RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W HDA1P53973 706 aa5.94□□□□□ -1.46
UBC6YER100W YML131WQ03102 365 aa5.94□□□□□ -1.46
UBC6YER100W YHM2Q04013 314 aa5.94□□□□□ -1.46
UBC6YER100W THI21Q08975 551 aa5.94□□□□□ -1.46
UBC6YER100W PFK1P16861 987 aaKnown RBP5.93□□□□□ -1.46
UBC6YER100W HOP1P20050 605 aa5.93□□□□□ -1.46
UBC6YER100W YCL002CP25565 263 aa5.93□□□□□ -1.46
UBC6YER100W CYS3P31373 394 aaKnown RBP5.93□□□□□ -1.46
UBC6YER100W STE13P33894 931 aa5.93□□□□□ -1.46
UBC6YER100W NPY1P53164 384 aa5.93□□□□□ -1.46
UBC6YER100W NBA1Q08229 501 aaKnown RBP5.93□□□□□ -1.46
UBC6YER100W YPL277CQ08989 487 aa5.93□□□□□ -1.46
UBC6YER100W NOT3P06102 836 aaKnown RBP5.92□□□□□ -1.46
UBC6YER100W APA1P16550 321 aaKnown RBP5.92□□□□□ -1.46
UBC6YER100W PET309P32522 965 aaPredicted RBP5.92□□□□□ -1.46
UBC6YER100W SER1P33330 395 aaKnown RBP5.92□□□□□ -1.46
UBC6YER100W YKR051WP36142 418 aa5.92□□□□□ -1.46
UBC6YER100W SHR5P41912 237 aa5.92□□□□□ -1.46
UBC6YER100W RNR4P49723 345 aaKnown RBP5.92□□□□□ -1.46
UBC6YER100W YKR011CQ02209 353 aa5.92□□□□□ -1.46
UBC6YER100W VPS30Q02948 557 aa5.92□□□□□ -1.46
UBC6YER100W EAR1Q03212 550 aa5.92□□□□□ -1.46
UBC6YER100W GIR2Q03768 265 aaPredicted RBP5.92□□□□□ -1.46
UBC6YER100W RPN7Q06103 429 aaKnown RBP5.92□□□□□ -1.46
UBC6YER100W RSC58Q07979 502 aa5.92□□□□□ -1.46
UBC6YER100W DCS2Q12123 353 aa5.92□□□□□ -1.46
UBC6YER100W SVS1Q12254 260 aa5.92□□□□□ -1.46
UBC6YER100W YVC1Q12324 675 aa5.92□□□□□ -1.46
UBC6YER100W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.92□□□□□ -1.46not detected
UBC6YER100W RTP1Q12751 981 aa5.92□□□□□ -1.46
UBC6YER100W RPS21BQ3E754 87 aaKnown RBP5.92□□□□□ -1.46
UBC6YER100W RPS9AO13516 197 aaKnown RBP5.91□□□□□ -1.46
UBC6YER100W SWI6P09959 803 aa5.91□□□□□ -1.46
UBC6YER100W TYE7P33122 291 aaPredicted RBP5.91□□□□□ -1.46
UBC6YER100W YJR039WP47107 1121 aa5.91□□□□□ -1.46
UBC6YER100W PUS4P48567 403 aaKnown RBP5.91□□□□□ -1.46
UBC6YER100W RAI1P53063 387 aaKnown RBP5.91□□□□□ -1.46
UBC6YER100W HOL1P53389 586 aa5.91□□□□□ -1.46
UBC6YER100W SDH1Q00711 640 aa5.91□□□□□ -1.46
UBC6YER100W OPY2Q06810 360 aa5.91□□□□□ -1.46
UBC6YER100W RSB1Q08417 382 aa5.91□□□□□ -1.46
UBC6YER100W YOR059CQ08448 450 aaKnown RBP5.91□□□□□ -1.46
UBC6YER100W DPH6Q12429 685 aa5.91□□□□□ -1.46
UBC6YER100W MSM1P22438 575 aa5.9□□□□□ -1.46
UBC6YER100W SEC65P29478 273 aa5.9□□□□□ -1.46
UBC6YER100W MPE1P35728 441 aaKnown RBP5.9□□□□□ -1.46
UBC6YER100W SAP190P36123 1033 aa5.9□□□□□ -1.46
UBC6YER100W YFL052WP43551 465 aa5.9□□□□□ -1.46
UBC6YER100W ZIP2P53061 704 aa5.9□□□□□ -1.46
UBC6YER100W CAF120P53836 1060 aa5.9□□□□□ -1.46
UBC6YER100W ECM38Q05902 660 aaPredicted RBP5.9□□□□□ -1.46
UBC6YER100W YOL114CQ12322 202 aa5.9□□□□□ -1.46
UBC6YER100W YLR149CQ99296 730 aa5.9□□□□□ -1.46
UBC6YER100W RSC6P25632 483 aa5.89□□□□□ -1.47
UBC6YER100W TRK2P28584 889 aa5.89□□□□□ -1.47
UBC6YER100W NAM7P30771 971 aaKnown RBP5.89□□□□□ -1.47
UBC6YER100W MNN4P36044 1178 aa5.89□□□□□ -1.47
UBC6YER100W FAT1P38225 669 aa5.89□□□□□ -1.47
UBC6YER100W SSZ1P38788 538 aaKnown RBP5.89□□□□□ -1.47
UBC6YER100W RPT2P40327 437 aaKnown RBP5.89□□□□□ -1.47
UBC6YER100W PCL10P53124 433 aa5.89□□□□□ -1.47
UBC6YER100W CEG1Q01159 459 aaPredicted RBP5.89□□□□□ -1.47
UBC6YER100W TRS130Q03660 1102 aa5.89□□□□□ -1.47
UBC6YER100W SIZ1Q04195 904 aa5.89□□□□□ -1.47
UBC6YER100W HLR1Q04429 423 aa5.89□□□□□ -1.47
UBC6YER100W ENT2Q05785 613 aa5.89□□□□□ -1.47
UBC6YER100W XYL2Q07993 356 aa5.89□□□□□ -1.47
UBC6YER100W SSP2Q08646 371 aa5.89□□□□□ -1.47
UBC6YER100W PRC1P00729 532 aa5.88□□□□□ -1.47
UBC6YER100W AI3P03877 415 aa5.88□□□□□ -1.47
UBC6YER100W FBP1P09201 348 aa5.88□□□□□ -1.47
UBC6YER100W HCA4P20448 770 aaKnown RBP5.88□□□□□ -1.47
UBC6YER100W FLR1P38124 548 aa5.88□□□□□ -1.47
UBC6YER100W BEM4P39011 633 aa5.88□□□□□ -1.47
UBC6YER100W CEP3P40969 608 aa5.88□□□□□ -1.47
UBC6YER100W BFA1P47113 574 aa5.88□□□□□ -1.47
UBC6YER100W CRR1Q05790 422 aa5.88□□□□□ -1.47
UBC6YER100W RFC5P38251 354 aa5.87□□□□□ -1.47
UBC6YER100W SRP68P38687 599 aaKnown RBP5.87□□□□□ -1.47
UBC6YER100W MMM1P41800 426 aa5.87□□□□□ -1.47
UBC6YER100W CIT3P43635 486 aa5.87□□□□□ -1.47
UBC6YER100W IML2P47031 731 aa5.87□□□□□ -1.47
UBC6YER100W ASK10P48361 1146 aa5.87□□□□□ -1.47
UBC6YER100W BUD9P53226 547 aa5.87□□□□□ -1.47
UBC6YER100W TEP1P53916 434 aa5.87□□□□□ -1.47
UBC6YER100W CIA1Q05583 330 aa5.87□□□□□ -1.47
UBC6YER100W NEW1Q08972 1196 aaKnown RBP5.87□□□□□ -1.47
UBC6YER100W YOR022CQ12204 715 aa5.87□□□□□ -1.47
UBC6YER100W ARP7Q12406 477 aa5.87□□□□□ -1.47
UBC6YER100W NSI1Q12457 570 aa5.87□□□□□ -1.47
UBC6YER100W KCS1Q12494 1050 aa5.87□□□□□ -1.47
UBC6YER100W HSF1P10961 833 aa5.86□□□□□ -1.47
UBC6YER100W ATP12P22135 325 aa5.86□□□□□ -1.47
UBC6YER100W GFD2P25370 566 aaKnown RBP5.86□□□□□ -1.47
UBC6YER100W IMP2'P32351 346 aa5.86□□□□□ -1.47
UBC6YER100W MDM1Q01846 1127 aa5.86□□□□□ -1.47
UBC6YER100W MSC2Q03455 724 aa5.86□□□□□ -1.47
UBC6YER100W URN1Q06525 465 aaKnown RBP5.86□□□□□ -1.47
UBC6YER100W HAL9Q12180 1030 aa5.86□□□□□ -1.47
UBC6YER100W Q0142Q9ZZW4 58 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms