RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	NUP145	P49687	1317 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	CET1	O13297	549 aa	Predicted RBP	6.12	□□□□□ -1.43
SUB2	YDL084W	SUI3	P09064	285 aa	Known RBP	6.12	□□□□□ -1.43
SUB2	YDL084W	MSS116	P15424	664 aa	Known RBP	6.12	□□□□□ -1.43
SUB2	YDL084W	PRP28	P23394	588 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	SPB1	P25582	841 aa	Predicted RBP	6.12	□□□□□ -1.43
SUB2	YDL084W	RPN2	P32565	945 aa	Known RBP	6.12	□□□□□ -1.43
SUB2	YDL084W	DOA4	P32571	926 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	UTP11	P34247	250 aa	Predicted RBP	6.12	□□□□□ -1.43
SUB2	YDL084W	UBP11	P36026	717 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	PXL1	P36166	706 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	ALG3	P38179	458 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	CCZ1	P38273	704 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	MGE1	P38523	228 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	MSG5	P38590	489 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	GEM1	P39722	662 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	YJR061W	P40355	935 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	YFL066C	P43538	392 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	ALB1	P47019	175 aa	Predicted RBP	6.12	□□□□□ -1.43
SUB2	YDL084W	SPC105	P53148	917 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	YNR063W	P53749	607 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	TYW1	Q08960	810 aa	Known RBP	6.12	□□□□□ -1.43
SUB2	YDL084W	VIK1	Q12045	647 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	BUG1	Q12191	341 aa		6.12	□□□□□ -1.43
SUB2	YDL084W	HIS3	P06633	220 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	ERG12	P07277	443 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	ILS1	P09436	1072 aa	Known RBP	6.11	□□□□□ -1.43
SUB2	YDL084W	YML002W	P0CF17	737 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	ISY1	P21374	235 aa	Predicted RBP	6.11	□□□□□ -1.43
SUB2	YDL084W	DIT2	P21595	489 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	PRP22	P24384	1145 aa	Known RBP	6.11	□□□□□ -1.43
SUB2	YDL084W	NPP1	P25353	742 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	CHS3	P29465	1165 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	TFC4	P33339	1025 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	SRL3	P36167	246 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	FTH1	P38310	465 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	PAN5	P38787	379 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	NUP82	P40368	713 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	MKT1	P40850	830 aa	Known RBP	6.11	□□□□□ -1.43
SUB2	YDL084W	ROG3	P43602	733 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	BNA6	P43619	295 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	KAP114	P53067	1004 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	MLC1	P53141	149 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	YGR266W	P53326	701 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	ERV25	P54837	211 aa	Known RBP	6.11	□□□□□ -1.43
SUB2	YDL084W	RSC4	Q02206	625 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	VPS16	Q03308	798 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	TRS130	Q03660	1102 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	SML1	Q04964	104 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	RBS1	Q05672	457 aa	Known RBP	6.11	□□□□□ -1.43
SUB2	YDL084W	SEC10	Q06245	871 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	ESC2	Q06340	456 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	YDL124W	Q07551	312 aa	Known RBP	6.11	□□□□□ -1.43
SUB2	YDL084W	DSE3	Q08729	430 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	YPR204W	Q08995	1032 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	STB3	Q12427	513 aa		6.11	□□□□□ -1.43
SUB2	YDL084W	DMC1	P25453	334 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	RDS1	P25611	832 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	VPS17	P32913	551 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	VMA22	P38784	181 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	UTP9	P38882	575 aa	Known RBP	6.1	□□□□□ -1.43
SUB2	YDL084W	NIT1	P40447	199 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	YIL092W	P40497	633 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	SPO22	P40511	975 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	SYG1	P40528	902 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	ULP2	P40537	1034 aa	Predicted RBP	6.1	□□□□□ -1.43
SUB2	YDL084W	RLP7	P40693	322 aa	Known RBP	6.1	□□□□□ -1.43
SUB2	YDL084W	AIP1	P46680	615 aa	Known RBP	6.1	□□□□□ -1.43
SUB2	YDL084W	JJJ2	P46997	583 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	VPS53	P47061	822 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	CCT8	P47079	568 aa	Known RBP	6.1	□□□□□ -1.43
SUB2	YDL084W	YJR107W	P47145	328 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	VMA10	P48836	114 aa	Known RBP	6.1	□□□□□ -1.43
SUB2	YDL084W	ZIP2	P53061	704 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	YGL242C	P53066	181 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	YNR029C	P53729	429 aa	Known RBP	6.1	□□□□□ -1.43
SUB2	YDL084W	GCR2	Q01722	534 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	HOS3	Q02959	697 aa	Known RBP	6.1	□□□□□ -1.43
SUB2	YDL084W	DML1	Q03652	475 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	YML083C	Q04526	418 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	ATG17	Q06410	417 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	TMA17	Q12513	150 aa		6.1	□□□□□ -1.43
SUB2	YDL084W	CIT1	P00890	479 aa		6.09	□□□□□ -1.43
SUB2	YDL084W	ARG81	P05085	880 aa		6.09	□□□□□ -1.43
SUB2	YDL084W	STE3	P06783	470 aa		6.09	□□□□□ -1.43
SUB2	YDL084W	FUR1	P18562	216 aa	Known RBP	6.09	□□□□□ -1.43
SUB2	YDL084W	SMF2	P38778	549 aa		6.09	□□□□□ -1.43
SUB2	YDL084W	RSC30	P38781	883 aa		6.09	□□□□□ -1.43
SUB2	YDL084W	SEC31	P38968	1273 aa	Known RBP	6.09	□□□□□ -1.43
SUB2	YDL084W	GPP1	P41277	250 aa	Known RBP	6.09	□□□□□ -1.43
SUB2	YDL084W	CCT7	P42943	550 aa	Known RBP	6.09	□□□□□ -1.43
SUB2	YDL084W	SPO74	P45819	413 aa		6.09	□□□□□ -1.43
SUB2	YDL084W	ISM1	P48526	1002 aa		6.09	□□□□□ -1.43
SUB2	YDL084W	YGR054W	P53235	642 aa	Known RBP	6.09	□□□□□ -1.43
SUB2	YDL084W	CUS1	Q02554	436 aa	Predicted RBP	6.09	□□□□□ -1.43
SUB2	YDL084W	YML131W	Q03102	365 aa		6.09	□□□□□ -1.43
SUB2	YDL084W	PRP42	Q03776	544 aa	Known RBP	6.09	□□□□□ -1.43
SUB2	YDL084W	PLP1	Q04004	230 aa		6.09	□□□□□ -1.43
SUB2	YDL084W	RTN1	Q04947	295 aa	Known RBP	6.09	□□□□□ -1.43
SUB2	YDL084W	BUD20	Q08004	166 aa	Predicted RBP	6.09	□□□□□ -1.43

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms