RNA–Protein interactions for RNA: YMR129W

POM152, Transcript of Glycoprotein subunit of transmembrane ring of nuclear pore complex, yeast

Gene POM152, Length 4,014 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
POM152	YMR129W	DAM1	P53267	343 aa		3.16	□□□□□ -1.9
POM152	YMR129W	MDM38	Q08179	573 aa		3.16	□□□□□ -1.9
POM152	YMR129W	SSM4	P40318	1319 aa		3.15	□□□□□ -1.9
POM152	YMR129W	RPS9A	O13516	197 aa	Known RBP	3.15	□□□□□ -1.9
POM152	YMR129W	ADH4	P10127	382 aa		3.15	□□□□□ -1.9
POM152	YMR129W	PSY4	P38193	441 aa		3.15	□□□□□ -1.9
POM152	YMR129W	VID28	P40547	921 aa		3.15	□□□□□ -1.9
POM152	YMR129W	RRT6	P53117	311 aa	Predicted RBP	3.15	□□□□□ -1.9
POM152	YMR129W	ARP4	P80428	489 aa		3.15	□□□□□ -1.9
POM152	YMR129W	BLS1	Q06071	122 aa		3.15	□□□□□ -1.9
POM152	YMR129W	RGA2	Q06407	1009 aa		3.15	□□□□□ -1.9
POM152	YMR129W	NSI1	Q12457	570 aa		3.15	□□□□□ -1.9
POM152	YMR129W	ECM32	P32644	1121 aa	Known RBP	3.15	□□□□□ -1.91
POM152	YMR129W	BLI1	P35727	113 aa		3.15	□□□□□ -1.91
POM152	YMR129W	SET3	P36124	751 aa		3.15	□□□□□ -1.91
POM152	YMR129W	SPC72	P39723	622 aa		3.15	□□□□□ -1.91
POM152	YMR129W	ESL1	P40456	1118 aa		3.15	□□□□□ -1.91
POM152	YMR129W	TMA108	P40462	946 aa		3.15	□□□□□ -1.91
POM152	YMR129W	PTA1	Q01329	785 aa	Predicted RBP	3.15	□□□□□ -1.91
POM152	YMR129W	SRT1	Q03175	343 aa		3.15	□□□□□ -1.91
POM152	YMR129W	DPH6	Q12429	685 aa		3.15	□□□□□ -1.91
POM152	YMR129W	DIF1	O13577	133 aa		3.15	□□□□□ -1.91
POM152	YMR129W	ADP1	P25371	1049 aa		3.14	□□□□□ -1.91
POM152	YMR129W	DPH2	P32461	534 aa		3.14	□□□□□ -1.91
POM152	YMR129W	DID4	P36108	232 aa		3.14	□□□□□ -1.91
POM152	YMR129W	APM3	P38153	483 aa		3.14	□□□□□ -1.91
POM152	YMR129W	AXL2	P38928	823 aa		3.14	□□□□□ -1.91
POM152	YMR129W	LYS14	P40971	790 aa		3.14	□□□□□ -1.91
POM152	YMR129W	CCM1	P48237	864 aa	Predicted RBP	3.14	□□□□□ -1.91
POM152	YMR129W	CYS3	P31373	394 aa	Known RBP	3.14	□□□□□ -1.91
POM152	YMR129W	TFC3	P34111	1160 aa		3.14	□□□□□ -1.91
POM152	YMR129W	PEX15	Q08215	383 aa		3.14	□□□□□ -1.91
POM152	YMR129W	RRI2	Q12348	645 aa		3.14	□□□□□ -1.91
POM152	YMR129W	YBR182C-A	Q8TGU6	64 aa		3.14	□□□□□ -1.91
POM152	YMR129W	NCP1	P16603	691 aa	Known RBP	3.14	□□□□□ -1.91
POM152	YMR129W	DIT1	P21623	536 aa		3.14	□□□□□ -1.91
POM152	YMR129W	PHO3	P24031	467 aa		3.14	□□□□□ -1.91
POM152	YMR129W	NAM7	P30771	971 aa	Known RBP	3.14	□□□□□ -1.91
POM152	YMR129W	JNM1	P36224	373 aa		3.14	□□□□□ -1.91
POM152	YMR129W	VPS8	P39702	1274 aa		3.14	□□□□□ -1.91
POM152	YMR129W	HXT16	P47185	567 aa		3.14	□□□□□ -1.91
POM152	YMR129W	RNR4	P49723	345 aa	Known RBP	3.14	□□□□□ -1.91
POM152	YMR129W	SDH1	Q00711	640 aa		3.14	□□□□□ -1.91
POM152	YMR129W	UBP2	Q01476	1272 aa		3.14	□□□□□ -1.91
POM152	YMR129W	NGL1	Q08213	363 aa	Known RBP	3.14	□□□□□ -1.91
POM152	YMR129W	ACM1	Q08981	209 aa		3.14	□□□□□ -1.91
POM152	YMR129W	HAL9	Q12180	1030 aa		3.14	□□□□□ -1.91
POM152	YMR129W	PCD1	Q12524	340 aa		3.14	□□□□□ -1.91
POM152	YMR129W	MSM1	P22438	575 aa		3.13	□□□□□ -1.91
POM152	YMR129W	SWI3	P32591	825 aa		3.13	□□□□□ -1.91
POM152	YMR129W	TRZ1	P36159	838 aa	Predicted RBP	3.13	□□□□□ -1.91
POM152	YMR129W	PGM2	P37012	569 aa	Known RBP	3.13	□□□□□ -1.91
POM152	YMR129W	POA1	P38218	177 aa		3.13	□□□□□ -1.91
POM152	YMR129W	ALG14	P38242	237 aa		3.13	□□□□□ -1.91
POM152	YMR129W	HSL7	P38274	827 aa		3.13	□□□□□ -1.91
POM152	YMR129W	YNL195C	P40168	261 aa		3.13	□□□□□ -1.91
POM152	YMR129W	VTC2	P43585	828 aa		3.13	□□□□□ -1.91
POM152	YMR129W	MTC3	P53077	123 aa		3.13	□□□□□ -1.91
POM152	YMR129W	HDA1	P53973	706 aa		3.13	□□□□□ -1.91
POM152	YMR129W	RKM2	Q03942	479 aa		3.13	□□□□□ -1.91
POM152	YMR129W	MED1	Q12321	566 aa		3.13	□□□□□ -1.91
POM152	YMR129W	NOT3	P06102	836 aa	Known RBP	3.13	□□□□□ -1.91
POM152	YMR129W	URA1	P28272	314 aa	Predicted RBP	3.13	□□□□□ -1.91
POM152	YMR129W	SLC1	P33333	303 aa		3.13	□□□□□ -1.91
POM152	YMR129W	STE13	P33894	931 aa		3.13	□□□□□ -1.91
POM152	YMR129W	MAC1	P35192	417 aa		3.13	□□□□□ -1.91
POM152	YMR129W	CCZ1	P38273	704 aa		3.13	□□□□□ -1.91
POM152	YMR129W	IFA38	P38286	347 aa		3.13	□□□□□ -1.91
POM152	YMR129W	ROG3	P43602	733 aa		3.13	□□□□□ -1.91
POM152	YMR129W	ARC35	P53731	342 aa	Known RBP	3.13	□□□□□ -1.91
POM152	YMR129W	ESF2	P53743	316 aa	Known RBP	3.13	□□□□□ -1.91
POM152	YMR129W	RRG1	Q12167	365 aa	Predicted RBP	3.13	□□□□□ -1.91
POM152	YMR129W	HSE1	P38753	452 aa		3.13	□□□□□ -1.91
POM152	YMR129W	VPS53	P47061	822 aa		3.13	□□□□□ -1.91
POM152	YMR129W	YPL260W	Q08977	551 aa		3.13	□□□□□ -1.91
POM152	YMR129W	CDC48	P25694	835 aa	Known RBP	3.12	□□□□□ -1.91
POM152	YMR129W	DUN1	P39009	513 aa		3.12	□□□□□ -1.91
POM152	YMR129W	VHR1	P40522	640 aa		3.12	□□□□□ -1.91
POM152	YMR129W	IMA5	P40884	581 aa		3.12	□□□□□ -1.91
POM152	YMR129W	SMK1	P41808	388 aa		3.12	□□□□□ -1.91
POM152	YMR129W	GRC3	Q07845	632 aa		3.12	□□□□□ -1.91
POM152	YMR129W	SRP101	P32916	621 aa		3.12	□□□□□ -1.91
POM152	YMR129W	YIL108W	P40483	696 aa	Known RBP	3.12	□□□□□ -1.91
POM152	YMR129W	HFM1	P51979	1187 aa		3.12	□□□□□ -1.91
POM152	YMR129W	GUP1	P53154	560 aa		3.12	□□□□□ -1.91
POM152	YMR129W	BRE5	P53741	515 aa	Known RBP	3.12	□□□□□ -1.91
POM152	YMR129W	HSH49	Q99181	213 aa	Predicted RBP	3.12	□□□□□ -1.91
POM152	YMR129W	NUC1	P08466	329 aa		3.12	□□□□□ -1.91
POM152	YMR129W	SHM2	P37291	469 aa	Known RBP	3.12	□□□□□ -1.91
POM152	YMR129W	FLR1	P38124	548 aa		3.12	□□□□□ -1.91
POM152	YMR129W	GCV1	P48015	400 aa		3.12	□□□□□ -1.91
POM152	YMR129W	ERO1	Q03103	563 aa		3.12	□□□□□ -1.91
POM152	YMR129W	HFI1	Q12060	488 aa		3.12	□□□□□ -1.91
POM152	YMR129W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
POM152	YMR129W	MET8	P15807	274 aa		3.11	□□□□□ -1.91
POM152	YMR129W	YSC84	P32793	468 aa		3.11	□□□□□ -1.91
POM152	YMR129W	BCK2	P33306	851 aa		3.11	□□□□□ -1.91
POM152	YMR129W	SET5	P38890	526 aa	Known RBP	3.11	□□□□□ -1.91
POM152	YMR129W	GYP7	P48365	746 aa		3.11	□□□□□ -1.91
POM152	YMR129W	SCW11	P53189	542 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms