RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C ACL4Q03771 387 aa12.99□□□□□ -0.33
BDF1YLR399C NFI1Q12216 726 aa12.99□□□□□ -0.33
BDF1YLR399C IES3Q12345 250 aa12.99□□□□□ -0.33
BDF1YLR399C MAK16P10962 306 aaPredicted RBP12.98□□□□□ -0.33
BDF1YLR399C YAK1P14680 807 aa12.98□□□□□ -0.33
BDF1YLR399C EFT1P32324 842 aaKnown RBP12.98□□□□□ -0.33
BDF1YLR399C GEF1P37020 779 aa12.98□□□□□ -0.33
BDF1YLR399C FMP33P46998 180 aa12.98□□□□□ -0.33
BDF1YLR399C TAF6P53040 516 aa12.98□□□□□ -0.33
BDF1YLR399C CBK1P53894 756 aa12.98□□□□□ -0.33
BDF1YLR399C TIM11P81449 96 aaPredicted RBP12.98□□□□□ -0.33
BDF1YLR399C YOR389WQ08912 624 aa12.98□□□□□ -0.33
BDF1YLR399C CDC53Q12018 815 aaKnown RBP12.98□□□□□ -0.33
BDF1YLR399C YRF1-3P0CX14 1859 aa12.98□□□□□ -0.33
BDF1YLR399C YRF1-7P0CX15 1859 aa12.98□□□□□ -0.33
BDF1YLR399C YRF1-6P53819 1859 aa12.98□□□□□ -0.33
BDF1YLR399C CBF1P17106 351 aa12.98□□□□□ -0.33
BDF1YLR399C ORM1P53224 222 aa12.98□□□□□ -0.33
BDF1YLR399C OSH6Q02201 448 aa12.98□□□□□ -0.33
BDF1YLR399C MUB1Q03162 620 aa12.98□□□□□ -0.33
BDF1YLR399C SXM1Q04175 944 aaKnown RBP12.98□□□□□ -0.33
BDF1YLR399C MSH5Q12175 901 aa12.98□□□□□ -0.33
BDF1YLR399C MSB1P21339 1137 aaKnown RBP12.97□□□□□ -0.33
BDF1YLR399C HIS2P38635 335 aa12.97□□□□□ -0.33
BDF1YLR399C USE1P53146 245 aa12.97□□□□□ -0.33
BDF1YLR399C DRN1P53255 507 aaKnown RBP12.97□□□□□ -0.33
BDF1YLR399C SYH1Q02875 849 aaKnown RBP12.97□□□□□ -0.33
BDF1YLR399C ATG17Q06410 417 aa12.97□□□□□ -0.33
BDF1YLR399C RAM2P29703 316 aa12.97□□□□□ -0.33
BDF1YLR399C BOI1P38041 980 aaKnown RBP12.97□□□□□ -0.33
BDF1YLR399C VHC1P38329 1120 aa12.97□□□□□ -0.33
BDF1YLR399C RRT2P38332 387 aa12.97□□□□□ -0.33
BDF1YLR399C CIT3P43635 486 aa12.97□□□□□ -0.33
BDF1YLR399C YGR016WP53209 190 aa12.97□□□□□ -0.33
BDF1YLR399C DSE4P53753 1117 aa12.97□□□□□ -0.33
BDF1YLR399C OXR1Q08952 273 aa12.97□□□□□ -0.33
BDF1YLR399C SCP160P06105 1222 aaKnown RBP RIP-Chip data12.96□□□□□ -0.33not detected
BDF1YLR399C KIP1P28742 1111 aa12.96□□□□□ -0.33
BDF1YLR399C MET4P32389 672 aa12.96□□□□□ -0.33
BDF1YLR399C TFC4P33339 1025 aa12.96□□□□□ -0.33
BDF1YLR399C KTR2P33550 425 aa12.96□□□□□ -0.33
BDF1YLR399C YKR078WP36158 585 aaKnown RBP12.96□□□□□ -0.33
BDF1YLR399C OAF1P39720 1047 aaPredicted RBP12.96□□□□□ -0.33
BDF1YLR399C YNL247WP53852 767 aaKnown RBP12.96□□□□□ -0.33
BDF1YLR399C MTG1Q03151 367 aaPredicted RBP12.96□□□□□ -0.33
BDF1YLR399C BUG1Q12191 341 aa12.96□□□□□ -0.33
BDF1YLR399C YEL076C-AP0CX16 216 aa12.95□□□□□ -0.34
BDF1YLR399C YLR464WP0CX17 216 aa12.95□□□□□ -0.34
BDF1YLR399C HES1P35843 434 aa12.95□□□□□ -0.34
BDF1YLR399C YKL023WP36103 277 aaKnown RBP12.95□□□□□ -0.34
BDF1YLR399C MSG5P38590 489 aa12.95□□□□□ -0.34
BDF1YLR399C MMS21P38632 267 aa12.95□□□□□ -0.34
BDF1YLR399C YEL076CP39971 216 aa12.95□□□□□ -0.34
BDF1YLR399C HXT8P40886 569 aa12.95□□□□□ -0.34
BDF1YLR399C MRM1P25270 412 aa12.95□□□□□ -0.34
BDF1YLR399C TRK2P28584 889 aa12.95□□□□□ -0.34
BDF1YLR399C PRP40P33203 583 aaKnown RBP12.95□□□□□ -0.34
BDF1YLR399C END3P39013 349 aa12.95□□□□□ -0.34
BDF1YLR399C IES2P40154 320 aa12.95□□□□□ -0.34
BDF1YLR399C UTP22P53254 1237 aaPredicted RBP12.95□□□□□ -0.34
BDF1YLR399C RGA2Q06407 1009 aa12.95□□□□□ -0.34
BDF1YLR399C TDA5Q06417 326 aaKnown RBP12.95□□□□□ -0.34
BDF1YLR399C SGT2Q12118 346 aaKnown RBP12.95□□□□□ -0.34
BDF1YLR399C YLL054CQ12244 843 aa12.95□□□□□ -0.34
BDF1YLR399C DPB2P24482 689 aaPredicted RBP12.94□□□□□ -0.34
BDF1YLR399C PUF4P25339 888 aaKnown RBP RIP-Chip data12.94□□□□□ -0.34not detected
BDF1YLR399C EUG1P32474 517 aa12.94□□□□□ -0.34
BDF1YLR399C TSR2Q06672 205 aaKnown RBP12.94□□□□□ -0.34
BDF1YLR399C RLP24Q07915 199 aaKnown RBP12.94□□□□□ -0.34
BDF1YLR399C FRD1P32614 470 aaKnown RBP12.93□□□□□ -0.34
BDF1YLR399C RNR4P49723 345 aaKnown RBP12.93□□□□□ -0.34
BDF1YLR399C HAT1Q12341 374 aa12.93□□□□□ -0.34
BDF1YLR399C HEM15P16622 393 aa12.93□□□□□ -0.34
BDF1YLR399C URA4P20051 364 aa12.93□□□□□ -0.34
BDF1YLR399C MGM1P32266 881 aa12.93□□□□□ -0.34
BDF1YLR399C UBP13P38187 747 aa12.93□□□□□ -0.34
BDF1YLR399C TAF1P46677 1066 aa12.93□□□□□ -0.34
BDF1YLR399C PTA1Q01329 785 aaPredicted RBP12.93□□□□□ -0.34
BDF1YLR399C YDR179W-AQ03983 463 aa12.93□□□□□ -0.34
BDF1YLR399C NOC3Q07896 663 aaPredicted RBP12.93□□□□□ -0.34
BDF1YLR399C VIK1Q12045 647 aa12.93□□□□□ -0.34
BDF1YLR399C RIM15P43565 1770 aa12.92□□□□□ -0.34
BDF1YLR399C MRPL25P23369 157 aa12.92□□□□□ -0.34
BDF1YLR399C SAS3P34218 831 aa12.92□□□□□ -0.34
BDF1YLR399C TFG1P41895 735 aaPredicted RBP12.92□□□□□ -0.34
BDF1YLR399C SQS1P53866 767 aaKnown RBP12.92□□□□□ -0.34
BDF1YLR399C HMO1Q03973 246 aaKnown RBP12.92□□□□□ -0.34
BDF1YLR399C SEM1O94742 89 aa12.92□□□□□ -0.34
BDF1YLR399C THS1P04801 734 aaKnown RBP12.92□□□□□ -0.34
BDF1YLR399C RPN2P32565 945 aaKnown RBP12.92□□□□□ -0.34
BDF1YLR399C MRP8P35719 219 aa12.92□□□□□ -0.34
BDF1YLR399C PTK1P36002 662 aaPredicted RBP12.92□□□□□ -0.34
BDF1YLR399C SDS3P40505 327 aa12.92□□□□□ -0.34
BDF1YLR399C GUP1P53154 560 aa12.92□□□□□ -0.34
BDF1YLR399C MSH6Q03834 1242 aa12.92□□□□□ -0.34
BDF1YLR399C FAL1Q12099 399 aaKnown RBP12.92□□□□□ -0.34
BDF1YLR399C GET4Q12125 312 aa12.92□□□□□ -0.34
BDF1YLR399C TAF3Q12297 353 aa12.92□□□□□ -0.34
BDF1YLR399C CKA2P19454 339 aa12.91□□□□□ -0.34
BDF1YLR399C FES1P38260 290 aa12.91□□□□□ -0.34
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms