RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W CDC27P38042 758 aa6.76□□□□□ -1.33
GEF1YJR040W NUP60P39705 539 aa6.76□□□□□ -1.33
GEF1YJR040W NUP82P40368 713 aa6.76□□□□□ -1.33
GEF1YJR040W TAD1P53065 400 aa6.76□□□□□ -1.33
GEF1YJR040W ORC4P54791 529 aa6.76□□□□□ -1.33
GEF1YJR040W YPR097WQ06839 1073 aa6.76□□□□□ -1.33
GEF1YJR040W RIB2Q12362 591 aaKnown RBP6.76□□□□□ -1.33
GEF1YJR040W ARP6Q12509 438 aa6.76□□□□□ -1.33
GEF1YJR040W SRF1Q12516 437 aa6.76□□□□□ -1.33
GEF1YJR040W PGK1P00560 416 aaKnown RBP6.75□□□□□ -1.33
GEF1YJR040W MCM1P11746 286 aa6.75□□□□□ -1.33
GEF1YJR040W RPC53P25441 422 aa6.75□□□□□ -1.33
GEF1YJR040W RPL5P26321 297 aaKnown RBP6.75□□□□□ -1.33
GEF1YJR040W ASH1P34233 588 aa6.75□□□□□ -1.33
GEF1YJR040W TDA11P38854 504 aa6.75□□□□□ -1.33
GEF1YJR040W HMF1P40037 129 aaKnown RBP6.75□□□□□ -1.33
GEF1YJR040W GVP36P40531 326 aaKnown RBP6.75□□□□□ -1.33
GEF1YJR040W TOS3P43637 560 aa6.75□□□□□ -1.33
GEF1YJR040W IST1P53843 298 aaPredicted RBP6.75□□□□□ -1.33
GEF1YJR040W CBK1P53894 756 aa6.75□□□□□ -1.33
GEF1YJR040W ASI1P54074 624 aa6.75□□□□□ -1.33
GEF1YJR040W MAG2Q06436 670 aaKnown RBP6.75□□□□□ -1.33
GEF1YJR040W CSR1Q06705 408 aaKnown RBP6.75□□□□□ -1.33
GEF1YJR040W PHR1P05066 565 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
GEF1YJR040W SAM1P10659 382 aaKnown RBP6.75□□□□□ -1.33
GEF1YJR040W TIM23P32897 222 aa6.75□□□□□ -1.33
GEF1YJR040W BUD2P33314 1104 aa6.75□□□□□ -1.33
GEF1YJR040W SPP381P38282 291 aaPredicted RBP6.75□□□□□ -1.33
GEF1YJR040W LIN1P38852 340 aaPredicted RBP6.75□□□□□ -1.33
GEF1YJR040W CCT2P39076 527 aaKnown RBP6.75□□□□□ -1.33
GEF1YJR040W MXR1P40029 184 aa6.75□□□□□ -1.33
GEF1YJR040W ATG36P46983 293 aa6.75□□□□□ -1.33
GEF1YJR040W TMA22P47089 198 aaPredicted RBP6.75□□□□□ -1.33
GEF1YJR040W ARI1P53111 347 aaKnown RBP6.75□□□□□ -1.33
GEF1YJR040W YNL144CP53907 740 aa6.75□□□□□ -1.33
GEF1YJR040W AIM33Q04516 312 aa6.75□□□□□ -1.33
GEF1YJR040W SIL1Q08199 421 aa6.75□□□□□ -1.33
GEF1YJR040W GNT1Q12096 491 aa6.75□□□□□ -1.33
GEF1YJR040W ZRT2Q12436 422 aa6.75□□□□□ -1.33
GEF1YJR040W ILV1P00927 576 aaKnown RBP6.74□□□□□ -1.33
GEF1YJR040W YMR085WP0CF18 432 aa6.74□□□□□ -1.33
GEF1YJR040W TYR1P20049 452 aa6.74□□□□□ -1.33
GEF1YJR040W CDC48P25694 835 aaKnown RBP6.74□□□□□ -1.33
GEF1YJR040W HXT1P32465 570 aa6.74□□□□□ -1.33
GEF1YJR040W SMC1P32908 1225 aa6.74□□□□□ -1.33
GEF1YJR040W NIP100P33420 868 aa6.74□□□□□ -1.33
GEF1YJR040W VPS29P38759 282 aa6.74□□□□□ -1.33
GEF1YJR040W NDT80P38830 627 aa6.74□□□□□ -1.33
GEF1YJR040W MDJ2P42834 146 aa6.74□□□□□ -1.33
GEF1YJR040W GCN20P43535 752 aaKnown RBP6.74□□□□□ -1.33
GEF1YJR040W YFL034WP43564 1073 aa6.74□□□□□ -1.33
GEF1YJR040W DIG1Q03063 452 aaKnown RBP6.74□□□□□ -1.33
GEF1YJR040W SPC24Q04477 213 aa6.74□□□□□ -1.33
GEF1YJR040W YLR326WQ06170 240 aaKnown RBP6.74□□□□□ -1.33
GEF1YJR040W YLH47Q06493 454 aa6.74□□□□□ -1.33
GEF1YJR040W TSR1Q07381 788 aaKnown RBP6.74□□□□□ -1.33
GEF1YJR040W OCA6Q12454 224 aa6.74□□□□□ -1.33
GEF1YJR040W FKS1P38631 1876 aaKnown RBP6.74□□□□□ -1.33
GEF1YJR040W PRT1P06103 763 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W SSB1P11484 613 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W MIP1P15801 1254 aa6.73□□□□□ -1.33
GEF1YJR040W SUV3P32580 737 aa6.73□□□□□ -1.33
GEF1YJR040W KAP123P40069 1113 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W SSB2P40150 613 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W MMM1P41800 426 aa6.73□□□□□ -1.33
GEF1YJR040W YGR273CP53329 174 aa6.73□□□□□ -1.33
GEF1YJR040W SFB2P53953 876 aa6.73□□□□□ -1.33
GEF1YJR040W DUS3Q06053 668 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W WHI4Q07655 649 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W OSW1Q08692 278 aa6.73□□□□□ -1.33
GEF1YJR040W OXR1Q08952 273 aa6.73□□□□□ -1.33
GEF1YJR040W DAS2Q12084 232 aa6.73□□□□□ -1.33
GEF1YJR040W CHS5Q12114 671 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W SCJ1P25303 377 aa6.73□□□□□ -1.33
GEF1YJR040W NPL6P32832 435 aa6.73□□□□□ -1.33
GEF1YJR040W HEK2P38199 381 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
GEF1YJR040W AXL1P40851 1208 aa6.73□□□□□ -1.33
GEF1YJR040W GPD2P41911 440 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W UTP14Q04500 899 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W TAF9Q05027 157 aa6.73□□□□□ -1.33
GEF1YJR040W YLR225CQ05948 407 aaKnown RBP6.73□□□□□ -1.33
GEF1YJR040W GGA1Q06336 557 aa6.73□□□□□ -1.33
GEF1YJR040W TAL1P15019 335 aaKnown RBP6.72□□□□□ -1.33
GEF1YJR040W TKL1P23254 680 aaKnown RBP6.72□□□□□ -1.33
GEF1YJR040W RPC19P28000 142 aaKnown RBP6.72□□□□□ -1.33
GEF1YJR040W BRF1P29056 596 aa6.72□□□□□ -1.33
GEF1YJR040W RGT1P32862 1170 aa6.72□□□□□ -1.33
GEF1YJR040W IXR1P33417 597 aa6.72□□□□□ -1.33
GEF1YJR040W PPS1P38148 807 aa6.72□□□□□ -1.33
GEF1YJR040W YBR062CP38239 180 aa6.72□□□□□ -1.33
GEF1YJR040W ORC6P38826 435 aa6.72□□□□□ -1.33
GEF1YJR040W YNL320WP42840 284 aa6.72□□□□□ -1.33
GEF1YJR040W UBP6P43593 499 aaKnown RBP6.72□□□□□ -1.33
GEF1YJR040W SHE10P53075 577 aa6.72□□□□□ -1.33
GEF1YJR040W ORM1P53224 222 aa6.72□□□□□ -1.33
GEF1YJR040W GIR2Q03768 265 aaPredicted RBP6.72□□□□□ -1.33
GEF1YJR040W MPC54Q08550 464 aa6.72□□□□□ -1.33
GEF1YJR040W ERP3Q12403 225 aa6.72□□□□□ -1.33
GEF1YJR040W TY4B-PA0A0B7P3V8 1104 aa6.72□□□□□ -1.33
GEF1YJR040W SRD1P09007 221 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms