□□□ -1.47
snR19	snR19	SFB2	P53953	876 aa		5.88	□□□□□ -1.47
snR19	snR19	RIX7	Q07844	837 aa	Known RBP	5.88	□□□□□ -1.47
snR19	snR19	BUG1	Q12191	341 aa		5.88	□□□□□ -1.47
snR19	snR19	YLR419W	Q06698	1435 aa	Known RBP	5.88	□□□□□ -1.47
snR19	snR19	ERR1	P0CX10	437 aa		5.87	□□□□□ -1.47
snR19	snR19	ERR2	P0CX11	437 aa		5.87	□□□□□ -1.47
snR19	snR19	CDC48	P25694	835 aa	Known RBP	5.87	□□□□□ -1.47
snR19	snR19	DOM34	P33309	386 aa		5.87	□□□□□ -1.47
snR19	snR19	ECM21	P38167	1117 aa	Known RBP	5.87	□□□□□ -1.47
snR19	snR19	YBR238C	P38330	731 aa	Known RBP	5.87	□□□□□ -1.47
snR19	snR19	UBP6	P43593	499 aa	Known RBP	5.87	□□□□□ -1.47
snR19	snR19	CCM1	P48237	864 aa	Predicted RBP	5.87	□□□□□ -1.47
snR19	snR19	ADE16	P54113	591 aa	Known RBP	5.87	□□□□□ -1.47
snR19	snR19	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
snR19	snR19	YLR278C	Q05854	1341 aa		5.87	□□□□□ -1.47
snR19	snR19	GAL10	P04397	699 aa		5.86	□□□□□ -1.47
snR19	snR19	TOM70	P07213	617 aa	Known RBP	5.86	□□□□□ -1.47
snR19	snR19	RPC82	P32349	654 aa		5.86	□□□□□ -1.47
snR19	snR19	REC104	P33323	182 aa		5.86	□□□□□ -1.47
snR19	snR19	SEG2	P34250	1132 aa		5.86	□□□□□ -1.47
snR19	snR19	MNN4	P36044	1178 aa		5.86	□□□□□ -1.47
snR19	snR19	YKE2	P52553	114 aa		5.86	□□□□□ -1.47
snR19	snR19	MRPL22	P53881	309 aa		5.86	□□□□□ -1.47
snR19	snR19	SGD1	Q06132	899 aa		5.86	□□□□□ -1.47
snR19	snR19	YPR196W	Q06595	470 aa		5.86	□□□□□ -1.47
snR19	snR19	QCR6	P00127	147 aa		5.85	□□□□□ -1.47
snR19	snR19	PHO8	P11491	566 aa		5.85	□□□□□ -1.47
snR19	snR19	RNH70	P53331	553 aa		5.85	□□□□□ -1.47
snR19	snR19	YLR125W	Q12138	136 aa		5.85	□□□□□ -1.47
snR19	snR19	CWC22	P53333	577 aa	Known RBP	5.84	□□□□□ -1.47
snR19	snR19	PLB2	Q03674	706 aa		5.84	□□□□□ -1.47
snR19	snR19	YOR352W	Q08816	343 aa		5.84	□□□□□ -1.47
snR19	snR19	RPO41	P13433	1351 aa	Known RBP	5.83	□□□□□ -1.48
snR19	snR19	TOP1	P04786	769 aa		5.83	□□□□□ -1.48
snR19	snR19	TSA1	P34760	196 aa	Known RBP	5.83	□□□□□ -1.48
snR19	snR19	NMD2	P38798	1089 aa	Known RBP	5.83	□□□□□ -1.48
snR19	snR19	LAM1	P38851	1228 aa		5.83	□□□□□ -1.48
snR19	snR19	ZRG8	P40021	1076 aa		5.83	□□□□□ -1.48
snR19	snR19	ROT1	Q03691	256 aa		5.83	□□□□□ -1.48
snR19	snR19	AIM44	Q99299	758 aa		5.83	□□□□□ -1.48
snR19	snR19	GAS1	P22146	559 aa	Known RBP	5.82	□□□□□ -1.48
snR19	snR19	PPG1	P32838	368 aa		5.82	□□□□□ -1.48
snR19	snR19	SRP101	P32916	621 aa		5.82	□□□□□ -1.48
snR19	snR19	RRP14	P36080	434 aa	Known RBP	5.82	□□□□□ -1.48
snR19	snR19	ESL2	P36168	1195 aa		5.82	□□□□□ -1.48
snR19	snR19	MND2	P40577	368 aa		5.82	□□□□□ -1.48
snR19	snR19	PRP43	P53131	767 aa	Known RBP	5.82	□□□□□ -1.48
snR19	snR19	YGR012W	P53206	393 aa		5.82	□□□□□ -1.48
snR19	snR19	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.82	□□□□□ -1.48	not detected
snR19	snR19	ALG12	P53730	551 aa		5.82	□□□□□ -1.48
snR19	snR19	CDA1	Q06702	301 aa		5.82	□□□□□ -1.48
snR19	snR19	HSF1	P10961	833 aa		5.81	□□□□□ -1.48
snR19	snR19	ENA1	P13587	1091 aa		5.81	□□□□□ -1.48
snR19	snR19	YKL222C	P35995	705 aa		5.81	□□□□□ -1.48
snR19	snR19	MEF2	P39677	819 aa		5.81	□□□□□ -1.48
snR19	snR19	GDH3	P39708	457 aa		5.81	□□□□□ -1.48
snR19	snR19	ALG2	P43636	503 aa		5.81	□□□□□ -1.48
snR19	snR19	HSV2	P50079	448 aa	Predicted RBP	5.81	□□□□□ -1.48
snR19	snR19	ENA2	Q01896	1091 aa		5.81	□□□□□ -1.48
snR19	snR19	CDA2	Q06703	312 aa		5.81	□□□□□ -1.48
snR19	snR19	ENV7	Q12003	364 aa		5.81	□□□□□ -1.48
snR19	snR19	ENA5	Q12691	1091 aa		5.81	□□□□□ -1.48
snR19	snR19	LEU2	P04173	364 aa	Predicted RBP	5.8	□□□□□ -1.48
snR19	snR19	THI4	P32318	326 aa		5.8	□□□□□ -1.48
snR19	snR19	NUG1	P40010	520 aa	Known RBP	5.8	□□□□□ -1.48
snR19	snR19	MAL11	P53048	616 aa		5.8	□□□□□ -1.48
snR19	snR19	PBP1	P53297	722 aa	Known RBP	5.8	□□□□□ -1.48
snR19	snR19	MET6	P05694	767 aa	Known RBP	5.79	□□□□□ -1.48
snR19	snR19	NOT3	P06102	836 aa	Known RBP	5.79	□□□□□ -1.48
snR19	snR19	CLC1	P17891	233 aa		5.79	□□□□□ -1.48
snR19	snR19	DEF1	P35732	738 aa	Known RBP	5.79	□□□□□ -1.48
snR19	snR19	NIT1	P40447	199 aa		5.79	□□□□□ -1.48
snR19	snR19	GYP8	P43570	497 aa		5.79	□□□□□ -1.48
snR19	snR19	AVT1	P47082	602 aa		5.79	□□□□□ -1.48
snR19	snR19	RAI1	P53063	387 aa	Known RBP	5.79	□□□□□ -1.48
snR19	snR19	GTF1	P53260	183 aa	Predicted RBP	5.79	□□□□□ -1.48
snR19	snR19	YGR283C	P53336	341 aa	Predicted RBP	5.79	□□□□□ -1.48
snR19	snR19	GCN5	Q03330	439 aa		5.79	□□□□□ -1.48
snR19	snR19	YDR132C	Q03900	495 aa		5.79	□□□□□ -1.48
snR19	snR19	DUS4	Q06063	367 aa		5.79	□□□□□ -1.48
snR19	snR19	CTI6	Q08923	506 aa		5.79	□□□□□ -1.48
snR19	snR19	POM152	P39685	1337 aa		5.78	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms