RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W CFT1Q06632 1357 aaKnown RBP6.21□□□□□ -1.41
RER1YCL001W CDC48P25694 835 aaKnown RBP6.21□□□□□ -1.42
RER1YCL001W STE14P32584 239 aa6.21□□□□□ -1.42
RER1YCL001W MOH1P38191 138 aa6.21□□□□□ -1.42
RER1YCL001W NPP1P25353 742 aa6.2□□□□□ -1.42
RER1YCL001W YDR306CQ06640 478 aa6.2□□□□□ -1.42
RER1YCL001W YLR040CQ07988 224 aa6.2□□□□□ -1.42
RER1YCL001W PRI2P20457 528 aa6.19□□□□□ -1.42
RER1YCL001W CAD1P24813 409 aaKnown RBP6.19□□□□□ -1.42
RER1YCL001W AFR1P33304 620 aa6.19□□□□□ -1.42
RER1YCL001W MRP8P35719 219 aa6.19□□□□□ -1.42
RER1YCL001W JIP5Q06214 492 aaPredicted RBP6.19□□□□□ -1.42
RER1YCL001W BCK1Q01389 1478 aa6.18□□□□□ -1.42
RER1YCL001W NOT3P06102 836 aaKnown RBP6.18□□□□□ -1.42
RER1YCL001W SED4P25365 1065 aa6.18□□□□□ -1.42
RER1YCL001W PPH3P32345 308 aa6.18□□□□□ -1.42
RER1YCL001W KTR4P38131 464 aa6.18□□□□□ -1.42
RER1YCL001W PBY1P38254 753 aa6.17□□□□□ -1.42
RER1YCL001W SIT1P39980 628 aa6.17□□□□□ -1.42
RER1YCL001W YOL073CQ08232 322 aa6.17□□□□□ -1.42
RER1YCL001W RTC1Q08281 1341 aa6.17□□□□□ -1.42
RER1YCL001W ADE8P04161 214 aa6.16□□□□□ -1.42
RER1YCL001W TRP4P07285 380 aaPredicted RBP6.16□□□□□ -1.42
RER1YCL001W AAR2P32357 355 aaPredicted RBP6.16□□□□□ -1.42
RER1YCL001W SLU7Q02775 382 aaKnown RBP6.16□□□□□ -1.42
RER1YCL001W FBP1P09201 348 aa6.15□□□□□ -1.42
RER1YCL001W ERG4P25340 473 aa6.15□□□□□ -1.42
RER1YCL001W STE13P33894 931 aa6.15□□□□□ -1.42
RER1YCL001W PAF1P38351 445 aa6.15□□□□□ -1.42
RER1YCL001W SUL1P38359 859 aa6.15□□□□□ -1.42
RER1YCL001W YRO2P38079 344 aa6.14□□□□□ -1.43
RER1YCL001W IRR1P40541 1150 aa6.14□□□□□ -1.43
RER1YCL001W UBA2P52488 636 aa6.14□□□□□ -1.43
RER1YCL001W TPO2P53283 614 aa6.14□□□□□ -1.43
RER1YCL001W KRE5P22023 1365 aa6.14□□□□□ -1.43
RER1YCL001W SPF1P39986 1215 aaKnown RBP6.13□□□□□ -1.43
RER1YCL001W ERG5P54781 538 aa6.13□□□□□ -1.43
RER1YCL001W SSL1Q04673 461 aaPredicted RBP6.13□□□□□ -1.43
RER1YCL001W NUP192P47054 1683 aa6.13□□□□□ -1.43
RER1YCL001W SNU71P53207 620 aaKnown RBP6.12□□□□□ -1.43
RER1YCL001W YNR029CP53729 429 aaKnown RBP6.12□□□□□ -1.43
RER1YCL001W RIA1P53893 1110 aa6.12□□□□□ -1.43
RER1YCL001W VPS30Q02948 557 aa6.12□□□□□ -1.43
RER1YCL001W BUL2Q03758 920 aaKnown RBP6.12□□□□□ -1.43
RER1YCL001W VAC8P39968 578 aa6.11□□□□□ -1.43
RER1YCL001W SDP1P40479 209 aa6.11□□□□□ -1.43
RER1YCL001W CCM1P48237 864 aaPredicted RBP6.11□□□□□ -1.43
RER1YCL001W ALD6P54115 500 aaKnown RBP6.11□□□□□ -1.43
RER1YCL001W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
RER1YCL001W OMS1Q06668 471 aa6.11□□□□□ -1.43
RER1YCL001W SEC21P32074 935 aaKnown RBP6.1□□□□□ -1.43
RER1YCL001W HBS1P32769 611 aaKnown RBP6.1□□□□□ -1.43
RER1YCL001W STE5P32917 917 aa6.1□□□□□ -1.43
RER1YCL001W RNT1Q02555 471 aa6.1□□□□□ -1.43
RER1YCL001W RAD9P14737 1309 aa6.09□□□□□ -1.43
RER1YCL001W PRP9P19736 530 aaKnown RBP6.09□□□□□ -1.43
RER1YCL001W RPD3P32561 433 aa6.09□□□□□ -1.43
RER1YCL001W ERT1P38140 529 aa6.09□□□□□ -1.43
RER1YCL001W CTF8P38877 133 aa6.09□□□□□ -1.43
RER1YCL001W LCD1Q04377 747 aa6.09□□□□□ -1.43
RER1YCL001W TDA5Q06417 326 aaKnown RBP6.09□□□□□ -1.43
RER1YCL001W YIL108WP40483 696 aaKnown RBP6.08□□□□□ -1.44
RER1YCL001W PFD1P46988 109 aa6.08□□□□□ -1.44
RER1YCL001W NOP7P53261 605 aaKnown RBP6.08□□□□□ -1.44
RER1YCL001W PEX19Q07418 342 aa6.08□□□□□ -1.44
RER1YCL001W MCH5Q08777 521 aa6.08□□□□□ -1.44
RER1YCL001W TRM13Q12383 476 aa6.08□□□□□ -1.44
RER1YCL001W PPR1P07272 904 aaPredicted RBP6.07□□□□□ -1.44
RER1YCL001W RFA1P22336 621 aaKnown RBP6.07□□□□□ -1.44
RER1YCL001W TYE7P33122 291 aaPredicted RBP6.07□□□□□ -1.44
RER1YCL001W TOK1P40310 691 aa6.07□□□□□ -1.44
RER1YCL001W YKR011CQ02209 353 aa6.07□□□□□ -1.44
RER1YCL001W TMN2Q04562 672 aa6.07□□□□□ -1.44
RER1YCL001W ACF2Q12168 779 aa6.07□□□□□ -1.44
RER1YCL001W ALG7P07286 448 aa6.06□□□□□ -1.44
RER1YCL001W SCT1P32784 759 aa6.06□□□□□ -1.44
RER1YCL001W CTF13P35203 478 aa6.06□□□□□ -1.44
RER1YCL001W YBR184WP38299 523 aa6.06□□□□□ -1.44
RER1YCL001W STB4P50104 949 aa6.06□□□□□ -1.44
RER1YCL001W TUB3P09734 445 aaKnown RBP6.05□□□□□ -1.44
RER1YCL001W REC104P33323 182 aa6.05□□□□□ -1.44
RER1YCL001W HDA1P53973 706 aa6.05□□□□□ -1.44
RER1YCL001W TRM11Q12463 433 aa6.05□□□□□ -1.44
RER1YCL001W URA1P28272 314 aaPredicted RBP6.04□□□□□ -1.44
RER1YCL001W ESL2P36168 1195 aa6.04□□□□□ -1.44
RER1YCL001W QRI1P43123 477 aaKnown RBP6.04□□□□□ -1.44
RER1YCL001W TIM44Q01852 431 aa6.04□□□□□ -1.44
RER1YCL001W FMP25Q08023 583 aa6.04□□□□□ -1.44
RER1YCL001W TY3B-IQ7LHG5 1498 aaKnown RBP6.03□□□□□ -1.44
RER1YCL001W CDC11P32458 415 aa6.03□□□□□ -1.44
RER1YCL001W STU2P46675 888 aa6.03□□□□□ -1.44
RER1YCL001W YMR206WQ03695 313 aa6.03□□□□□ -1.44
RER1YCL001W SWM1Q12379 170 aa6.03□□□□□ -1.44
RER1YCL001W PAM1P37304 830 aaKnown RBP6.02□□□□□ -1.45
RER1YCL001W CEP3P40969 608 aa6.02□□□□□ -1.45
RER1YCL001W ALR2P43553 858 aa6.02□□□□□ -1.45
RER1YCL001W UTP8P53276 713 aaKnown RBP6.02□□□□□ -1.45
RER1YCL001W MUK1Q02866 612 aa6.02□□□□□ -1.45
RER1YCL001W YML122CQ03207 126 aa6.02□□□□□ -1.45
RER1YCL001W IRC10Q08118 586 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms