RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C YER186CP40101 306 aa5.55□□□□□ -1.52
BUD28YLR062C OYE3P41816 400 aaPredicted RBP5.55□□□□□ -1.52
BUD28YLR062C ORC5P50874 479 aa5.55□□□□□ -1.52
BUD28YLR062C SHE10P53075 577 aa5.55□□□□□ -1.52
BUD28YLR062C PSR2Q07949 397 aa5.55□□□□□ -1.52
BUD28YLR062C YPL277CQ08989 487 aa5.55□□□□□ -1.52
BUD28YLR062C CDC53Q12018 815 aaKnown RBP5.55□□□□□ -1.52
BUD28YLR062C YPR015CQ12531 247 aa5.55□□□□□ -1.52
BUD28YLR062C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
BUD28YLR062C DAL7P21826 554 aa5.54□□□□□ -1.52
BUD28YLR062C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.54□□□□□ -1.52not detected
BUD28YLR062C SEC21P32074 935 aaKnown RBP5.54□□□□□ -1.52
BUD28YLR062C GCS1P35197 352 aa5.54□□□□□ -1.52
BUD28YLR062C MMS4P38257 691 aa5.54□□□□□ -1.52
BUD28YLR062C XDJ1P39102 459 aa5.54□□□□□ -1.52
BUD28YLR062C NBP1P52919 319 aaPredicted RBP5.54□□□□□ -1.52
BUD28YLR062C YGR130CP53278 816 aa5.54□□□□□ -1.52
BUD28YLR062C YNR014WP53719 212 aa5.54□□□□□ -1.52
BUD28YLR062C TBF1Q02457 562 aa5.54□□□□□ -1.52
BUD28YLR062C LCD1Q04377 747 aa5.54□□□□□ -1.52
BUD28YLR062C RPL4AP10664 362 aaKnown RBP5.53□□□□□ -1.52
BUD28YLR062C PHO8P11491 566 aa5.53□□□□□ -1.52
BUD28YLR062C CDC15P27636 974 aa5.53□□□□□ -1.52
BUD28YLR062C PRR1P28708 518 aa5.53□□□□□ -1.52
BUD28YLR062C HEL1P36113 551 aa5.53□□□□□ -1.52
BUD28YLR062C CCL1P37366 393 aa5.53□□□□□ -1.52
BUD28YLR062C RDH54P38086 958 aa5.53□□□□□ -1.52
BUD28YLR062C APM2P38700 605 aa5.53□□□□□ -1.52
BUD28YLR062C BDH2P39713 417 aa5.53□□□□□ -1.52
BUD28YLR062C SNF7P39929 240 aaKnown RBP5.53□□□□□ -1.52
BUD28YLR062C BIM1P40013 344 aa5.53□□□□□ -1.52
BUD28YLR062C MMF1P40185 145 aaKnown RBP5.53□□□□□ -1.52
BUD28YLR062C HUL4P40985 892 aa5.53□□□□□ -1.52
BUD28YLR062C YFL034WP43564 1073 aa5.53□□□□□ -1.52
BUD28YLR062C ASN1P49089 572 aaKnown RBP5.53□□□□□ -1.52
BUD28YLR062C RPL4BP49626 362 aaKnown RBP5.53□□□□□ -1.52
BUD28YLR062C ALG11P53954 548 aaKnown RBP5.53□□□□□ -1.52
BUD28YLR062C EEB1Q02891 456 aa5.53□□□□□ -1.52
BUD28YLR062C TFB3Q03290 321 aa5.53□□□□□ -1.52
BUD28YLR062C ERF2Q06551 359 aa5.53□□□□□ -1.52
BUD28YLR062C PEX19Q07418 342 aa5.53□□□□□ -1.52
BUD28YLR062C SHS1Q07657 551 aa5.53□□□□□ -1.52
BUD28YLR062C BUD20Q08004 166 aaPredicted RBP5.53□□□□□ -1.52
BUD28YLR062C DNL4Q08387 944 aaPredicted RBP5.53□□□□□ -1.52
BUD28YLR062C TCO89Q08921 799 aa5.53□□□□□ -1.52
BUD28YLR062C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
BUD28YLR062C PKH2Q12236 1081 aaKnown RBP5.53□□□□□ -1.52
BUD28YLR062C PRT1P06103 763 aaKnown RBP5.52□□□□□ -1.53
BUD28YLR062C PAT1P25644 796 aaKnown RBP5.52□□□□□ -1.53
BUD28YLR062C TRK2P28584 889 aa5.52□□□□□ -1.53
BUD28YLR062C CYS3P31373 394 aaKnown RBP5.52□□□□□ -1.53
BUD28YLR062C BCK2P33306 851 aa5.52□□□□□ -1.53
BUD28YLR062C CCC2P38995 1004 aa5.52□□□□□ -1.53
BUD28YLR062C YIR016WP40572 265 aa5.52□□□□□ -1.53
BUD28YLR062C HYR1P40581 163 aaKnown RBP5.52□□□□□ -1.53
BUD28YLR062C SCD6P45978 349 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
BUD28YLR062C CCM1P48237 864 aaPredicted RBP5.52□□□□□ -1.53
BUD28YLR062C STB4P50104 949 aa5.52□□□□□ -1.53
BUD28YLR062C VID30P53076 958 aa5.52□□□□□ -1.53
BUD28YLR062C RCR2Q03446 210 aaKnown RBP5.52□□□□□ -1.53
BUD28YLR062C UTP14Q04500 899 aaKnown RBP5.52□□□□□ -1.53
BUD28YLR062C PIG1Q06216 648 aa5.52□□□□□ -1.53
BUD28YLR062C MRI1Q06489 411 aaKnown RBP5.52□□□□□ -1.53
BUD28YLR062C ESC8Q08119 714 aa5.52□□□□□ -1.53
BUD28YLR062C PUS1Q12211 544 aaKnown RBP5.52□□□□□ -1.53
BUD28YLR062C OSH2Q12451 1283 aa5.52□□□□□ -1.53
BUD28YLR062C TOR2P32600 2474 aaKnown RBP5.51□□□□□ -1.53
BUD28YLR062C RPL22AP05749 121 aaKnown RBP5.51□□□□□ -1.53
BUD28YLR062C HAP2P06774 265 aa5.51□□□□□ -1.53
BUD28YLR062C CIT2P08679 460 aa5.51□□□□□ -1.53
BUD28YLR062C TAF13P11747 167 aa5.51□□□□□ -1.53
BUD28YLR062C YJU3P28321 313 aa5.51□□□□□ -1.53
BUD28YLR062C PEX2P32800 271 aa5.51□□□□□ -1.53
BUD28YLR062C ELM1P32801 640 aa5.51□□□□□ -1.53
BUD28YLR062C TRM2P33753 639 aa5.51□□□□□ -1.53
BUD28YLR062C HMT1P38074 348 aa5.51□□□□□ -1.53
BUD28YLR062C SAF1P38352 637 aa5.51□□□□□ -1.53
BUD28YLR062C LCB2P40970 561 aa5.51□□□□□ -1.53
BUD28YLR062C YJL045WP47052 634 aa5.51□□□□□ -1.53
BUD28YLR062C HST1P53685 503 aa5.51□□□□□ -1.53
BUD28YLR062C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.51□□□□□ -1.53not detected
BUD28YLR062C CTF3Q12748 733 aa5.51□□□□□ -1.53
BUD28YLR062C DDP1Q99321 188 aaKnown RBP5.51□□□□□ -1.53
BUD28YLR062C TY1A-DR4O74302 440 aa5.5□□□□□ -1.53
BUD28YLR062C ATP1P07251 545 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C TY1A-HP0C2I4 478 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C TY1A-AP0CX57 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-PR1P0CX58 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-ORP0CX59 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-PR2P0CX60 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-DR5P0CX65 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-ER2P0CX66 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-GR3P0CX67 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-LR1P0CX68 440 aa5.5□□□□□ -1.53
BUD28YLR062C TY1A-MR2P0CX69 440 aa5.5□□□□□ -1.53
BUD28YLR062C MRF1P30775 413 aaPredicted RBP5.5□□□□□ -1.53
BUD28YLR062C SPT16P32558 1035 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C MUD1P32605 298 aaKnown RBP5.5□□□□□ -1.53
BUD28YLR062C NPP2P39997 493 aa5.5□□□□□ -1.53
BUD28YLR062C RRN7P40992 514 aa5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms