RNA–Protein interactions for RNA: YKL046C

DCW1, Transcript of Putative mannosidase, yeast

Gene DCW1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DCW1	YKL046C	GAP1	P19145	602 aa	Predicted RBP	13.26	□□□□□ -0.29
DCW1	YKL046C	TFC4	P33339	1025 aa		13.26	□□□□□ -0.29
DCW1	YKL046C	SPC72	P39723	622 aa		13.26	□□□□□ -0.29
DCW1	YKL046C	ATG1	P53104	897 aa		13.26	□□□□□ -0.29
DCW1	YKL046C	TAF10	Q12030	206 aa		13.26	□□□□□ -0.29
DCW1	YKL046C	JIP3	O13555	125 aa		13.25	□□□□□ -0.29
DCW1	YKL046C	POL3	P15436	1097 aa		13.25	□□□□□ -0.29
DCW1	YKL046C	DBP5	P20449	482 aa	Known RBP	13.25	□□□□□ -0.29
DCW1	YKL046C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	13.25	□□□□□ -0.29	not detected
DCW1	YKL046C	INA22	P40576	216 aa		13.25	□□□□□ -0.29
DCW1	YKL046C	CLA4	P48562	842 aa		13.25	□□□□□ -0.29
DCW1	YKL046C	TAM41	P53230	385 aa		13.25	□□□□□ -0.29
DCW1	YKL046C	RPL22B	P56628	122 aa	Known RBP	13.25	□□□□□ -0.29
DCW1	YKL046C	YML037C	Q03703	340 aa		13.25	□□□□□ -0.29
DCW1	YKL046C	YDR222W	Q04925	415 aa		13.25	□□□□□ -0.29
DCW1	YKL046C	SRV2	P17555	526 aa	Known RBP	13.24	□□□□□ -0.29
DCW1	YKL046C	RRN6	P32786	894 aa		13.24	□□□□□ -0.29
DCW1	YKL046C	SQT1	P35184	431 aa		13.24	□□□□□ -0.29
DCW1	YKL046C	HEL1	P36113	551 aa		13.24	□□□□□ -0.29
DCW1	YKL046C	MSG5	P38590	489 aa		13.24	□□□□□ -0.29
DCW1	YKL046C	ACA1	P39970	489 aa		13.24	□□□□□ -0.29
DCW1	YKL046C	YTA12	P40341	825 aa		13.24	□□□□□ -0.29
DCW1	YKL046C	NOB1	Q08444	459 aa	Known RBP	13.24	□□□□□ -0.29
DCW1	YKL046C	CDC53	Q12018	815 aa	Known RBP	13.24	□□□□□ -0.29
DCW1	YKL046C	SAM1	P10659	382 aa	Known RBP	13.23	□□□□□ -0.29
DCW1	YKL046C	GAL11	P19659	1081 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	MSM1	P22438	575 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	MUD1	P32605	298 aa	Known RBP	13.23	□□□□□ -0.29
DCW1	YKL046C	YBL055C	P34220	418 aa	Predicted RBP	13.23	□□□□□ -0.29
DCW1	YKL046C	ASG1	P40467	964 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	TDA10	P42938	290 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	YML119W	Q03208	357 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	ATG16	Q03818	150 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	FAR8	Q05040	523 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	DUS4	Q06063	367 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	CRD1	Q07560	283 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	GUD1	Q07729	489 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	NCR1	Q12200	1170 aa		13.23	□□□□□ -0.29
DCW1	YKL046C	DBF4	P32325	704 aa		13.22	□□□□□ -0.29
DCW1	YKL046C	PTC3	P34221	468 aa	Known RBP	13.22	□□□□□ -0.29
DCW1	YKL046C	YKR018C	P36114	725 aa		13.22	□□□□□ -0.29
DCW1	YKL046C	NIT1	P40447	199 aa		13.22	□□□□□ -0.29
DCW1	YKL046C	YGR111W	P53265	400 aa		13.22	□□□□□ -0.29
DCW1	YKL046C	PTA1	Q01329	785 aa	Predicted RBP	13.22	□□□□□ -0.29
DCW1	YKL046C	YLR177W	Q06251	628 aa		13.22	□□□□□ -0.29
DCW1	YKL046C	RIB2	Q12362	591 aa	Known RBP	13.22	□□□□□ -0.29
DCW1	YKL046C	CBP1	P07252	654 aa		13.21	□□□□□ -0.29
DCW1	YKL046C	ARD1	P07347	238 aa	Predicted RBP	13.21	□□□□□ -0.29
DCW1	YKL046C	CBF1	P17106	351 aa		13.21	□□□□□ -0.29
DCW1	YKL046C	DAL2	P25335	343 aa		13.21	□□□□□ -0.29
DCW1	YKL046C	RIM101	P33400	625 aa		13.21	□□□□□ -0.29
DCW1	YKL046C	VHC1	P38329	1120 aa		13.21	□□□□□ -0.29
DCW1	YKL046C	SUB1	P54000	292 aa	Known RBP	13.21	□□□□□ -0.29
DCW1	YKL046C	SPH1	Q06160	661 aa		13.21	□□□□□ -0.29
DCW1	YKL046C	CMS1	Q07897	291 aa	Known RBP	13.21	□□□□□ -0.29
DCW1	YKL046C	NIP1	P32497	812 aa	Known RBP	13.2	□□□□□ -0.3
DCW1	YKL046C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	13.2	□□□□□ -0.3	not detected
DCW1	YKL046C	MAG2	Q06436	670 aa	Known RBP	13.2	□□□□□ -0.3
DCW1	YKL046C	ATG20	Q07528	640 aa		13.2	□□□□□ -0.3
DCW1	YKL046C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	13.2	□□□□□ -0.3	not detected
DCW1	YKL046C	HPR1	P17629	752 aa	Known RBP	13.2	□□□□□ -0.3
DCW1	YKL046C	DAS1	P47005	663 aa		13.2	□□□□□ -0.3
DCW1	YKL046C	AVT1	P47082	602 aa		13.2	□□□□□ -0.3
DCW1	YKL046C	SHR3	Q02774	210 aa		13.2	□□□□□ -0.3
DCW1	YKL046C	VPS16	Q03308	798 aa		13.2	□□□□□ -0.3
DCW1	YKL046C	YML002W	P0CF17	737 aa		13.19	□□□□□ -0.3
DCW1	YKL046C	HEM15	P16622	393 aa		13.19	□□□□□ -0.3
DCW1	YKL046C	SPO16	P17122	198 aa		13.19	□□□□□ -0.3
DCW1	YKL046C	BAS1	P22035	811 aa		13.19	□□□□□ -0.3
DCW1	YKL046C	SWH1	P35845	1188 aa		13.19	□□□□□ -0.3
DCW1	YKL046C	SSP1	P38871	571 aa		13.19	□□□□□ -0.3
DCW1	YKL046C	TMA22	P47089	198 aa	Predicted RBP	13.19	□□□□□ -0.3
DCW1	YKL046C	YPL109C	Q02981	657 aa		13.19	□□□□□ -0.3
DCW1	YKL046C	HOT1	Q03213	719 aa		13.19	□□□□□ -0.3
DCW1	YKL046C	PPM1	Q04081	328 aa		13.19	□□□□□ -0.3
DCW1	YKL046C	RPS9B	P05755	195 aa	Known RBP	13.18	□□□□□ -0.3
DCW1	YKL046C	GCR1	P07261	785 aa		13.18	□□□□□ -0.3
DCW1	YKL046C	ILV2	P07342	687 aa	Known RBP	13.18	□□□□□ -0.3
DCW1	YKL046C	PRP4	P20053	465 aa	Known RBP	13.18	□□□□□ -0.3
DCW1	YKL046C	SFL1	P20134	766 aa		13.18	□□□□□ -0.3
DCW1	YKL046C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	13.18	□□□□□ -0.3	not detected
DCW1	YKL046C	CSG2	P35206	410 aa		13.18	□□□□□ -0.3
DCW1	YKL046C	RPC37	P36121	282 aa		13.18	□□□□□ -0.3
DCW1	YKL046C	PHO86	P46956	311 aa		13.18	□□□□□ -0.3
DCW1	YKL046C	CPR7	P47103	393 aa		13.18	□□□□□ -0.3
DCW1	YKL046C	YGR117C	P53270	476 aa		13.18	□□□□□ -0.3
DCW1	YKL046C	UFO1	Q04511	668 aa		13.18	□□□□□ -0.3
DCW1	YKL046C	DUS3	Q06053	668 aa	Known RBP	13.18	□□□□□ -0.3
DCW1	YKL046C	RNA1	P11745	407 aa	Known RBP	13.17	□□□□□ -0.3
DCW1	YKL046C	CDC42	P19073	191 aa		13.17	□□□□□ -0.3
DCW1	YKL046C	SHP1	P34223	423 aa		13.17	□□□□□ -0.3
DCW1	YKL046C	MRX3	P38172	270 aa		13.17	□□□□□ -0.3
DCW1	YKL046C	YBR032W	P38223	100 aa		13.17	□□□□□ -0.3
DCW1	YKL046C	YMR134W	P40207	237 aa		13.17	□□□□□ -0.3
DCW1	YKL046C	ZIP2	P53061	704 aa		13.17	□□□□□ -0.3
DCW1	YKL046C	SPC24	Q04477	213 aa		13.17	□□□□□ -0.3
DCW1	YKL046C	TDA5	Q06417	326 aa	Known RBP	13.17	□□□□□ -0.3
DCW1	YKL046C	SUB2	Q07478	446 aa	Known RBP	13.17	□□□□□ -0.3
DCW1	YKL046C	IME1	P21190	360 aa		13.16	□□□□□ -0.3
DCW1	YKL046C	RNR1	P21524	888 aa	Known RBP	13.16	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms