RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C ERG7P38604 731 aa10.25□□□□□ -0.77
SSN3YPL042C TFG2P41896 400 aaPredicted RBP10.25□□□□□ -0.77
SSN3YPL042C SHE10P53075 577 aa10.25□□□□□ -0.77
SSN3YPL042C GFD1Q04839 188 aaKnown RBP10.25□□□□□ -0.77
SSN3YPL042C HCR1Q05775 265 aaKnown RBP10.25□□□□□ -0.77
SSN3YPL042C TIF1P10081 395 aaKnown RBP10.24□□□□□ -0.77
SSN3YPL042C MIP1P15801 1254 aa10.24□□□□□ -0.77
SSN3YPL042C VMA2P16140 517 aaKnown RBP10.24□□□□□ -0.77
SSN3YPL042C PSY4P38193 441 aa10.24□□□□□ -0.77
SSN3YPL042C RPL34BP40525 121 aaKnown RBP10.24□□□□□ -0.77
SSN3YPL042C FUS2Q05670 677 aa10.24□□□□□ -0.77
SSN3YPL042C DUS3Q06053 668 aaKnown RBP10.24□□□□□ -0.77
SSN3YPL042C PRT1P06103 763 aaKnown RBP10.23□□□□□ -0.77
SSN3YPL042C STE11P23561 717 aa10.23□□□□□ -0.77
SSN3YPL042C SPT5P27692 1063 aaKnown RBP10.23□□□□□ -0.77
SSN3YPL042C RME1P32338 300 aaKnown RBP10.23□□□□□ -0.77
SSN3YPL042C UTR4P32626 227 aa10.23□□□□□ -0.77
SSN3YPL042C SHP1P34223 423 aa10.23□□□□□ -0.77
SSN3YPL042C MCR1P36060 302 aaKnown RBP10.23□□□□□ -0.77
SSN3YPL042C BSD2P38356 321 aa10.23□□□□□ -0.77
SSN3YPL042C YLF2P38746 405 aa10.23□□□□□ -0.77
SSN3YPL042C BCD1P38772 366 aa10.23□□□□□ -0.77
SSN3YPL042C PEX18P38855 283 aa10.23□□□□□ -0.77
SSN3YPL042C GPB2P39717 880 aa10.23□□□□□ -0.77
SSN3YPL042C SAP185P40856 1058 aa10.23□□□□□ -0.77
SSN3YPL042C MSH6Q03834 1242 aa10.23□□□□□ -0.77
SSN3YPL042C HVG1P0CE11 249 aa10.22□□□□□ -0.77
SSN3YPL042C KIP2P28743 706 aa10.22□□□□□ -0.77
SSN3YPL042C PGM1P33401 570 aaKnown RBP10.22□□□□□ -0.77
SSN3YPL042C YKL100CP34248 587 aa10.22□□□□□ -0.77
SSN3YPL042C BRE2P43132 505 aa10.22□□□□□ -0.77
SSN3YPL042C NUP42P49686 430 aaKnown RBP10.22□□□□□ -0.77
SSN3YPL042C YGR237CP50089 785 aa10.22□□□□□ -0.77
SSN3YPL042C PTA1Q01329 785 aaPredicted RBP10.22□□□□□ -0.77
SSN3YPL042C ORM2Q06144 216 aa10.22□□□□□ -0.77
SSN3YPL042C MDM36Q06820 579 aa10.22□□□□□ -0.77
SSN3YPL042C TMA16Q08687 178 aa10.22□□□□□ -0.77
SSN3YPL042C PGC1Q08959 321 aa10.22□□□□□ -0.77
SSN3YPL042C GAL1P04385 528 aa10.22□□□□□ -0.77
SSN3YPL042C DIT1P21623 536 aa10.22□□□□□ -0.77
SSN3YPL042C DAL80P26343 269 aa10.22□□□□□ -0.77
SSN3YPL042C OXP1P28273 1286 aa10.22□□□□□ -0.77
SSN3YPL042C NUP82P40368 713 aa10.22□□□□□ -0.77
SSN3YPL042C LSC2P53312 427 aa10.22□□□□□ -0.77
SSN3YPL042C CNM67P53865 581 aaKnown RBP10.22□□□□□ -0.77
SSN3YPL042C PGA2P53903 129 aa10.22□□□□□ -0.77
SSN3YPL042C ALF1P53904 254 aa10.22□□□□□ -0.77
SSN3YPL042C RBA50Q04418 439 aa10.22□□□□□ -0.77
SSN3YPL042C STB3Q12427 513 aa10.22□□□□□ -0.77
SSN3YPL042C YBL113CQ7M4S9 792 aa10.22□□□□□ -0.77
SSN3YPL042C ESS1P22696 170 aa10.21□□□□□ -0.78
SSN3YPL042C PSO2P30620 661 aa10.21□□□□□ -0.78
SSN3YPL042C HIR2P32480 875 aa10.21□□□□□ -0.78
SSN3YPL042C SIP3P38717 1229 aa10.21□□□□□ -0.78
SSN3YPL042C YHR219WP38900 624 aa10.21□□□□□ -0.78
SSN3YPL042C BEM4P39011 633 aa10.21□□□□□ -0.78
SSN3YPL042C GPD2P41911 440 aaKnown RBP10.21□□□□□ -0.78
SSN3YPL042C CTR1P49573 406 aa10.21□□□□□ -0.78
SSN3YPL042C YMR111CQ04461 462 aaPredicted RBP10.21□□□□□ -0.78
SSN3YPL042C YOR352WQ08816 343 aa10.21□□□□□ -0.78
SSN3YPL042C PGK1P00560 416 aaKnown RBP10.2□□□□□ -0.78
SSN3YPL042C GLK1P17709 500 aaKnown RBP10.2□□□□□ -0.78
SSN3YPL042C DPH5P32469 300 aaPredicted RBP10.2□□□□□ -0.78
SSN3YPL042C EUG1P32474 517 aa10.2□□□□□ -0.78
SSN3YPL042C IXR1P33417 597 aa10.2□□□□□ -0.78
SSN3YPL042C UBP11P36026 717 aa10.2□□□□□ -0.78
SSN3YPL042C TIF5P38431 405 aaKnown RBP10.2□□□□□ -0.78
SSN3YPL042C YGR125WP53273 1036 aa10.2□□□□□ -0.78
SSN3YPL042C DIP5P53388 608 aa10.2□□□□□ -0.78
SSN3YPL042C UTP14Q04500 899 aaKnown RBP10.2□□□□□ -0.78
SSN3YPL042C TLG2Q08144 397 aa10.2□□□□□ -0.78
SSN3YPL042C MRN1Q08925 612 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
SSN3YPL042C YIL002W-AQ3E7Z5 69 aa10.2□□□□□ -0.78
SSN3YPL042C CDC19P00549 500 aaKnown RBP10.19□□□□□ -0.78
SSN3YPL042C RED1P14291 827 aa10.19□□□□□ -0.78
SSN3YPL042C GFD2P25370 566 aaKnown RBP10.19□□□□□ -0.78
SSN3YPL042C RAM2P29703 316 aa10.19□□□□□ -0.78
SSN3YPL042C CLB5P30283 435 aa10.19□□□□□ -0.78
SSN3YPL042C SUV3P32580 737 aa10.19□□□□□ -0.78
SSN3YPL042C PIH1P38768 344 aa10.19□□□□□ -0.78
SSN3YPL042C CRP1P38845 465 aaKnown RBP10.19□□□□□ -0.78
SSN3YPL042C AIP1P46680 615 aaKnown RBP10.19□□□□□ -0.78
SSN3YPL042C VTC4P47075 721 aa10.19□□□□□ -0.78
SSN3YPL042C GUP1P53154 560 aa10.19□□□□□ -0.78
SSN3YPL042C SPC19Q03954 165 aa10.19□□□□□ -0.78
SSN3YPL042C SND1Q04007 877 aa10.19□□□□□ -0.78
SSN3YPL042C CST9Q06032 482 aa10.19□□□□□ -0.78
SSN3YPL042C CDC53Q12018 815 aaKnown RBP10.19□□□□□ -0.78
SSN3YPL042C WHI5Q12416 295 aa10.19□□□□□ -0.78
SSN3YPL042C CDC37P06101 506 aaKnown RBP10.18□□□□□ -0.78
SSN3YPL042C SUP45P12385 437 aaKnown RBP10.18□□□□□ -0.78
SSN3YPL042C CLN3P13365 580 aa10.18□□□□□ -0.78
SSN3YPL042C PFK1P16861 987 aaKnown RBP10.18□□□□□ -0.78
SSN3YPL042C PRP22P24384 1145 aaKnown RBP10.18□□□□□ -0.78
SSN3YPL042C CCL1P37366 393 aa10.18□□□□□ -0.78
SSN3YPL042C STN1P38960 494 aa10.18□□□□□ -0.78
SSN3YPL042C LAM5P43560 674 aa10.18□□□□□ -0.78
SSN3YPL042C SAE2P46946 345 aa10.18□□□□□ -0.78
SSN3YPL042C ATF2P53296 535 aa10.18□□□□□ -0.78
SSN3YPL042C JIP4Q03361 876 aa10.18□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms