RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	GAT1	P43574	510 aa		2.64	□□□□□ -1.99
SCW11	YGL028C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.64	□□□□□ -1.99	not detected
SCW11	YGL028C	CDC11	P32458	415 aa		2.63	□□□□□ -1.99
SCW11	YGL028C	NGG1	P32494	702 aa		2.63	□□□□□ -1.99
SCW11	YGL028C	PZF1	P39933	429 aa		2.63	□□□□□ -1.99
SCW11	YGL028C	YJL163C	P46996	555 aa		2.63	□□□□□ -1.99
SCW11	YGL028C	AMA1	P50082	593 aa		2.63	□□□□□ -1.99
SCW11	YGL028C	ASI2	P53895	289 aa		2.63	□□□□□ -1.99
SCW11	YGL028C	ALD6	P54115	500 aa	Known RBP	2.63	□□□□□ -1.99
SCW11	YGL028C	MPH2	P0CD99	609 aa		2.62	□□□□□ -1.99
SCW11	YGL028C	YBR053C	P38235	358 aa		2.62	□□□□□ -1.99
SCW11	YGL028C	DUS1	P53759	423 aa	Known RBP	2.62	□□□□□ -1.99
SCW11	YGL028C	HAL9	Q12180	1030 aa		2.62	□□□□□ -1.99
SCW11	YGL028C	SCT1	P32784	759 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	HIS7	P33734	552 aa	Known RBP	2.61	□□□□□ -1.99
SCW11	YGL028C	SAK1	P38990	1142 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	YIR042C	P40586	236 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	PFD1	P46988	109 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	RIA1	P53893	1110 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	NRG1	Q03125	231 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	MUS81	Q04149	632 aa	Predicted RBP	2.61	□□□□□ -1.99
SCW11	YGL028C	UBX5	Q06682	500 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	FMP25	Q08023	583 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	IRC13	Q08630	104 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	ENV7	Q12003	364 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	YOR022C	Q12204	715 aa		2.61	□□□□□ -1.99
SCW11	YGL028C	MSD1	P15179	658 aa	Known RBP	2.6	□□□□□ -1.99
SCW11	YGL028C	DAL7	P21826	554 aa		2.6	□□□□□ -1.99
SCW11	YGL028C	CBR1	P38626	284 aa	Known RBP	2.6	□□□□□ -1.99
SCW11	YGL028C	SSY5	P47002	699 aa		2.6	□□□□□ -1.99
SCW11	YGL028C	NIT3	P49954	291 aa		2.6	□□□□□ -1.99
SCW11	YGL028C	NOG2	P53742	486 aa	Known RBP	2.6	□□□□□ -1.99
SCW11	YGL028C	YLR415C	O13578	112 aa		2.6	□□□□□ -1.99
SCW11	YGL028C	PRC1	P00729	532 aa		2.6	□□□□□ -1.99
SCW11	YGL028C	ORC2	P32833	620 aa		2.6	□□□□□ -1.99
SCW11	YGL028C	PET10	P36139	283 aa		2.6	□□□□□ -1.99
SCW11	YGL028C	GGA2	P38817	585 aa	Known RBP	2.6	□□□□□ -1.99
SCW11	YGL028C	UTP8	P53276	713 aa	Known RBP	2.6	□□□□□ -1.99
SCW11	YGL028C	EAF1	Q06337	982 aa		2.6	□□□□□ -1.99
SCW11	YGL028C	MRI1	Q06489	411 aa	Known RBP	2.6	□□□□□ -1.99
SCW11	YGL028C	HBN1	Q96VH4	193 aa		2.6	□□□□□ -1.99
SCW11	YGL028C	SPO11	P23179	398 aa		2.59	□□□□□ -1.99
SCW11	YGL028C	RGT1	P32862	1170 aa		2.59	□□□□□ -1.99
SCW11	YGL028C	SAP190	P36123	1033 aa		2.59	□□□□□ -1.99
SCW11	YGL028C	HSV2	P50079	448 aa	Predicted RBP	2.59	□□□□□ -1.99
SCW11	YGL028C	SSL2	Q00578	843 aa		2.59	□□□□□ -1.99
SCW11	YGL028C	APM1	Q00776	475 aa	Predicted RBP	2.59	□□□□□ -1.99
SCW11	YGL028C	RSC3	Q06639	885 aa		2.59	□□□□□ -1.99
SCW11	YGL028C	SPO75	Q07798	868 aa		2.59	□□□□□ -1.99
SCW11	YGL028C	LAT1	P12695	482 aa	Known RBP	2.58	□□□□□ -2
SCW11	YGL028C	GRX1	P25373	110 aa	Known RBP	2.58	□□□□□ -2
SCW11	YGL028C	YCL002C	P25565	263 aa		2.58	□□□□□ -2
SCW11	YGL028C	ARE1	P25628	610 aa		2.58	□□□□□ -2
SCW11	YGL028C	RPL8B	P29453	256 aa	Known RBP	2.58	□□□□□ -2
SCW11	YGL028C	PFA3	P42836	336 aa		2.58	□□□□□ -2
SCW11	YGL028C	TAD1	P53065	400 aa		2.58	□□□□□ -2
SCW11	YGL028C	ERP6	P53198	216 aa		2.58	□□□□□ -2
SCW11	YGL028C	LRS4	Q04087	347 aa	Known RBP	2.58	□□□□□ -2
SCW11	YGL028C	SGO1	Q08490	590 aa		2.58	□□□□□ -2
SCW11	YGL028C	TGL5	Q12043	749 aa		2.58	□□□□□ -2
SCW11	YGL028C	TOP3	P13099	656 aa		2.57	□□□□□ -2
SCW11	YGL028C	DMC1	P25453	334 aa		2.57	□□□□□ -2
SCW11	YGL028C	STB2	P46679	850 aa		2.57	□□□□□ -2
SCW11	YGL028C	DAM1	P53267	343 aa		2.57	□□□□□ -2
SCW11	YGL028C	RIM13	Q03792	727 aa		2.57	□□□□□ -2
SCW11	YGL028C	ASM4	Q05166	528 aa		2.57	□□□□□ -2
SCW11	YGL028C	WRS1	Q12109	432 aa	Known RBP	2.57	□□□□□ -2
SCW11	YGL028C	BCD1	P38772	366 aa		2.57	□□□□□ -2
SCW11	YGL028C	FMP52	P40008	231 aa		2.57	□□□□□ -2
SCW11	YGL028C	EMC3	P36039	253 aa		2.56	□□□□□ -2
SCW11	YGL028C	HOS4	P40480	1083 aa		2.56	□□□□□ -2
SCW11	YGL028C	UBC11	P52492	156 aa		2.56	□□□□□ -2
SCW11	YGL028C	TEL2	P53038	688 aa		2.56	□□□□□ -2
SCW11	YGL028C	NAN1	Q02931	896 aa	Known RBP	2.56	□□□□□ -2
SCW11	YGL028C	OSH2	Q12451	1283 aa		2.56	□□□□□ -2
SCW11	YGL028C	YJL206C	P39529	758 aa		2.55	□□□□□ -2
SCW11	YGL028C	GYP8	P43570	497 aa		2.55	□□□□□ -2
SCW11	YGL028C	UBP6	P43593	499 aa	Known RBP	2.55	□□□□□ -2
SCW11	YGL028C	MTR3	P48240	250 aa	Predicted RBP	2.55	□□□□□ -2
SCW11	YGL028C	BPL1	P48445	690 aa	Predicted RBP	2.55	□□□□□ -2
SCW11	YGL028C	YGR283C	P53336	341 aa	Predicted RBP	2.55	□□□□□ -2
SCW11	YGL028C	YDR514C	Q04408	483 aa		2.55	□□□□□ -2
SCW11	YGL028C	HSP60	P19882	572 aa	Known RBP	2.54	□□□□□ -2
SCW11	YGL028C	YBR259W	P38338	688 aa		2.54	□□□□□ -2
SCW11	YGL028C	SET5	P38890	526 aa	Known RBP	2.54	□□□□□ -2
SCW11	YGL028C	REV7	P38927	245 aa		2.54	□□□□□ -2
SCW11	YGL028C	SHR5	P41912	237 aa		2.54	□□□□□ -2
SCW11	YGL028C	SMX3	P54999	86 aa	Predicted RBP	2.54	□□□□□ -2
SCW11	YGL028C	THI21	Q08975	551 aa		2.54	□□□□□ -2
SCW11	YGL028C	RGT2	Q12300	763 aa		2.54	□□□□□ -2
SCW11	YGL028C	ATG11	Q12527	1178 aa		2.54	□□□□□ -2
SCW11	YGL028C	TOM70	P07213	617 aa	Known RBP	2.53	□□□□□ -2
SCW11	YGL028C	HOM2	P13663	365 aa	Known RBP	2.53	□□□□□ -2
SCW11	YGL028C	HIR1	P32479	840 aa		2.53	□□□□□ -2
SCW11	YGL028C	SIC1	P38634	284 aa		2.53	□□□□□ -2
SCW11	YGL028C	NDC80	P40460	691 aa		2.53	□□□□□ -2
SCW11	YGL028C	SNU71	P53207	620 aa	Known RBP	2.53	□□□□□ -2
SCW11	YGL028C	YAP1802	P53309	568 aa		2.53	□□□□□ -2
SCW11	YGL028C	SEG1	Q04279	960 aa		2.53	□□□□□ -2
SCW11	YGL028C	GAD1	Q04792	585 aa		2.53	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms