RNA–Protein interactions for RNA: YPL230W

USV1, Transcript of Putative transcription factor containing a C2H2 zinc finger, yeast

Gene USV1, Length 1,176 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
USV1	YPL230W	TOK1	P40310	691 aa		4.94	□□□□□ -1.62
USV1	YPL230W	ALG2	P43636	503 aa		4.94	□□□□□ -1.62
USV1	YPL230W	LCD1	Q04377	747 aa		4.94	□□□□□ -1.62
USV1	YPL230W	HRQ1	Q05549	1077 aa		4.94	□□□□□ -1.62
USV1	YPL230W	WHI4	Q07655	649 aa	Known RBP	4.94	□□□□□ -1.62
USV1	YPL230W	YLR001C	Q07895	862 aa		4.94	□□□□□ -1.62
USV1	YPL230W	NUP145	P49687	1317 aa		4.94	□□□□□ -1.62
USV1	YPL230W	ADE8	P04161	214 aa		4.93	□□□□□ -1.62
USV1	YPL230W	GSY1	P23337	708 aa		4.93	□□□□□ -1.62
USV1	YPL230W	NPP1	P25353	742 aa		4.93	□□□□□ -1.62
USV1	YPL230W	YKL151C	P36059	337 aa		4.93	□□□□□ -1.62
USV1	YPL230W	SAH1	P39954	449 aa	Known RBP	4.93	□□□□□ -1.62
USV1	YPL230W	YGR237C	P50089	785 aa		4.93	□□□□□ -1.62
USV1	YPL230W	RNT1	Q02555	471 aa		4.93	□□□□□ -1.62
USV1	YPL230W	SRP1	Q02821	542 aa	Known RBP	4.93	□□□□□ -1.62
USV1	YPL230W	IRC10	Q08118	586 aa		4.93	□□□□□ -1.62
USV1	YPL230W	YOL057W	Q08225	711 aa		4.93	□□□□□ -1.62
USV1	YPL230W	GIC1	P38785	314 aa		4.92	□□□□□ -1.62
USV1	YPL230W	PMT3	P47190	753 aa		4.92	□□□□□ -1.62
USV1	YPL230W	FOL1	P53848	824 aa		4.92	□□□□□ -1.62
USV1	YPL230W	UME1	Q03010	460 aa		4.92	□□□□□ -1.62
USV1	YPL230W	THI73	Q07904	523 aa		4.92	□□□□□ -1.62
USV1	YPL230W	CDC9	P04819	755 aa		4.91	□□□□□ -1.62
USV1	YPL230W	TRP4	P07285	380 aa	Predicted RBP	4.91	□□□□□ -1.62
USV1	YPL230W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
USV1	YPL230W	SPC29	P33419	253 aa		4.91	□□□□□ -1.62
USV1	YPL230W	PAF1	P38351	445 aa		4.91	□□□□□ -1.62
USV1	YPL230W	GYP8	P43570	497 aa		4.91	□□□□□ -1.62
USV1	YPL230W	GPG1	P53130	126 aa		4.91	□□□□□ -1.62
USV1	YPL230W	SDA1	P53313	767 aa	Known RBP	4.91	□□□□□ -1.62
USV1	YPL230W	TMA17	Q12513	150 aa		4.91	□□□□□ -1.62
USV1	YPL230W	SRD1	P09007	221 aa		4.9	□□□□□ -1.63
USV1	YPL230W	SED4	P25365	1065 aa		4.9	□□□□□ -1.63
USV1	YPL230W	MRC1	P25588	1096 aa		4.9	□□□□□ -1.63
USV1	YPL230W	SCT1	P32784	759 aa		4.9	□□□□□ -1.63
USV1	YPL230W	REC104	P33323	182 aa		4.9	□□□□□ -1.63
USV1	YPL230W	GRX7	P38068	203 aa		4.9	□□□□□ -1.63
USV1	YPL230W	NUG1	P40010	520 aa	Known RBP	4.9	□□□□□ -1.63
USV1	YPL230W	YJR120W	P47157	116 aa		4.9	□□□□□ -1.63
USV1	YPL230W	RAD18	P10862	487 aa		4.89	□□□□□ -1.63
USV1	YPL230W	TSL1	P38427	1098 aa	Known RBP	4.89	□□□□□ -1.63
USV1	YPL230W	TY4A-J	P47023	414 aa		4.89	□□□□□ -1.63
USV1	YPL230W	RPC82	P32349	654 aa		4.88	□□□□□ -1.63
USV1	YPL230W	ENP1	P38333	483 aa	Known RBP	4.88	□□□□□ -1.63
USV1	YPL230W	NPP2	P39997	493 aa		4.88	□□□□□ -1.63
USV1	YPL230W	MGS1	P40151	587 aa		4.88	□□□□□ -1.63
USV1	YPL230W	CCM1	P48237	864 aa	Predicted RBP	4.88	□□□□□ -1.63
USV1	YPL230W	MET13	P53128	600 aa		4.88	□□□□□ -1.63
USV1	YPL230W	YGR283C	P53336	341 aa	Predicted RBP	4.88	□□□□□ -1.63
USV1	YPL230W	YPR196W	Q06595	470 aa		4.88	□□□□□ -1.63
USV1	YPL230W	FAP7	Q12055	197 aa	Predicted RBP	4.88	□□□□□ -1.63
USV1	YPL230W	UPC2	Q12151	913 aa		4.88	□□□□□ -1.63
USV1	YPL230W	PPR1	P07272	904 aa	Predicted RBP	4.87	□□□□□ -1.63
USV1	YPL230W	PCL2	P25693	308 aa		4.87	□□□□□ -1.63
USV1	YPL230W	MTC2	P34246	357 aa		4.87	□□□□□ -1.63
USV1	YPL230W	MTH1	P35198	433 aa		4.87	□□□□□ -1.63
USV1	YPL230W	EMC3	P36039	253 aa		4.87	□□□□□ -1.63
USV1	YPL230W	TYS1	P36421	394 aa	Known RBP	4.87	□□□□□ -1.63
USV1	YPL230W	YBR238C	P38330	731 aa	Known RBP	4.87	□□□□□ -1.63
USV1	YPL230W	TPM2	P40414	161 aa		4.87	□□□□□ -1.63
USV1	YPL230W	GYP7	P48365	746 aa		4.87	□□□□□ -1.63
USV1	YPL230W	MUK1	Q02866	612 aa		4.87	□□□□□ -1.63
USV1	YPL230W	ENV7	Q12003	364 aa		4.87	□□□□□ -1.63
USV1	YPL230W	ALG7	P07286	448 aa		4.86	□□□□□ -1.63
USV1	YPL230W	YER158C	P40095	573 aa		4.86	□□□□□ -1.63
USV1	YPL230W	GPP1	P41277	250 aa	Known RBP	4.86	□□□□□ -1.63
USV1	YPL230W	PEX8	P53248	589 aa		4.86	□□□□□ -1.63
USV1	YPL230W	GND2	P53319	492 aa		4.86	□□□□□ -1.63
USV1	YPL230W	SFB2	P53953	876 aa		4.86	□□□□□ -1.63
USV1	YPL230W	ATP25	Q03153	612 aa		4.86	□□□□□ -1.63
USV1	YPL230W	RSC3	Q06639	885 aa		4.86	□□□□□ -1.63
USV1	YPL230W	MET7	Q08645	548 aa		4.86	□□□□□ -1.63
USV1	YPL230W	SFL1	P20134	766 aa		4.85	□□□□□ -1.63
USV1	YPL230W	PER1	P25625	357 aa		4.85	□□□□□ -1.63
USV1	YPL230W	STO1	P34160	861 aa	Known RBP	4.85	□□□□□ -1.63
USV1	YPL230W	YKR078W	P36158	585 aa	Known RBP	4.85	□□□□□ -1.63
USV1	YPL230W	RAI1	P53063	387 aa	Known RBP	4.85	□□□□□ -1.63
USV1	YPL230W	DAM1	P53267	343 aa		4.85	□□□□□ -1.63
USV1	YPL230W	MTQ2	Q03920	221 aa	Predicted RBP	4.85	□□□□□ -1.63
USV1	YPL230W	CDC48	P25694	835 aa	Known RBP	4.84	□□□□□ -1.63
USV1	YPL230W	YEL1	P34225	687 aa		4.84	□□□□□ -1.63
USV1	YPL230W	MCD4	P36051	919 aa		4.84	□□□□□ -1.63
USV1	YPL230W	CAF16	P43569	289 aa		4.84	□□□□□ -1.63
USV1	YPL230W	NIT3	P49954	291 aa		4.84	□□□□□ -1.63
USV1	YPL230W	HBT1	Q07653	1046 aa	Known RBP	4.84	□□□□□ -1.63
USV1	YPL230W	EUG1	P32474	517 aa		4.83	□□□□□ -1.64
USV1	YPL230W	SEC6	P32844	805 aa		4.83	□□□□□ -1.64
USV1	YPL230W	NOP2	P40991	618 aa	Known RBP	4.83	□□□□□ -1.64
USV1	YPL230W	YJR096W	P47137	282 aa		4.83	□□□□□ -1.64
USV1	YPL230W	YKE2	P52553	114 aa		4.83	□□□□□ -1.64
USV1	YPL230W	COG6	P53959	839 aa		4.83	□□□□□ -1.64
USV1	YPL230W	HFD1	Q04458	532 aa		4.83	□□□□□ -1.64
USV1	YPL230W	MPH2	P0CD99	609 aa		4.82	□□□□□ -1.64
USV1	YPL230W	PRP19	P32523	503 aa	Known RBP	4.82	□□□□□ -1.64
USV1	YPL230W	YBR071W	P38243	211 aa		4.82	□□□□□ -1.64
USV1	YPL230W	PCM1	P38628	557 aa	Known RBP	4.82	□□□□□ -1.64
USV1	YPL230W	AIM14	P53109	570 aa		4.82	□□□□□ -1.64
USV1	YPL230W	SNP1	Q00916	300 aa	Predicted RBP	4.82	□□□□□ -1.64
USV1	YPL230W	YDR514C	Q04408	483 aa		4.82	□□□□□ -1.64
USV1	YPL230W	NDJ1	Q12366	352 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 211.2 ms