RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W NOB1Q08444 459 aaKnown RBP8.45□□□□□ -1.06
ABP1YCR088W TAF10Q12030 206 aa8.45□□□□□ -1.06
ABP1YCR088W NCR1Q12200 1170 aa8.45□□□□□ -1.06
ABP1YCR088W YDL206WQ12424 762 aa8.45□□□□□ -1.06
ABP1YCR088W CBF1P17106 351 aa8.44□□□□□ -1.06
ABP1YCR088W BAS1P22035 811 aa8.44□□□□□ -1.06
ABP1YCR088W KIP1P28742 1111 aa8.44□□□□□ -1.06
ABP1YCR088W SUV3P32580 737 aa8.44□□□□□ -1.06
ABP1YCR088W HEK2P38199 381 aaKnown RBP RIP-Chip data8.44□□□□□ -1.06not detected
ABP1YCR088W MSG5P38590 489 aa8.44□□□□□ -1.06
ABP1YCR088W PSY2P40164 858 aa8.44□□□□□ -1.06
ABP1YCR088W INA22P40576 216 aa8.44□□□□□ -1.06
ABP1YCR088W ALD6P54115 500 aaKnown RBP8.44□□□□□ -1.06
ABP1YCR088W CST9Q06032 482 aa8.44□□□□□ -1.06
ABP1YCR088W CMS1Q07897 291 aaKnown RBP8.44□□□□□ -1.06
ABP1YCR088W CDC33P07260 213 aaKnown RBP8.43□□□□□ -1.06
ABP1YCR088W PEP5P12868 1029 aa8.43□□□□□ -1.06
ABP1YCR088W PEX2P32800 271 aa8.43□□□□□ -1.06
ABP1YCR088W SAK1P38990 1142 aa8.43□□□□□ -1.06
ABP1YCR088W TMA22P47089 198 aaPredicted RBP8.43□□□□□ -1.06
ABP1YCR088W SNU71P53207 620 aaKnown RBP8.43□□□□□ -1.06
ABP1YCR088W SUB1P54000 292 aaKnown RBP8.43□□□□□ -1.06
ABP1YCR088W SEN54Q02825 467 aaPredicted RBP8.43□□□□□ -1.06
ABP1YCR088W DUS4Q06063 367 aa8.43□□□□□ -1.06
ABP1YCR088W MAG2Q06436 670 aaKnown RBP8.43□□□□□ -1.06
ABP1YCR088W RLP24Q07915 199 aaKnown RBP8.43□□□□□ -1.06
ABP1YCR088W ARD1P07347 238 aaPredicted RBP8.43□□□□□ -1.06
ABP1YCR088W RPB2P08518 1224 aaKnown RBP8.43□□□□□ -1.06
ABP1YCR088W EUG1P32474 517 aa8.43□□□□□ -1.06
ABP1YCR088W TFC4P33339 1025 aa8.43□□□□□ -1.06
ABP1YCR088W UBP13P38187 747 aa8.43□□□□□ -1.06
ABP1YCR088W PHO88P38264 188 aaPredicted RBP8.43□□□□□ -1.06
ABP1YCR088W VHC1P38329 1120 aa8.43□□□□□ -1.06
ABP1YCR088W CLA4P48562 842 aa8.43□□□□□ -1.06
ABP1YCR088W TFB2Q02939 513 aa8.43□□□□□ -1.06
ABP1YCR088W HIF1Q12373 385 aa8.43□□□□□ -1.06
ABP1YCR088W RKM4Q12504 494 aa8.43□□□□□ -1.06
ABP1YCR088W SNF1P06782 633 aaKnown RBP8.42□□□□□ -1.06
ABP1YCR088W VAN1P23642 535 aa8.42□□□□□ -1.06
ABP1YCR088W SQT1P35184 431 aa8.42□□□□□ -1.06
ABP1YCR088W RIX1P38883 763 aaPredicted RBP8.42□□□□□ -1.06
ABP1YCR088W ASG1P40467 964 aa8.42□□□□□ -1.06
ABP1YCR088W DAS1P47005 663 aa8.42□□□□□ -1.06
ABP1YCR088W ZIP2P53061 704 aa8.42□□□□□ -1.06
ABP1YCR088W VPS16Q03308 798 aa8.42□□□□□ -1.06
ABP1YCR088W TMA64Q04600 565 aaKnown RBP8.42□□□□□ -1.06
ABP1YCR088W YDR222WQ04925 415 aa8.42□□□□□ -1.06
ABP1YCR088W OSW1Q08692 278 aa8.42□□□□□ -1.06
ABP1YCR088W YMR085WP0CF18 432 aa8.41□□□□□ -1.06
ABP1YCR088W YSC83P32792 385 aa8.41□□□□□ -1.06
ABP1YCR088W YBL055CP34220 418 aaPredicted RBP8.41□□□□□ -1.06
ABP1YCR088W YBP1P38315 674 aa8.41□□□□□ -1.06
ABP1YCR088W FIS1P40515 155 aa8.41□□□□□ -1.06
ABP1YCR088W GTR1Q00582 310 aa8.41□□□□□ -1.06
ABP1YCR088W VPS72Q03388 795 aa8.41□□□□□ -1.06
ABP1YCR088W CUR1Q06469 252 aa8.41□□□□□ -1.06
ABP1YCR088W PUS1Q12211 544 aaKnown RBP8.41□□□□□ -1.06
ABP1YCR088W GAP1P19145 602 aaPredicted RBP8.4□□□□□ -1.06
ABP1YCR088W DAL2P25335 343 aa8.4□□□□□ -1.06
ABP1YCR088W SEC21P32074 935 aaKnown RBP8.4□□□□□ -1.06
ABP1YCR088W DBF4P32325 704 aa8.4□□□□□ -1.06
ABP1YCR088W MVD1P32377 396 aaKnown RBP8.4□□□□□ -1.06
ABP1YCR088W NIP1P32497 812 aaKnown RBP8.4□□□□□ -1.06
ABP1YCR088W YBR032WP38223 100 aa8.4□□□□□ -1.06
ABP1YCR088W SPC72P39723 622 aa8.4□□□□□ -1.06
ABP1YCR088W LIF1P53150 421 aa8.4□□□□□ -1.06
ABP1YCR088W TAM41P53230 385 aa8.4□□□□□ -1.06
ABP1YCR088W YNL040WP53960 456 aaPredicted RBP8.4□□□□□ -1.06
ABP1YCR088W SPC24Q04477 213 aa8.4□□□□□ -1.06
ABP1YCR088W ALR1Q08269 859 aa8.4□□□□□ -1.06
ABP1YCR088W PGK1P00560 416 aaKnown RBP8.4□□□□□ -1.07
ABP1YCR088W ILV2P07342 687 aaKnown RBP8.4□□□□□ -1.07
ABP1YCR088W SAM1P10659 382 aaKnown RBP8.4□□□□□ -1.07
ABP1YCR088W HEM15P16622 393 aa8.4□□□□□ -1.07
ABP1YCR088W SPO16P17122 198 aa8.4□□□□□ -1.07
ABP1YCR088W MLS1P30952 554 aa8.4□□□□□ -1.07
ABP1YCR088W MUD1P32605 298 aaKnown RBP8.4□□□□□ -1.07
ABP1YCR088W YGR111WP53265 400 aa8.4□□□□□ -1.07
ABP1YCR088W CNM67P53865 581 aaKnown RBP8.4□□□□□ -1.07
ABP1YCR088W DON1Q05610 365 aa8.4□□□□□ -1.07
ABP1YCR088W GCR1P07261 785 aa8.39□□□□□ -1.07
ABP1YCR088W RAD18P10862 487 aa8.39□□□□□ -1.07
ABP1YCR088W DBP5P20449 482 aaKnown RBP8.39□□□□□ -1.07
ABP1YCR088W IME1P21190 360 aa8.39□□□□□ -1.07
ABP1YCR088W YTA12P40341 825 aa8.39□□□□□ -1.07
ABP1YCR088W AVT1P47082 602 aa8.39□□□□□ -1.07
ABP1YCR088W RSM26P47141 266 aa8.39□□□□□ -1.07
ABP1YCR088W ILM1P47155 203 aa8.39□□□□□ -1.07
ABP1YCR088W ENV11P53246 860 aa8.39□□□□□ -1.07
ABP1YCR088W SOL4P53315 255 aa8.39□□□□□ -1.07
ABP1YCR088W YML119WQ03208 357 aa8.39□□□□□ -1.07
ABP1YCR088W ATG16Q03818 150 aa8.39□□□□□ -1.07
ABP1YCR088W UFO1Q04511 668 aa8.39□□□□□ -1.07
ABP1YCR088W PHM6Q05637 104 aa8.39□□□□□ -1.07
ABP1YCR088W CRD1Q07560 283 aa8.39□□□□□ -1.07
ABP1YCR088W SEC39Q12745 709 aa8.39□□□□□ -1.07
ABP1YCR088W THS1P04801 734 aaKnown RBP8.38□□□□□ -1.07
ABP1YCR088W RAD10P06838 210 aa8.38□□□□□ -1.07
ABP1YCR088W CBF2P32504 956 aa8.38□□□□□ -1.07
ABP1YCR088W RAD5P32849 1169 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 49 ms