RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A YKE2P52553 114 aa2.21□□□□□ -2.06
SDH6YDR379C-A YLR225CQ05948 407 aaKnown RBP2.21□□□□□ -2.06
SDH6YDR379C-A DUS3Q06053 668 aaKnown RBP2.21□□□□□ -2.06
SDH6YDR379C-A EAF1Q06337 982 aa2.21□□□□□ -2.06
SDH6YDR379C-A SNF7P39929 240 aaKnown RBP2.2□□□□□ -2.06
SDH6YDR379C-A CEP3P40969 608 aa2.2□□□□□ -2.06
SDH6YDR379C-A SSA1P10591 642 aaKnown RBP2.19□□□□□ -2.06
SDH6YDR379C-A RFA1P22336 621 aaKnown RBP2.19□□□□□ -2.06
SDH6YDR379C-A PSA1P41940 361 aaKnown RBP2.19□□□□□ -2.06
SDH6YDR379C-A YKR011CQ02209 353 aa2.19□□□□□ -2.06
SDH6YDR379C-A EEB1Q02891 456 aa2.19□□□□□ -2.06
SDH6YDR379C-A TGL5Q12043 749 aa2.19□□□□□ -2.06
SDH6YDR379C-A PYC1P11154 1178 aaKnown RBP2.18□□□□□ -2.06
SDH6YDR379C-A MCM2P29469 868 aa2.18□□□□□ -2.06
SDH6YDR379C-A CCR4P31384 837 aaKnown RBP2.18□□□□□ -2.06
SDH6YDR379C-A PIN4P34217 668 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
SDH6YDR379C-A GCS1P35197 352 aa2.18□□□□□ -2.06
SDH6YDR379C-A MET30P39014 640 aa2.18□□□□□ -2.06
SDH6YDR379C-A MLH3Q12083 715 aa2.18□□□□□ -2.06
SDH6YDR379C-A YLR415CO13578 112 aa2.17□□□□□ -2.06
SDH6YDR379C-A NPP1P25353 742 aa2.17□□□□□ -2.06
SDH6YDR379C-A MUS81Q04149 632 aaPredicted RBP2.17□□□□□ -2.06
SDH6YDR379C-A SIR3P06701 978 aa2.16□□□□□ -2.06
SDH6YDR379C-A MBR1P23493 339 aa2.16□□□□□ -2.06
SDH6YDR379C-A STM1P39015 273 aaKnown RBP2.16□□□□□ -2.06
SDH6YDR379C-A PZF1P39933 429 aa2.16□□□□□ -2.06
SDH6YDR379C-A TAX4P47030 604 aa2.16□□□□□ -2.06
SDH6YDR379C-A ATG4P53867 494 aa2.16□□□□□ -2.06
SDH6YDR379C-A HDA1P53973 706 aa2.16□□□□□ -2.06
SDH6YDR379C-A SPO20Q04359 397 aa2.16□□□□□ -2.06
SDH6YDR379C-A SCW10Q04951 389 aa2.16□□□□□ -2.06
SDH6YDR379C-A YKL033W-AQ86ZR7 236 aa2.16□□□□□ -2.06
SDH6YDR379C-A ADE5,7P07244 802 aaKnown RBP2.15□□□□□ -2.07
SDH6YDR379C-A ATG11Q12527 1178 aa2.15□□□□□ -2.07
SDH6YDR379C-A DUT1P33317 147 aa2.14□□□□□ -2.07
SDH6YDR379C-A PXL1P36166 706 aa2.14□□□□□ -2.07
SDH6YDR379C-A CCT5P40413 562 aaKnown RBP2.14□□□□□ -2.07
SDH6YDR379C-A ESC2Q06340 456 aa2.14□□□□□ -2.07
SDH6YDR379C-A RPS9AO13516 197 aaKnown RBP2.13□□□□□ -2.07
SDH6YDR379C-A STE12P13574 688 aa2.13□□□□□ -2.07
SDH6YDR379C-A SFB3P38810 929 aa2.13□□□□□ -2.07
SDH6YDR379C-A SAK1P38990 1142 aa2.13□□□□□ -2.07
SDH6YDR379C-A MBP1P39678 833 aa2.13□□□□□ -2.07
SDH6YDR379C-A BAP3P41815 604 aa2.13□□□□□ -2.07
SDH6YDR379C-A PAN2P53010 1115 aaPredicted RBP2.13□□□□□ -2.07
SDH6YDR379C-A SPR28Q04921 423 aa2.13□□□□□ -2.07
SDH6YDR379C-A SAT4P25333 603 aaKnown RBP2.12□□□□□ -2.07
SDH6YDR379C-A URA1P28272 314 aaPredicted RBP2.12□□□□□ -2.07
SDH6YDR379C-A ECM32P32644 1121 aaKnown RBP2.12□□□□□ -2.07
SDH6YDR379C-A NDD1Q08887 554 aa2.12□□□□□ -2.07
SDH6YDR379C-A PPH3P32345 308 aa2.11□□□□□ -2.07
SDH6YDR379C-A CCT3P39077 534 aaKnown RBP2.11□□□□□ -2.07
SDH6YDR379C-A PFA3P42836 336 aa2.11□□□□□ -2.07
SDH6YDR379C-A LSC1P53598 329 aaKnown RBP2.11□□□□□ -2.07
SDH6YDR379C-A ESF1Q06344 628 aaKnown RBP2.11□□□□□ -2.07
SDH6YDR379C-A YMC1P32331 307 aa2.1□□□□□ -2.07
SDH6YDR379C-A EUG1P32474 517 aa2.1□□□□□ -2.07
SDH6YDR379C-A UGP1P32861 499 aaKnown RBP2.1□□□□□ -2.07
SDH6YDR379C-A AFR1P33304 620 aa2.1□□□□□ -2.07
SDH6YDR379C-A GUS1P46655 708 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SDH6YDR379C-A ENP2P48234 707 aaKnown RBP2.1□□□□□ -2.07
SDH6YDR379C-A DUS1P53759 423 aaKnown RBP2.1□□□□□ -2.07
SDH6YDR379C-A YOR111WQ99210 232 aa2.1□□□□□ -2.07
SDH6YDR379C-A ADE8P04161 214 aa2.09□□□□□ -2.07
SDH6YDR379C-A FUB1P25659 250 aa2.09□□□□□ -2.07
SDH6YDR379C-A MVD1P32377 396 aaKnown RBP2.09□□□□□ -2.07
SDH6YDR379C-A HOT13P36078 116 aa2.09□□□□□ -2.07
SDH6YDR379C-A GMH1P36125 273 aa2.09□□□□□ -2.07
SDH6YDR379C-A SCW4P53334 386 aaKnown RBP2.09□□□□□ -2.07
SDH6YDR379C-A HFD1Q04458 532 aa2.09□□□□□ -2.07
SDH6YDR379C-A YDR306CQ06640 478 aa2.09□□□□□ -2.07
SDH6YDR379C-A HAL9Q12180 1030 aa2.09□□□□□ -2.07
SDH6YDR379C-A CDC34P14682 295 aa2.08□□□□□ -2.08
SDH6YDR379C-A KCC4P25389 1037 aa2.08□□□□□ -2.08
SDH6YDR379C-A ABD1P32783 436 aaPredicted RBP2.08□□□□□ -2.08
SDH6YDR379C-A PHO11P35842 467 aa2.08□□□□□ -2.08
SDH6YDR379C-A PHO12P38693 467 aa2.08□□□□□ -2.08
SDH6YDR379C-A YAT2P40017 923 aa2.08□□□□□ -2.08
SDH6YDR379C-A SSY5P47002 699 aa2.08□□□□□ -2.08
SDH6YDR379C-A ORM2Q06144 216 aa2.08□□□□□ -2.08
SDH6YDR379C-A SEC20P28791 383 aa2.07□□□□□ -2.08
SDH6YDR379C-A YRO2P38079 344 aa2.07□□□□□ -2.08
SDH6YDR379C-A SDS24P38314 527 aa2.07□□□□□ -2.08
SDH6YDR379C-A SIC1P38634 284 aa2.07□□□□□ -2.08
SDH6YDR379C-A SSF1P38789 453 aaPredicted RBP2.07□□□□□ -2.08
SDH6YDR379C-A FHN1P53279 174 aa2.07□□□□□ -2.08
SDH6YDR379C-A TEX1P53851 422 aaKnown RBP2.07□□□□□ -2.08
SDH6YDR379C-A GAD1Q04792 585 aa2.07□□□□□ -2.08
SDH6YDR379C-A ULA1Q12059 462 aa2.07□□□□□ -2.08
SDH6YDR379C-A PMC1P38929 1173 aaPredicted RBP2.06□□□□□ -2.08
SDH6YDR379C-A JSN1P47135 1091 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
SDH6YDR379C-A NUP53Q03790 475 aa2.06□□□□□ -2.08
SDH6YDR379C-A AAR2P32357 355 aaPredicted RBP2.05□□□□□ -2.08
SDH6YDR379C-A MGE1P38523 228 aa2.05□□□□□ -2.08
SDH6YDR379C-A FMO1P38866 432 aa2.05□□□□□ -2.08
SDH6YDR379C-A SPC98P53540 846 aa2.05□□□□□ -2.08
SDH6YDR379C-A USV1Q12132 391 aa2.05□□□□□ -2.08
SDH6YDR379C-A CYS3P31373 394 aaKnown RBP2.04□□□□□ -2.08
SDH6YDR379C-A YMC2P38087 329 aa2.04□□□□□ -2.08
SDH6YDR379C-A ERT1P38140 529 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms