RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W HIS2P38635 335 aa8.36□□□□□ -1.07
NDE2YDL085W YHL049CP38722 271 aa8.36□□□□□ -1.07
NDE2YDL085W YEL075CP39972 122 aa8.36□□□□□ -1.07
NDE2YDL085W LCP5P40079 357 aaPredicted RBP8.36□□□□□ -1.07
NDE2YDL085W YER189WP40104 122 aa8.36□□□□□ -1.07
NDE2YDL085W YFL064CP43540 174 aa8.36□□□□□ -1.07
NDE2YDL085W YJL007CP47080 104 aa8.36□□□□□ -1.07
NDE2YDL085W YNL011CP53980 444 aa8.36□□□□□ -1.07
NDE2YDL085W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
NDE2YDL085W TAF10Q12030 206 aa8.36□□□□□ -1.07
NDE2YDL085W YDL206WQ12424 762 aa8.36□□□□□ -1.07
NDE2YDL085W YBL111CQ3E7Y5 667 aa8.36□□□□□ -1.07
NDE2YDL085W YLR278CQ05854 1341 aa8.35□□□□□ -1.07
NDE2YDL085W PYC1P11154 1178 aaKnown RBP8.35□□□□□ -1.07
NDE2YDL085W VMA2P16140 517 aaKnown RBP8.35□□□□□ -1.07
NDE2YDL085W PRP9P19736 530 aaKnown RBP8.35□□□□□ -1.07
NDE2YDL085W SSD1P24276 1250 aaKnown RBP RIP-Chip data8.35□□□□□ -1.07not detected
NDE2YDL085W TFC4P33339 1025 aa8.35□□□□□ -1.07
NDE2YDL085W RPC37P36121 282 aa8.35□□□□□ -1.07
NDE2YDL085W TRZ1P36159 838 aaPredicted RBP8.35□□□□□ -1.07
NDE2YDL085W RIO2P40160 425 aaKnown RBP8.35□□□□□ -1.07
NDE2YDL085W YTA12P40341 825 aa8.35□□□□□ -1.07
NDE2YDL085W SAP185P40856 1058 aa8.35□□□□□ -1.07
NDE2YDL085W VPS53P47061 822 aa8.35□□□□□ -1.07
NDE2YDL085W MDR1P53258 950 aa8.35□□□□□ -1.07
NDE2YDL085W RPA49Q01080 415 aaPredicted RBP8.35□□□□□ -1.07
NDE2YDL085W MTG1Q03151 367 aaPredicted RBP8.35□□□□□ -1.07
NDE2YDL085W ATG16Q03818 150 aa8.35□□□□□ -1.07
NDE2YDL085W DUS3Q06053 668 aaKnown RBP8.35□□□□□ -1.07
NDE2YDL085W NOC3Q07896 663 aaPredicted RBP8.35□□□□□ -1.07
NDE2YDL085W SEY1Q99287 776 aa8.35□□□□□ -1.07
NDE2YDL085W ADH4P10127 382 aa8.34□□□□□ -1.07
NDE2YDL085W ILV6P25605 309 aaKnown RBP8.34□□□□□ -1.07
NDE2YDL085W YCR051WP25631 222 aa8.34□□□□□ -1.07
NDE2YDL085W CDC48P25694 835 aaKnown RBP8.34□□□□□ -1.07
NDE2YDL085W PIN4P34217 668 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
NDE2YDL085W NPP2P39997 493 aa8.34□□□□□ -1.07
NDE2YDL085W UBP15P50101 1230 aa8.34□□□□□ -1.07
NDE2YDL085W TAM41P53230 385 aa8.34□□□□□ -1.07
NDE2YDL085W ADA2Q02336 434 aa8.34□□□□□ -1.07
NDE2YDL085W YMR187CQ03236 431 aa8.34□□□□□ -1.07
NDE2YDL085W PIG1Q06216 648 aa8.34□□□□□ -1.07
NDE2YDL085W CDC53Q12018 815 aaKnown RBP8.34□□□□□ -1.07
NDE2YDL085W GAL11P19659 1081 aa8.33□□□□□ -1.08
NDE2YDL085W DBF4P32325 704 aa8.33□□□□□ -1.08
NDE2YDL085W PDB1P32473 366 aaKnown RBP8.33□□□□□ -1.08
NDE2YDL085W EUG1P32474 517 aa8.33□□□□□ -1.08
NDE2YDL085W YME1P32795 747 aa8.33□□□□□ -1.08
NDE2YDL085W HEL1P36113 551 aa8.33□□□□□ -1.08
NDE2YDL085W EXO5P38289 585 aa8.33□□□□□ -1.08
NDE2YDL085W RRT2P38332 387 aa8.33□□□□□ -1.08
NDE2YDL085W PEA2P40091 420 aa8.33□□□□□ -1.08
NDE2YDL085W PRY3P47033 881 aa8.33□□□□□ -1.08
NDE2YDL085W NET1P47035 1189 aa8.33□□□□□ -1.08
NDE2YDL085W RRT6P53117 311 aaPredicted RBP8.33□□□□□ -1.08
NDE2YDL085W YGR125WP53273 1036 aa8.33□□□□□ -1.08
NDE2YDL085W ROD1Q02805 837 aa8.33□□□□□ -1.08
NDE2YDL085W CWC15Q03772 175 aaKnown RBP8.33□□□□□ -1.08
NDE2YDL085W FRA1Q07825 749 aa8.33□□□□□ -1.08
NDE2YDL085W THS1P04801 734 aaKnown RBP8.32□□□□□ -1.08
NDE2YDL085W RPS3P05750 240 aaKnown RBP8.32□□□□□ -1.08
NDE2YDL085W NAT1P12945 854 aaKnown RBP8.32□□□□□ -1.08
NDE2YDL085W RAD5P32849 1169 aaPredicted RBP8.32□□□□□ -1.08
NDE2YDL085W TIF5P38431 405 aaKnown RBP8.32□□□□□ -1.08
NDE2YDL085W MMS21P38632 267 aa8.32□□□□□ -1.08
NDE2YDL085W FTR1P40088 404 aa8.32□□□□□ -1.08
NDE2YDL085W INA22P40576 216 aa8.32□□□□□ -1.08
NDE2YDL085W URB2P47108 1174 aa8.32□□□□□ -1.08
NDE2YDL085W ILM1P47155 203 aa8.32□□□□□ -1.08
NDE2YDL085W VPS70P47161 811 aa8.32□□□□□ -1.08
NDE2YDL085W RIM8P53179 542 aa8.32□□□□□ -1.08
NDE2YDL085W YGR111WP53265 400 aa8.32□□□□□ -1.08
NDE2YDL085W RTT102P53330 157 aa8.32□□□□□ -1.08
NDE2YDL085W CPR6P53691 371 aaKnown RBP8.32□□□□□ -1.08
NDE2YDL085W UTP6Q02354 440 aaKnown RBP8.32□□□□□ -1.08
NDE2YDL085W USA1Q03714 838 aa8.32□□□□□ -1.08
NDE2YDL085W PUS1Q12211 544 aaKnown RBP8.32□□□□□ -1.08
NDE2YDL085W SPO16P17122 198 aa8.32□□□□□ -1.08
NDE2YDL085W ARG1P22768 420 aa8.32□□□□□ -1.08
NDE2YDL085W TKL1P23254 680 aaKnown RBP8.32□□□□□ -1.08
NDE2YDL085W PLC1P32383 869 aa8.32□□□□□ -1.08
NDE2YDL085W SWI3P32591 825 aa8.32□□□□□ -1.08
NDE2YDL085W UTR4P32626 227 aa8.32□□□□□ -1.08
NDE2YDL085W RIM101P33400 625 aa8.32□□□□□ -1.08
NDE2YDL085W PMC1P38929 1173 aaPredicted RBP8.32□□□□□ -1.08
NDE2YDL085W YEL025CP39991 1188 aa8.32□□□□□ -1.08
NDE2YDL085W SMX2P40204 77 aaKnown RBP8.32□□□□□ -1.08
NDE2YDL085W TDA9Q04545 1251 aa8.32□□□□□ -1.08
NDE2YDL085W SLX4Q12098 748 aa8.32□□□□□ -1.08
NDE2YDL085W NCA2Q12374 616 aa8.32□□□□□ -1.08
NDE2YDL085W SEC39Q12745 709 aa8.32□□□□□ -1.08
NDE2YDL085W PMS1P14242 873 aa8.31□□□□□ -1.08
NDE2YDL085W REG2P38232 338 aa8.31□□□□□ -1.08
NDE2YDL085W ECM2P38241 364 aaKnown RBP8.31□□□□□ -1.08
NDE2YDL085W KAP123P40069 1113 aaKnown RBP8.31□□□□□ -1.08
NDE2YDL085W NMD5P46970 1048 aa8.31□□□□□ -1.08
NDE2YDL085W CLA4P48562 842 aa8.31□□□□□ -1.08
NDE2YDL085W HSH155P49955 971 aaKnown RBP8.31□□□□□ -1.08
NDE2YDL085W STE20Q03497 939 aaKnown RBP8.31□□□□□ -1.08
NDE2YDL085W PNP1Q05788 311 aa8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 9 ms