RNA–Protein interactions for RNA: YBR114W

RAD16, Transcript of Nucleotide excision repair (NER) protein, yeast

Gene RAD16, Length 2,373 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD16	YBR114W	MSH2	P25847	964 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	RVS167	P39743	482 aa	Known RBP	4.93	□□□□□ -1.62
RAD16	YBR114W	SBE2	P42223	864 aa	Known RBP	4.93	□□□□□ -1.62
RAD16	YBR114W	ATP22	P50273	684 aa	Predicted RBP	4.93	□□□□□ -1.62
RAD16	YBR114W	PTA1	Q01329	785 aa	Predicted RBP	4.93	□□□□□ -1.62
RAD16	YBR114W	CIK1	Q01649	594 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	VPS16	Q03308	798 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	KAR5	Q04746	504 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	DPL1	Q05567	589 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	YOR296W	Q08748	1289 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
RAD16	YBR114W	MCD1	Q12158	566 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	SCM3	Q12334	223 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	GAL1	P04385	528 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	ADE3	P07245	946 aa	Known RBP	4.93	□□□□□ -1.62
RAD16	YBR114W	YCR016W	P25617	290 aa	Known RBP	4.93	□□□□□ -1.62
RAD16	YBR114W	NTG1	P31378	399 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	VMA8	P32610	256 aa	Known RBP	4.93	□□□□□ -1.62
RAD16	YBR114W	PEX6	P33760	1030 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	MNN2	P38069	597 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	STB4	P50104	949 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	INA17	Q02888	182 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	MCM21	Q06675	368 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	VIP1	Q06685	1146 aa	Known RBP	4.93	□□□□□ -1.62
RAD16	YBR114W	YDL124W	Q07551	312 aa	Known RBP	4.93	□□□□□ -1.62
RAD16	YBR114W	ATG9	Q12142	997 aa		4.93	□□□□□ -1.62
RAD16	YBR114W	PRP16	P15938	1071 aa	Predicted RBP	4.92	□□□□□ -1.62
RAD16	YBR114W	MRPL8	P22353	238 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	VPS3	P23643	1011 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	HEM3	P28789	327 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	RRN3	P36070	627 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	GLO3	P38682	493 aa	Known RBP	4.92	□□□□□ -1.62
RAD16	YBR114W	STP2	P38704	541 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	CTM1	P38818	585 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	VID27	P40157	782 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	YIL001W	P40560	513 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	FMS1	P50264	508 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	GIM3	P53900	129 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	ALF1	P53904	254 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	MUB1	Q03162	620 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	SOG2	Q08817	791 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	CTT1	P06115	562 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	VAS1	P07806	1104 aa	Known RBP	4.92	□□□□□ -1.62
RAD16	YBR114W	AFG2	P32794	780 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	ATO2	P32907	282 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	OCT1	P35999	772 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	BOI1	P38041	980 aa	Known RBP	4.92	□□□□□ -1.62
RAD16	YBR114W	CIR1	P42940	261 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	GCV2	P49095	1034 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	NUP42	P49686	430 aa	Known RBP	4.92	□□□□□ -1.62
RAD16	YBR114W	RPA14	P50106	137 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	EGD1	Q02642	157 aa	Known RBP	4.92	□□□□□ -1.62
RAD16	YBR114W	RRN5	Q02983	363 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	FIN1	Q03898	291 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	EAF1	Q06337	982 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	VHS3	Q08438	674 aa		4.92	□□□□□ -1.62
RAD16	YBR114W	PMR1	P13586	950 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	HSP30	P25619	332 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	YME1	P32795	747 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	RAD5	P32849	1169 aa	Predicted RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	DOM34	P33309	386 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	DBP7	P36120	742 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	MRPL10	P36520	322 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	RTC3	P38804	111 aa	Predicted RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	CCT3	P39077	534 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	ALD5	P40047	520 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	SEC28	P40509	296 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	PCI8	P40512	444 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	YBP2	P53169	641 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	COG2	P53271	262 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	YNL108C	P53929	270 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	TAF12	Q03761	539 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	YOL036W	Q08206	761 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	DAP2	P18962	818 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	CKA2	P19454	339 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	CLB3	P24870	427 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	KCC4	P25389	1037 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	RDS1	P25611	832 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	URA1	P28272	314 aa	Predicted RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	PPG1	P32838	368 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	TEF4	P36008	412 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	ERT1	P38140	529 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	RPN10	P38886	268 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	HXT6	P39003	570 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	HXT7	P39004	570 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	JLP2	P40206	208 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	VMA10	P48836	114 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	ZIP2	P53061	704 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	DSD1	P53095	428 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	KRE33	P53914	1056 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	ATG16	Q03818	150 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	YLR287C	Q05881	355 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	SUB2	Q07478	446 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	RSA1	Q08932	381 aa		4.91	□□□□□ -1.62
RAD16	YBR114W	CDC53	Q12018	815 aa	Known RBP	4.91	□□□□□ -1.62
RAD16	YBR114W	KAR2	P16474	682 aa	Known RBP	4.9	□□□□□ -1.62
RAD16	YBR114W	DBF2	P22204	572 aa		4.9	□□□□□ -1.62
RAD16	YBR114W	ASF2	P32448	525 aa	Predicted RBP	4.9	□□□□□ -1.62
RAD16	YBR114W	MSR1	P38714	643 aa		4.9	□□□□□ -1.62
RAD16	YBR114W	DYS1	P38791	387 aa		4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms