RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	NPC2	Q12408	173 aa		6.06	□□□□□ -1.44
RPC53	YDL150W	LAS17	Q12446	633 aa		6.06	□□□□□ -1.44
RPC53	YDL150W	TAD3	Q9URQ3	322 aa		6.06	□□□□□ -1.44
RPC53	YDL150W	SRP40	P32583	406 aa	Predicted RBP	6.05	□□□□□ -1.44
RPC53	YDL150W	TSL1	P38427	1098 aa	Known RBP	6.05	□□□□□ -1.44
RPC53	YDL150W	NSE3	Q05541	303 aa		6.05	□□□□□ -1.44
RPC53	YDL150W	PFK1	P16861	987 aa	Known RBP	6.04	□□□□□ -1.44
RPC53	YDL150W	YER158C	P40095	573 aa		6.04	□□□□□ -1.44
RPC53	YDL150W	SCT1	P32784	759 aa		6.03	□□□□□ -1.44
RPC53	YDL150W	AFR1	P33304	620 aa		6.03	□□□□□ -1.44
RPC53	YDL150W	SIT1	P39980	628 aa		6.03	□□□□□ -1.44
RPC53	YDL150W	IRR1	P40541	1150 aa		6.03	□□□□□ -1.44
RPC53	YDL150W	WHI4	Q07655	649 aa	Known RBP	6.03	□□□□□ -1.44
RPC53	YDL150W	CDC53	Q12018	815 aa	Known RBP	6.03	□□□□□ -1.44
RPC53	YDL150W	UPC2	Q12151	913 aa		6.03	□□□□□ -1.44
RPC53	YDL150W	YOR131C	Q12486	218 aa		6.03	□□□□□ -1.44
RPC53	YDL150W	HRR25	P29295	494 aa	Known RBP	6.02	□□□□□ -1.45
RPC53	YDL150W	STE14	P32584	239 aa		6.02	□□□□□ -1.45
RPC53	YDL150W	PBY1	P38254	753 aa		6.02	□□□□□ -1.45
RPC53	YDL150W	OSW7	P43611	510 aa		6.02	□□□□□ -1.45
RPC53	YDL150W	BUL1	P48524	976 aa		6.02	□□□□□ -1.45
RPC53	YDL150W	BDF2	Q07442	638 aa		6.02	□□□□□ -1.45
RPC53	YDL150W	SPO75	Q07798	868 aa		6.02	□□□□□ -1.45
RPC53	YDL150W	PDR5	P33302	1511 aa	Known RBP	6.02	□□□□□ -1.45
RPC53	YDL150W	RAD4	P14736	754 aa		6.01	□□□□□ -1.45
RPC53	YDL150W	NPP1	P25353	742 aa		6.01	□□□□□ -1.45
RPC53	YDL150W	KAR4	P25583	335 aa		6.01	□□□□□ -1.45
RPC53	YDL150W	CDC48	P25694	835 aa	Known RBP	6.01	□□□□□ -1.45
RPC53	YDL150W	YKL091C	P33324	310 aa	Known RBP	6.01	□□□□□ -1.45
RPC53	YDL150W	RAI1	P53063	387 aa	Known RBP	6.01	□□□□□ -1.45
RPC53	YDL150W	RPN4	Q03465	531 aa		6.01	□□□□□ -1.45
RPC53	YDL150W	BCK1	Q01389	1478 aa		6.01	□□□□□ -1.45
RPC53	YDL150W	RAD53	P22216	821 aa		6	□□□□□ -1.45
RPC53	YDL150W	YDR306C	Q06640	478 aa		6	□□□□□ -1.45
RPC53	YDL150W	AIM39	Q08223	395 aa		6	□□□□□ -1.45
RPC53	YDL150W	OSH2	Q12451	1283 aa		6	□□□□□ -1.45
RPC53	YDL150W	PDR11	P40550	1411 aa		5.99	□□□□□ -1.45
RPC53	YDL150W	FBP1	P09201	348 aa		5.99	□□□□□ -1.45
RPC53	YDL150W	PRP9	P19736	530 aa	Known RBP	5.99	□□□□□ -1.45
RPC53	YDL150W	TIM54	P47045	478 aa		5.99	□□□□□ -1.45
RPC53	YDL150W	BUL2	Q03758	920 aa	Known RBP	5.99	□□□□□ -1.45
RPC53	YDL150W	KRE5	P22023	1365 aa		5.98	□□□□□ -1.45
RPC53	YDL150W	YBR184W	P38299	523 aa		5.98	□□□□□ -1.45
RPC53	YDL150W	HUL5	P53119	910 aa		5.98	□□□□□ -1.45
RPC53	YDL150W	CFT1	Q06632	1357 aa	Known RBP	5.97	□□□□□ -1.45
RPC53	YDL150W	ADE8	P04161	214 aa		5.97	□□□□□ -1.45
RPC53	YDL150W	PPH3	P32345	308 aa		5.97	□□□□□ -1.45
RPC53	YDL150W	STE5	P32917	917 aa		5.97	□□□□□ -1.45
RPC53	YDL150W	ERP6	P53198	216 aa		5.97	□□□□□ -1.45
RPC53	YDL150W	RIA1	P53893	1110 aa		5.97	□□□□□ -1.45
RPC53	YDL150W	YPR196W	Q06595	470 aa		5.97	□□□□□ -1.45
RPC53	YDL150W	NOT3	P06102	836 aa	Known RBP	5.96	□□□□□ -1.46
RPC53	YDL150W	EFT1	P32324	842 aa	Known RBP	5.96	□□□□□ -1.46
RPC53	YDL150W	STE13	P33894	931 aa		5.96	□□□□□ -1.46
RPC53	YDL150W	OAR1	P35731	278 aa		5.96	□□□□□ -1.46
RPC53	YDL150W	NMD2	P38798	1089 aa	Known RBP	5.96	□□□□□ -1.46
RPC53	YDL150W	TPO2	P53283	614 aa		5.96	□□□□□ -1.46
RPC53	YDL150W	YNR029C	P53729	429 aa	Known RBP	5.96	□□□□□ -1.46
RPC53	YDL150W	SLU7	Q02775	382 aa	Known RBP	5.96	□□□□□ -1.46
RPC53	YDL150W	FMP25	Q08023	583 aa		5.96	□□□□□ -1.46
RPC53	YDL150W	ENT1	Q12518	454 aa		5.96	□□□□□ -1.46
RPC53	YDL150W	HSP60	P19882	572 aa	Known RBP	5.95	□□□□□ -1.46
RPC53	YDL150W	SED4	P25365	1065 aa		5.95	□□□□□ -1.46
RPC53	YDL150W	HBS1	P32769	611 aa	Known RBP	5.95	□□□□□ -1.46
RPC53	YDL150W	GGA2	P38817	585 aa	Known RBP	5.95	□□□□□ -1.46
RPC53	YDL150W	PFD1	P46988	109 aa		5.95	□□□□□ -1.46
RPC53	YDL150W	FLC1	Q08967	793 aa		5.95	□□□□□ -1.46
RPC53	YDL150W	TRP4	P07285	380 aa	Predicted RBP	5.94	□□□□□ -1.46
RPC53	YDL150W	RPL8B	P29453	256 aa	Known RBP	5.94	□□□□□ -1.46
RPC53	YDL150W	AAR2	P32357	355 aa	Predicted RBP	5.94	□□□□□ -1.46
RPC53	YDL150W	KTR4	P38131	464 aa		5.94	□□□□□ -1.46
RPC53	YDL150W	YHR020W	P38708	688 aa	Known RBP	5.94	□□□□□ -1.46
RPC53	YDL150W	CHZ1	P40019	153 aa	Predicted RBP	5.94	□□□□□ -1.46
RPC53	YDL150W	YGR125W	P53273	1036 aa		5.94	□□□□□ -1.46
RPC53	YDL150W	UTP8	P53276	713 aa	Known RBP	5.94	□□□□□ -1.46
RPC53	YDL150W	ERG5	P54781	538 aa		5.94	□□□□□ -1.46
RPC53	YDL150W	EAF1	Q06337	982 aa		5.94	□□□□□ -1.46
RPC53	YDL150W	GAL11	P19659	1081 aa		5.93	□□□□□ -1.46
RPC53	YDL150W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	5.93	□□□□□ -1.46	not detected
RPC53	YDL150W	MOH1	P38191	138 aa		5.93	□□□□□ -1.46
RPC53	YDL150W	BUD6	P41697	788 aa		5.93	□□□□□ -1.46
RPC53	YDL150W	CCM1	P48237	864 aa	Predicted RBP	5.93	□□□□□ -1.46
RPC53	YDL150W	IMH1	Q06704	911 aa	Known RBP	5.93	□□□□□ -1.46
RPC53	YDL150W	YLR040C	Q07988	224 aa		5.93	□□□□□ -1.46
RPC53	YDL150W	ARE1	P25628	610 aa		5.92	□□□□□ -1.46
RPC53	YDL150W	YRO2	P38079	344 aa		5.92	□□□□□ -1.46
RPC53	YDL150W	HUL4	P40985	892 aa		5.92	□□□□□ -1.46
RPC53	YDL150W	PPM2	Q08282	695 aa		5.92	□□□□□ -1.46
RPC53	YDL150W	CIT1	P00890	479 aa		5.91	□□□□□ -1.46
RPC53	YDL150W	CIT2	P08679	460 aa		5.91	□□□□□ -1.46
RPC53	YDL150W	CDC11	P32458	415 aa		5.91	□□□□□ -1.46
RPC53	YDL150W	RRP14	P36080	434 aa	Known RBP	5.91	□□□□□ -1.46
RPC53	YDL150W	SDP1	P40479	209 aa		5.91	□□□□□ -1.46
RPC53	YDL150W	ALR2	P43553	858 aa		5.91	□□□□□ -1.46
RPC53	YDL150W	LCD1	Q04377	747 aa		5.91	□□□□□ -1.46
RPC53	YDL150W	SSL1	Q04673	461 aa	Predicted RBP	5.91	□□□□□ -1.46
RPC53	YDL150W	YOL073C	Q08232	322 aa		5.91	□□□□□ -1.46
RPC53	YDL150W	CTF8	P38877	133 aa		5.9	□□□□□ -1.46
RPC53	YDL150W	RSP5	P39940	809 aa	Known RBP	5.9	□□□□□ -1.46
RPC53	YDL150W	TOK1	P40310	691 aa		5.9	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms