RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeastyeast

Gene SOD1, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD1YJR104C ECM29P38737 1868 aa3.83□□□□□ -1.8
SOD1YJR104C PDR18P53756 1333 aa3.82□□□□□ -1.8
SOD1YJR104C CDC19P00549 500 aaKnown RBP3.82□□□□□ -1.8
SOD1YJR104C CDC4P07834 779 aa3.82□□□□□ -1.8
SOD1YJR104C SUI3P09064 285 aaKnown RBP3.82□□□□□ -1.8
SOD1YJR104C NAT1P12945 854 aaKnown RBP3.82□□□□□ -1.8
SOD1YJR104C TAL1P15019 335 aaKnown RBP3.82□□□□□ -1.8
SOD1YJR104C GAL11P19659 1081 aa3.82□□□□□ -1.8
SOD1YJR104C PUF4P25339 888 aaKnown RBP RIP-Chip data3.82□□□□□ -1.8not detected
SOD1YJR104C BUD14P27637 709 aa3.82□□□□□ -1.8
SOD1YJR104C YEL043WP32618 956 aa3.82□□□□□ -1.8
SOD1YJR104C DUR3P33413 735 aa3.82□□□□□ -1.8
SOD1YJR104C SCD5P34758 872 aa3.82□□□□□ -1.8
SOD1YJR104C BRN1P38170 754 aa3.82□□□□□ -1.8
SOD1YJR104C YBR197CP38306 217 aa3.82□□□□□ -1.8
SOD1YJR104C PPX1P38698 397 aa3.82□□□□□ -1.8
SOD1YJR104C ERC1P38767 581 aa3.82□□□□□ -1.8
SOD1YJR104C TVP23P38962 199 aa3.82□□□□□ -1.8
SOD1YJR104C TIF4631P39935 952 aaKnown RBP3.82□□□□□ -1.8
SOD1YJR104C FAF1P40546 346 aaPredicted RBP3.82□□□□□ -1.8
SOD1YJR104C YFH7P43591 353 aa3.82□□□□□ -1.8
SOD1YJR104C TAF1P46677 1066 aa3.82□□□□□ -1.8
SOD1YJR104C YGR125WP53273 1036 aa3.82□□□□□ -1.8
SOD1YJR104C BTN2P53286 410 aa3.82□□□□□ -1.8
SOD1YJR104C HEF3P53978 1044 aaKnown RBP3.82□□□□□ -1.8
SOD1YJR104C YML037CQ03703 340 aa3.82□□□□□ -1.8
SOD1YJR104C FAR8Q05040 523 aa3.82□□□□□ -1.8
SOD1YJR104C MET32Q12041 191 aa3.82□□□□□ -1.8
SOD1YJR104C RAS1P01119 309 aa3.81□□□□□ -1.8
SOD1YJR104C SNF3P10870 884 aa3.81□□□□□ -1.8
SOD1YJR104C GCD2P12754 651 aaPredicted RBP3.81□□□□□ -1.8
SOD1YJR104C KAR2P16474 682 aaKnown RBP3.81□□□□□ -1.8
SOD1YJR104C RPN2P32565 945 aaKnown RBP3.81□□□□□ -1.8
SOD1YJR104C NFU1P32860 256 aa3.81□□□□□ -1.8
SOD1YJR104C TIM23P32897 222 aa3.81□□□□□ -1.8
SOD1YJR104C RPT3P33298 428 aaKnown RBP3.81□□□□□ -1.8
SOD1YJR104C SEC66P33754 206 aa3.81□□□□□ -1.8
SOD1YJR104C NMD3P38861 518 aaKnown RBP3.81□□□□□ -1.8
SOD1YJR104C HXT13P39924 564 aa3.81□□□□□ -1.8
SOD1YJR104C OPT1P40897 799 aa3.81□□□□□ -1.8
SOD1YJR104C TFG2P41896 400 aaPredicted RBP3.81□□□□□ -1.8
SOD1YJR104C GCN20P43535 752 aaKnown RBP3.81□□□□□ -1.8
SOD1YJR104C SET2P46995 733 aaKnown RBP3.81□□□□□ -1.8
SOD1YJR104C PEX14P53112 341 aa3.81□□□□□ -1.8
SOD1YJR104C LSG1P53145 640 aaKnown RBP3.81□□□□□ -1.8
SOD1YJR104C YGR266WP53326 701 aa3.81□□□□□ -1.8
SOD1YJR104C DSL1P53847 754 aa3.81□□□□□ -1.8
SOD1YJR104C NCS2P53923 493 aaPredicted RBP3.81□□□□□ -1.8
SOD1YJR104C RMD1Q03441 430 aa3.81□□□□□ -1.8
SOD1YJR104C SRC1Q03707 834 aa3.81□□□□□ -1.8
SOD1YJR104C MMR1Q06324 491 aa3.81□□□□□ -1.8
SOD1YJR104C THI22Q06490 572 aa3.81□□□□□ -1.8
SOD1YJR104C YCG1Q06680 1035 aa3.81□□□□□ -1.8
SOD1YJR104C PCL8Q08966 492 aa3.81□□□□□ -1.8
SOD1YJR104C CCH1P50077 2039 aa3.8□□□□□ -1.8
SOD1YJR104C PCK1P10963 549 aa3.8□□□□□ -1.8
SOD1YJR104C MSD1P15179 658 aaKnown RBP3.8□□□□□ -1.8
SOD1YJR104C TUP1P16649 713 aa3.8□□□□□ -1.8
SOD1YJR104C TYR1P20049 452 aa3.8□□□□□ -1.8
SOD1YJR104C UBC1P21734 215 aaKnown RBP3.8□□□□□ -1.8
SOD1YJR104C PRD1P25375 712 aa3.8□□□□□ -1.8
SOD1YJR104C UTR4P32626 227 aa3.8□□□□□ -1.8
SOD1YJR104C YEL1P34225 687 aa3.8□□□□□ -1.8
SOD1YJR104C SRL3P36167 246 aa3.8□□□□□ -1.8
SOD1YJR104C REI1P38344 393 aaPredicted RBP3.8□□□□□ -1.8
SOD1YJR104C MGE1P38523 228 aa3.8□□□□□ -1.8
SOD1YJR104C CAJ1P39101 391 aa3.8□□□□□ -1.8
SOD1YJR104C YTA6P40328 754 aa3.8□□□□□ -1.8
SOD1YJR104C MOB1P40484 314 aa3.8□□□□□ -1.8
SOD1YJR104C VID28P40547 921 aa3.8□□□□□ -1.8
SOD1YJR104C YIL001WP40560 513 aa3.8□□□□□ -1.8
SOD1YJR104C YIR042CP40586 236 aa3.8□□□□□ -1.8
SOD1YJR104C OSW7P43611 510 aa3.8□□□□□ -1.8
SOD1YJR104C VPS53P47061 822 aa3.8□□□□□ -1.8
SOD1YJR104C APT1P49435 187 aaKnown RBP3.8□□□□□ -1.8
SOD1YJR104C SUT1P53032 299 aaKnown RBP3.8□□□□□ -1.8
SOD1YJR104C ORM1P53224 222 aa3.8□□□□□ -1.8
SOD1YJR104C RRP46P53256 223 aaPredicted RBP3.8□□□□□ -1.8
SOD1YJR104C HDA1P53973 706 aa3.8□□□□□ -1.8
SOD1YJR104C TIM11P81449 96 aaPredicted RBP3.8□□□□□ -1.8
SOD1YJR104C SEC5P89102 971 aa3.8□□□□□ -1.8
SOD1YJR104C VTC3Q02725 835 aa3.8□□□□□ -1.8
SOD1YJR104C MFM1Q02783 413 aa3.8□□□□□ -1.8
SOD1YJR104C YML119WQ03208 357 aa3.8□□□□□ -1.8
SOD1YJR104C NUT2Q06213 157 aa3.8□□□□□ -1.8
SOD1YJR104C ATG23Q06671 453 aa3.8□□□□□ -1.8
SOD1YJR104C UTP4Q06679 776 aaKnown RBP3.8□□□□□ -1.8
SOD1YJR104C PSR1Q07800 427 aa3.8□□□□□ -1.8
SOD1YJR104C ISA1Q07821 250 aaPredicted RBP3.8□□□□□ -1.8
SOD1YJR104C SLK19Q08581 821 aaKnown RBP3.8□□□□□ -1.8
SOD1YJR104C CIR2Q08822 631 aa3.8□□□□□ -1.8
SOD1YJR104C BRR1Q99177 341 aaPredicted RBP3.8□□□□□ -1.8
SOD1YJR104C MEX67Q99257 599 aaKnown RBP3.8□□□□□ -1.8
SOD1YJR104C MLP1Q02455 1875 aaKnown RBP3.79□□□□□ -1.8
SOD1YJR104C PRC1P00729 532 aa3.79□□□□□ -1.8
SOD1YJR104C YMR085WP0CF18 432 aa3.79□□□□□ -1.8
SOD1YJR104C RPL19AP0CX82 189 aaKnown RBP3.79□□□□□ -1.8
SOD1YJR104C RPL19BP0CX83 189 aaPredicted RBP3.79□□□□□ -1.8
SOD1YJR104C FRS2P15625 503 aaKnown RBP3.79□□□□□ -1.8
SOD1YJR104C MRPL33P20084 86 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms