RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W BNA2P47125 453 aa2.4□□□□□ -2.03
SIR4YDR227W SPH1Q06160 661 aa2.4□□□□□ -2.03
SIR4YDR227W DCS2Q12123 353 aa2.4□□□□□ -2.03
SIR4YDR227W SEC3P33332 1336 aaKnown RBP2.4□□□□□ -2.03
SIR4YDR227W RTC1Q08281 1341 aa2.4□□□□□ -2.03
SIR4YDR227W MSD1P15179 658 aaKnown RBP2.39□□□□□ -2.03
SIR4YDR227W MSS116P15424 664 aaKnown RBP2.39□□□□□ -2.03
SIR4YDR227W MCM3P24279 971 aaKnown RBP2.39□□□□□ -2.03
SIR4YDR227W RME1P32338 300 aaKnown RBP2.39□□□□□ -2.03
SIR4YDR227W CSE4P36012 229 aa2.39□□□□□ -2.03
SIR4YDR227W CIC1P38779 376 aaKnown RBP2.39□□□□□ -2.03
SIR4YDR227W BUD6P41697 788 aa2.39□□□□□ -2.03
SIR4YDR227W RRP46P53256 223 aaPredicted RBP2.39□□□□□ -2.03
SIR4YDR227W SPO1P53541 631 aa2.39□□□□□ -2.03
SIR4YDR227W SRC1Q03707 834 aa2.39□□□□□ -2.03
SIR4YDR227W AIM32Q04689 311 aa2.39□□□□□ -2.03
SIR4YDR227W MRX10Q05648 414 aa2.39□□□□□ -2.03
SIR4YDR227W PIN2Q12057 282 aa2.39□□□□□ -2.03
SIR4YDR227W GAL1P04385 528 aa2.39□□□□□ -2.03
SIR4YDR227W TEC1P18412 486 aa2.39□□□□□ -2.03
SIR4YDR227W PRE8P23639 250 aa2.39□□□□□ -2.03
SIR4YDR227W LOT5P34234 306 aa2.39□□□□□ -2.03
SIR4YDR227W BYE1P36106 594 aa2.39□□□□□ -2.03
SIR4YDR227W PAN5P38787 379 aa2.39□□□□□ -2.03
SIR4YDR227W YJL070CP40361 888 aa2.39□□□□□ -2.03
SIR4YDR227W BIO5P53744 561 aaKnown RBP2.39□□□□□ -2.03
SIR4YDR227W NCS2P53923 493 aaPredicted RBP2.39□□□□□ -2.03
SIR4YDR227W YPL062WQ02781 134 aa2.39□□□□□ -2.03
SIR4YDR227W PNG1Q02890 363 aa2.39□□□□□ -2.03
SIR4YDR227W RPN4Q03465 531 aa2.39□□□□□ -2.03
SIR4YDR227W VPS13Q07878 3144 aa2.39□□□□□ -2.03
SIR4YDR227W CET1O13297 549 aaPredicted RBP2.39□□□□□ -2.03
SIR4YDR227W LEU2P04173 364 aaPredicted RBP2.39□□□□□ -2.03
SIR4YDR227W CAN1P04817 590 aa2.39□□□□□ -2.03
SIR4YDR227W SRD1P09007 221 aa2.39□□□□□ -2.03
SIR4YDR227W PTP2P29461 750 aa2.39□□□□□ -2.03
SIR4YDR227W PPX1P38698 397 aa2.39□□□□□ -2.03
SIR4YDR227W ROK1P45818 564 aaPredicted RBP2.39□□□□□ -2.03
SIR4YDR227W YJL049WP47048 450 aa2.39□□□□□ -2.03
SIR4YDR227W ENT3P47160 408 aa2.39□□□□□ -2.03
SIR4YDR227W FOL2P51601 243 aaKnown RBP2.39□□□□□ -2.03
SIR4YDR227W ARP9Q05123 467 aa2.39□□□□□ -2.03
SIR4YDR227W CRR1Q05790 422 aa2.39□□□□□ -2.03
SIR4YDR227W IRC10Q08118 586 aa2.39□□□□□ -2.03
SIR4YDR227W INP54Q08227 384 aaKnown RBP2.39□□□□□ -2.03
SIR4YDR227W RED1P14291 827 aa2.38□□□□□ -2.03
SIR4YDR227W PRO3P32263 286 aaKnown RBP2.38□□□□□ -2.03
SIR4YDR227W ANP1P32629 500 aa2.38□□□□□ -2.03
SIR4YDR227W RER2P35196 286 aa2.38□□□□□ -2.03
SIR4YDR227W HSM3P38348 480 aa2.38□□□□□ -2.03
SIR4YDR227W KSP1P38691 1029 aaKnown RBP2.38□□□□□ -2.03
SIR4YDR227W ATG3P40344 310 aa2.38□□□□□ -2.03
SIR4YDR227W VPS4P52917 437 aa2.38□□□□□ -2.03
SIR4YDR227W THI22Q06490 572 aa2.38□□□□□ -2.03
SIR4YDR227W FLO1P32768 1537 aa2.38□□□□□ -2.03
SIR4YDR227W NUC1P08466 329 aa2.38□□□□□ -2.03
SIR4YDR227W CLB5P30283 435 aa2.38□□□□□ -2.03
SIR4YDR227W SEG2P34250 1132 aa2.38□□□□□ -2.03
SIR4YDR227W RGD1P38339 666 aa2.38□□□□□ -2.03
SIR4YDR227W RRP8P38961 392 aaKnown RBP2.38□□□□□ -2.03
SIR4YDR227W YDR090CQ03193 310 aa2.38□□□□□ -2.03
SIR4YDR227W YMR265CQ03508 461 aaKnown RBP2.38□□□□□ -2.03
SIR4YDR227W DPH6Q12429 685 aa2.38□□□□□ -2.03
SIR4YDR227W CEX1Q12453 761 aa2.38□□□□□ -2.03
SIR4YDR227W RPO41P13433 1351 aaKnown RBP2.38□□□□□ -2.03
SIR4YDR227W RGR1P19263 1082 aa2.38□□□□□ -2.03
SIR4YDR227W YBR238CP38330 731 aaKnown RBP2.38□□□□□ -2.03
SIR4YDR227W UTP7P40055 554 aaKnown RBP2.38□□□□□ -2.03
SIR4YDR227W RTR1P40084 226 aaPredicted RBP2.38□□□□□ -2.03
SIR4YDR227W ASG1P40467 964 aa2.38□□□□□ -2.03
SIR4YDR227W GYP7P48365 746 aa2.38□□□□□ -2.03
SIR4YDR227W TRM44Q02648 567 aaKnown RBP2.38□□□□□ -2.03
SIR4YDR227W YML053CQ04978 212 aa2.38□□□□□ -2.03
SIR4YDR227W ECM38Q05902 660 aaPredicted RBP2.38□□□□□ -2.03
SIR4YDR227W PIG1Q06216 648 aa2.38□□□□□ -2.03
SIR4YDR227W NSE1Q07913 336 aa2.38□□□□□ -2.03
SIR4YDR227W GSY1P23337 708 aa2.37□□□□□ -2.03
SIR4YDR227W MUD2P36084 527 aaKnown RBP2.37□□□□□ -2.03
SIR4YDR227W FTH1P38310 465 aa2.37□□□□□ -2.03
SIR4YDR227W HSE1P38753 452 aa2.37□□□□□ -2.03
SIR4YDR227W GDI1P39958 451 aaKnown RBP2.37□□□□□ -2.03
SIR4YDR227W FAF1P40546 346 aaPredicted RBP2.37□□□□□ -2.03
SIR4YDR227W ACF4P47129 309 aa2.37□□□□□ -2.03
SIR4YDR227W OGG1P53397 376 aaPredicted RBP2.37□□□□□ -2.03
SIR4YDR227W BUL2Q03758 920 aaKnown RBP2.37□□□□□ -2.03
SIR4YDR227W YLR287CQ05881 355 aa2.37□□□□□ -2.03
SIR4YDR227W BLS1Q06071 122 aa2.37□□□□□ -2.03
SIR4YDR227W ARV1Q06541 321 aa2.37□□□□□ -2.03
SIR4YDR227W ARR2Q06597 130 aa2.37□□□□□ -2.03
SIR4YDR227W YOL087CQ99247 1116 aa2.37□□□□□ -2.03
SIR4YDR227W RGP1P16664 663 aa2.37□□□□□ -2.03
SIR4YDR227W AMS1P22855 1083 aa2.37□□□□□ -2.03
SIR4YDR227W NPP1P25353 742 aa2.37□□□□□ -2.03
SIR4YDR227W KCC4P25389 1037 aa2.37□□□□□ -2.03
SIR4YDR227W AAD3P25612 363 aa2.37□□□□□ -2.03
SIR4YDR227W URA1P28272 314 aaPredicted RBP2.37□□□□□ -2.03
SIR4YDR227W GUT2P32191 649 aa2.37□□□□□ -2.03
SIR4YDR227W PLC1P32383 869 aa2.37□□□□□ -2.03
SIR4YDR227W UGA4P32837 571 aa2.37□□□□□ -2.03
SIR4YDR227W YRO2P38079 344 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms