RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W YKR078WP36158 585 aaKnown RBP4.42□□□□□ -1.7
SEN1YLR430W YAP3P38749 330 aa4.42□□□□□ -1.7
SEN1YLR430W IES5P40060 125 aa4.42□□□□□ -1.7
SEN1YLR430W APS3P47064 194 aa4.42□□□□□ -1.7
SEN1YLR430W BFA1P47113 574 aa4.42□□□□□ -1.7
SEN1YLR430W VPS54Q12071 889 aa4.42□□□□□ -1.7
SEN1YLR430W YME1P32795 747 aa4.42□□□□□ -1.7
SEN1YLR430W TPO5P36029 618 aa4.42□□□□□ -1.7
SEN1YLR430W ATP3P38077 311 aaKnown RBP4.42□□□□□ -1.7
SEN1YLR430W RCK2P38623 610 aa4.42□□□□□ -1.7
SEN1YLR430W FMP33P46998 180 aa4.42□□□□□ -1.7
SEN1YLR430W MRM2P53123 320 aa4.42□□□□□ -1.7
SEN1YLR430W VPS64Q03944 604 aa4.42□□□□□ -1.7
SEN1YLR430W ATG13Q06628 738 aa4.42□□□□□ -1.7
SEN1YLR430W ICL2Q12031 575 aa4.42□□□□□ -1.7
SEN1YLR430W SER33P40510 469 aa4.41□□□□□ -1.7
SEN1YLR430W PRP43P53131 767 aaKnown RBP4.41□□□□□ -1.7
SEN1YLR430W RGC1Q06108 1083 aaKnown RBP4.41□□□□□ -1.7
SEN1YLR430W JIP5Q06214 492 aaPredicted RBP4.41□□□□□ -1.7
SEN1YLR430W ACF2Q12168 779 aa4.41□□□□□ -1.7
SEN1YLR430W CMP2P14747 604 aa4.41□□□□□ -1.7
SEN1YLR430W PEX1P24004 1043 aa4.41□□□□□ -1.7
SEN1YLR430W GEF1P37020 779 aa4.41□□□□□ -1.7
SEN1YLR430W YHR218WP38899 603 aa4.41□□□□□ -1.7
SEN1YLR430W ENT3P47160 408 aa4.41□□□□□ -1.7
SEN1YLR430W LGE1Q02796 332 aaKnown RBP4.41□□□□□ -1.7
SEN1YLR430W YMR114CQ04471 368 aaKnown RBP4.41□□□□□ -1.7
SEN1YLR430W YEH2Q07950 538 aa4.41□□□□□ -1.7
SEN1YLR430W YBL111CQ3E7Y5 667 aa4.41□□□□□ -1.7
SEN1YLR430W MRF1P30775 413 aaPredicted RBP4.41□□□□□ -1.7
SEN1YLR430W GCG1P32656 232 aaKnown RBP4.41□□□□□ -1.7
SEN1YLR430W YFH7P43591 353 aa4.41□□□□□ -1.7
SEN1YLR430W NUP84P52891 726 aa4.41□□□□□ -1.7
SEN1YLR430W HPC2Q01448 625 aa4.41□□□□□ -1.7
SEN1YLR430W SRT1Q03175 343 aa4.41□□□□□ -1.7
SEN1YLR430W YBL113CQ7M4S9 792 aa4.41□□□□□ -1.7
SEN1YLR430W KAR1P11927 433 aa4.41□□□□□ -1.7
SEN1YLR430W RPC53P25441 422 aa4.41□□□□□ -1.7
SEN1YLR430W SEC65P29478 273 aa4.41□□□□□ -1.7
SEN1YLR430W CTM1P38818 585 aa4.41□□□□□ -1.7
SEN1YLR430W RPN10P38886 268 aaKnown RBP4.41□□□□□ -1.7
SEN1YLR430W MEU1Q07938 337 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SEN1YLR430W YIL002W-AQ3E7Z5 69 aa4.41□□□□□ -1.7
SEN1YLR430W RSF2P46974 1380 aa4.41□□□□□ -1.7
SEN1YLR430W VMA1P17255 1071 aaKnown RBP4.41□□□□□ -1.7
SEN1YLR430W YDR179W-AQ03983 463 aa4.41□□□□□ -1.7
SEN1YLR430W VIP1Q06685 1146 aaKnown RBP4.41□□□□□ -1.7
SEN1YLR430W MATALPHA2P0CY08 210 aa4.4□□□□□ -1.7
SEN1YLR430W HMLALPHA2P0CY09 210 aa4.4□□□□□ -1.7
SEN1YLR430W PYC1P11154 1178 aaKnown RBP4.4□□□□□ -1.7
SEN1YLR430W PRP6P19735 899 aaPredicted RBP4.4□□□□□ -1.7
SEN1YLR430W ACP1P32463 125 aa4.4□□□□□ -1.7
SEN1YLR430W TRF5P48561 642 aaKnown RBP4.4□□□□□ -1.7
SEN1YLR430W PRO2P54885 456 aaKnown RBP4.4□□□□□ -1.7
SEN1YLR430W VPS36Q06696 566 aa4.4□□□□□ -1.7
SEN1YLR430W YDL114WQ07530 308 aa4.4□□□□□ -1.7
SEN1YLR430W YOL057WQ08225 711 aa4.4□□□□□ -1.7
SEN1YLR430W SPS1P08458 490 aa4.4□□□□□ -1.7
SEN1YLR430W BCK2P33306 851 aa4.4□□□□□ -1.7
SEN1YLR430W ECM21P38167 1117 aaKnown RBP4.4□□□□□ -1.7
SEN1YLR430W GNP1P48813 663 aa4.4□□□□□ -1.7
SEN1YLR430W ZIP2P53061 704 aa4.4□□□□□ -1.7
SEN1YLR430W SLU7Q02775 382 aaKnown RBP4.4□□□□□ -1.7
SEN1YLR430W RSC3Q06639 885 aa4.4□□□□□ -1.7
SEN1YLR430W YOR289WQ12012 251 aaPredicted RBP4.4□□□□□ -1.7
SEN1YLR430W TUS1Q06412 1307 aa4.4□□□□□ -1.7
SEN1YLR430W BAS1P22035 811 aa4.4□□□□□ -1.7
SEN1YLR430W IMD3P50095 523 aaKnown RBP4.4□□□□□ -1.7
SEN1YLR430W EEB1Q02891 456 aa4.4□□□□□ -1.7
SEN1YLR430W FRA1Q07825 749 aa4.4□□□□□ -1.7
SEN1YLR430W SNU66Q12420 587 aaPredicted RBP4.4□□□□□ -1.7
SEN1YLR430W PRI1P10363 409 aa4.4□□□□□ -1.71
SEN1YLR430W SRV2P17555 526 aaKnown RBP4.4□□□□□ -1.71
SEN1YLR430W CLU1Q03690 1277 aaKnown RBP4.4□□□□□ -1.71
SEN1YLR430W URH1Q04179 340 aa4.4□□□□□ -1.71
SEN1YLR430W RPL24AP04449 155 aaKnown RBP4.4□□□□□ -1.71
SEN1YLR430W RAM2P29703 316 aa4.4□□□□□ -1.71
SEN1YLR430W LRG1P35688 1017 aa4.4□□□□□ -1.71
SEN1YLR430W YBR225WP38321 900 aa4.4□□□□□ -1.71
SEN1YLR430W LSM12P38828 187 aaKnown RBP4.4□□□□□ -1.71
SEN1YLR430W YER156CP40093 338 aaKnown RBP4.4□□□□□ -1.71
SEN1YLR430W ARR2Q06597 130 aa4.4□□□□□ -1.71
SEN1YLR430W RTC5Q12108 567 aaKnown RBP4.4□□□□□ -1.71
SEN1YLR430W ENT1Q12518 454 aa4.4□□□□□ -1.71
SEN1YLR430W RPS6AP0CX37 236 aaKnown RBP4.4□□□□□ -1.71
SEN1YLR430W RPS6BP0CX38 236 aaPredicted RBP4.4□□□□□ -1.71
SEN1YLR430W MNN2P38069 597 aa4.4□□□□□ -1.71
SEN1YLR430W BOI2P39969 1040 aa4.4□□□□□ -1.71
SEN1YLR430W PAN2P53010 1115 aaPredicted RBP4.4□□□□□ -1.71
SEN1YLR430W ISU1Q03020 165 aa4.4□□□□□ -1.71
SEN1YLR430W FMP42Q04991 504 aa4.4□□□□□ -1.71
SEN1YLR430W TAF9Q05027 157 aa4.4□□□□□ -1.71
SEN1YLR430W ENT2Q05785 613 aa4.4□□□□□ -1.71
SEN1YLR430W COA4Q05809 96 aa4.4□□□□□ -1.71
SEN1YLR430W SGO1Q08490 590 aa4.4□□□□□ -1.71
SEN1YLR430W SEM1O94742 89 aa4.39□□□□□ -1.71
SEN1YLR430W HSP60P19882 572 aaKnown RBP4.39□□□□□ -1.71
SEN1YLR430W SPS22P25380 463 aa4.39□□□□□ -1.71
SEN1YLR430W BLI1P35727 113 aa4.39□□□□□ -1.71
SEN1YLR430W VHR2P40041 505 aa4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms