RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W CYS3P31373 394 aaKnown RBP2.3□□□□□ -2.04
SGF11YPL047W CDC11P32458 415 aa2.3□□□□□ -2.04
SGF11YPL047W DUS1P53759 423 aaKnown RBP2.3□□□□□ -2.04
SGF11YPL047W SEC5P89102 971 aa2.3□□□□□ -2.04
SGF11YPL047W BUL2Q03758 920 aaKnown RBP2.3□□□□□ -2.04
SGF11YPL047W THI7Q05998 598 aa2.3□□□□□ -2.04
SGF11YPL047W SGO1Q08490 590 aa2.3□□□□□ -2.04
SGF11YPL047W YPR071WQ12346 211 aa2.3□□□□□ -2.04
SGF11YPL047W LAT1P12695 482 aaKnown RBP2.29□□□□□ -2.04
SGF11YPL047W SAK1P38990 1142 aa2.29□□□□□ -2.04
SGF11YPL047W NIT3P49954 291 aa2.29□□□□□ -2.04
SGF11YPL047W GLO1P50107 326 aa2.29□□□□□ -2.04
SGF11YPL047W NOG2P53742 486 aaKnown RBP2.29□□□□□ -2.04
SGF11YPL047W APM1Q00776 475 aaPredicted RBP2.29□□□□□ -2.04
SGF11YPL047W MUS81Q04149 632 aaPredicted RBP2.29□□□□□ -2.04
SGF11YPL047W JIP5Q06214 492 aaPredicted RBP2.29□□□□□ -2.04
SGF11YPL047W HAL9Q12180 1030 aa2.29□□□□□ -2.04
SGF11YPL047W YLR415CO13578 112 aa2.28□□□□□ -2.04
SGF11YPL047W PRC1P00729 532 aa2.28□□□□□ -2.04
SGF11YPL047W TMT1P32643 299 aa2.28□□□□□ -2.04
SGF11YPL047W HBS1P32769 611 aaKnown RBP2.28□□□□□ -2.04
SGF11YPL047W GGA2P38817 585 aaKnown RBP2.28□□□□□ -2.04
SGF11YPL047W YJL206CP39529 758 aa2.28□□□□□ -2.04
SGF11YPL047W FMP52P40008 231 aa2.28□□□□□ -2.04
SGF11YPL047W SSY5P47002 699 aa2.28□□□□□ -2.04
SGF11YPL047W TEL2P53038 688 aa2.28□□□□□ -2.04
SGF11YPL047W RSC3Q06639 885 aa2.28□□□□□ -2.04
SGF11YPL047W YOR022CQ12204 715 aa2.28□□□□□ -2.04
SGF11YPL047W RPN13O13563 156 aa2.27□□□□□ -2.05
SGF11YPL047W SAP190P36123 1033 aa2.27□□□□□ -2.05
SGF11YPL047W YBR284WP38150 797 aa2.27□□□□□ -2.05
SGF11YPL047W BCD1P38772 366 aa2.27□□□□□ -2.05
SGF11YPL047W REV7P38927 245 aa2.27□□□□□ -2.05
SGF11YPL047W PFA3P42836 336 aa2.27□□□□□ -2.05
SGF11YPL047W ALR2P43553 858 aa2.27□□□□□ -2.05
SGF11YPL047W YAP1802P53309 568 aa2.27□□□□□ -2.05
SGF11YPL047W SVF1Q05515 481 aa2.27□□□□□ -2.05
SGF11YPL047W DAL7P21826 554 aa2.26□□□□□ -2.05
SGF11YPL047W ORC2P32833 620 aa2.26□□□□□ -2.05
SGF11YPL047W STE5P32917 917 aa2.26□□□□□ -2.05
SGF11YPL047W YBR184WP38299 523 aa2.26□□□□□ -2.05
SGF11YPL047W UBC11P52492 156 aa2.26□□□□□ -2.05
SGF11YPL047W SMX3P54999 86 aaPredicted RBP2.26□□□□□ -2.05
SGF11YPL047W ASM4Q05166 528 aa2.26□□□□□ -2.05
SGF11YPL047W TDA5Q06417 326 aaKnown RBP2.26□□□□□ -2.05
SGF11YPL047W ENV7Q12003 364 aa2.26□□□□□ -2.05
SGF11YPL047W TGL5Q12043 749 aa2.26□□□□□ -2.05
SGF11YPL047W ATG11Q12527 1178 aa2.26□□□□□ -2.05
SGF11YPL047W TOP3P13099 656 aa2.25□□□□□ -2.05
SGF11YPL047W PET10P36139 283 aa2.25□□□□□ -2.05
SGF11YPL047W YBR259WP38338 688 aa2.25□□□□□ -2.05
SGF11YPL047W VAC8P39968 578 aa2.25□□□□□ -2.05
SGF11YPL047W SPF1P39986 1215 aaKnown RBP2.25□□□□□ -2.05
SGF11YPL047W YEL020CP39994 560 aa2.25□□□□□ -2.05
SGF11YPL047W NDC80P40460 691 aa2.25□□□□□ -2.05
SGF11YPL047W HOS4P40480 1083 aa2.25□□□□□ -2.05
SGF11YPL047W MRI1Q06489 411 aaKnown RBP2.25□□□□□ -2.05
SGF11YPL047W TAF3Q12297 353 aa2.25□□□□□ -2.05
SGF11YPL047W MSD1P15179 658 aaKnown RBP2.24□□□□□ -2.05
SGF11YPL047W HIR1P32479 840 aa2.24□□□□□ -2.05
SGF11YPL047W GLG1P36143 616 aa2.24□□□□□ -2.05
SGF11YPL047W PFD1P46988 109 aa2.24□□□□□ -2.05
SGF11YPL047W MTR3P48240 250 aaPredicted RBP2.24□□□□□ -2.05
SGF11YPL047W CTR1P49573 406 aa2.24□□□□□ -2.05
SGF11YPL047W TAD1P53065 400 aa2.24□□□□□ -2.05
SGF11YPL047W GAD1Q04792 585 aa2.24□□□□□ -2.05
SGF11YPL047W EAF1Q06337 982 aa2.24□□□□□ -2.05
SGF11YPL047W SPO75Q07798 868 aa2.24□□□□□ -2.05
SGF11YPL047W YKL033W-AQ86ZR7 236 aa2.24□□□□□ -2.05
SGF11YPL047W HOM2P13663 365 aaKnown RBP2.23□□□□□ -2.05
SGF11YPL047W YCL002CP25565 263 aa2.23□□□□□ -2.05
SGF11YPL047W EMP70P32802 667 aa2.23□□□□□ -2.05
SGF11YPL047W SPC29P33419 253 aa2.23□□□□□ -2.05
SGF11YPL047W SIC1P38634 284 aa2.23□□□□□ -2.05
SGF11YPL047W SET5P38890 526 aaKnown RBP2.23□□□□□ -2.05
SGF11YPL047W ARG2P40360 574 aa2.23□□□□□ -2.05
SGF11YPL047W SHR5P41912 237 aa2.23□□□□□ -2.05
SGF11YPL047W CCT7P42943 550 aaKnown RBP2.23□□□□□ -2.05
SGF11YPL047W YBP2P53169 641 aa2.23□□□□□ -2.05
SGF11YPL047W UTP8P53276 713 aaKnown RBP2.23□□□□□ -2.05
SGF11YPL047W LRS4Q04087 347 aaKnown RBP2.23□□□□□ -2.05
SGF11YPL047W UBX5Q06682 500 aa2.23□□□□□ -2.05
SGF11YPL047W FMP25Q08023 583 aa2.23□□□□□ -2.05
SGF11YPL047W HBN1Q96VH4 193 aa2.23□□□□□ -2.05
SGF11YPL047W PYC1P11154 1178 aaKnown RBP2.22□□□□□ -2.05
SGF11YPL047W VPS34P22543 875 aa2.22□□□□□ -2.05
SGF11YPL047W ARE1P25628 610 aa2.22□□□□□ -2.05
SGF11YPL047W CCT3P39077 534 aaKnown RBP2.22□□□□□ -2.05
SGF11YPL047W BDH2P39713 417 aa2.22□□□□□ -2.05
SGF11YPL047W BAP3P41815 604 aa2.22□□□□□ -2.05
SGF11YPL047W GAT1P43574 510 aa2.22□□□□□ -2.05
SGF11YPL047W ERP6P53198 216 aa2.22□□□□□ -2.05
SGF11YPL047W ALD6P54115 500 aaKnown RBP2.22□□□□□ -2.05
SGF11YPL047W REH1Q06709 432 aa2.22□□□□□ -2.05
SGF11YPL047W THI21Q08975 551 aa2.22□□□□□ -2.05
SGF11YPL047W PTP1P25044 335 aa2.21□□□□□ -2.06
SGF11YPL047W CCR4P31384 837 aaKnown RBP2.21□□□□□ -2.06
SGF11YPL047W MVD1P32377 396 aaKnown RBP2.21□□□□□ -2.06
SGF11YPL047W EMC3P36039 253 aa2.21□□□□□ -2.06
SGF11YPL047W SFB3P38810 929 aa2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms