RNA–Protein interactions for RNA: YBR058C

UBP14, Transcript of Ubiquitin-specific protease, yeast

Gene UBP14, Length 2,346 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP14	YBR058C	GCN20	P43535	752 aa	Known RBP	3.16	□□□□□ -1.9
UBP14	YBR058C	NMD5	P46970	1048 aa		3.16	□□□□□ -1.9
UBP14	YBR058C	YNL040W	P53960	456 aa	Predicted RBP	3.16	□□□□□ -1.9
UBP14	YBR058C	RMT2	Q03305	412 aa		3.16	□□□□□ -1.9
UBP14	YBR058C	YPQ2	Q06328	317 aa		3.16	□□□□□ -1.9
UBP14	YBR058C	OPY2	Q06810	360 aa		3.16	□□□□□ -1.9
UBP14	YBR058C	SPO75	Q07798	868 aa		3.16	□□□□□ -1.9
UBP14	YBR058C	YOR296W	Q08748	1289 aa		3.16	□□□□□ -1.9
UBP14	YBR058C	YPL216W	Q08964	1102 aa		3.16	□□□□□ -1.9
UBP14	YBR058C	RIO1	Q12196	484 aa	Known RBP	3.16	□□□□□ -1.9
UBP14	YBR058C	CLF1	Q12309	687 aa	Predicted RBP	3.16	□□□□□ -1.9
UBP14	YBR058C	MIP1	P15801	1254 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	PWP1	P21304	576 aa	Known RBP	3.15	□□□□□ -1.9
UBP14	YBR058C	PHO87	P25360	923 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	CDC48	P25694	835 aa	Known RBP	3.15	□□□□□ -1.9
UBP14	YBR058C	NAM7	P30771	971 aa	Known RBP	3.15	□□□□□ -1.9
UBP14	YBR058C	BUD2	P33314	1104 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	SMC2	P38989	1170 aa	Known RBP	3.15	□□□□□ -1.9
UBP14	YBR058C	NUP60	P39705	539 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	YFL034W	P43564	1073 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	KAP114	P53067	1004 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	HST3	P53687	447 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	GDE1	Q02979	1223 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	KRE28	Q04431	385 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	SSP2	Q08646	371 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	RRI2	Q12348	645 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	ZRT2	Q12436	422 aa		3.15	□□□□□ -1.9
UBP14	YBR058C	ADE3	P07245	946 aa	Known RBP	3.15	□□□□□ -1.91
UBP14	YBR058C	SWI5	P08153	709 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	NAT1	P12945	854 aa	Known RBP	3.15	□□□□□ -1.91
UBP14	YBR058C	CLN3	P13365	580 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	SIN4	P32259	974 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	YKL091C	P33324	310 aa	Known RBP	3.15	□□□□□ -1.91
UBP14	YBR058C	SRL3	P36167	246 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	SSN3	P39073	555 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	MMM1	P41800	426 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	YRB1	P41920	201 aa	Known RBP	3.15	□□□□□ -1.91
UBP14	YBR058C	BRE2	P43132	505 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	RPC17	P47076	161 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	SHE10	P53075	577 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	SHE9	Q04172	456 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	BDS1	Q08347	646 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	YOR111W	Q99210	232 aa		3.15	□□□□□ -1.91
UBP14	YBR058C	FAS2	P19097	1887 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	MET6	P05694	767 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	ADH4	P10127	382 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	SNA3	P14359	133 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	POL3	P15436	1097 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	ADE2	P21264	571 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	PRP45	P28004	379 aa	Predicted RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	PYC2	P32327	1180 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	SSE1	P32589	693 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	YME1	P32795	747 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	VPS35	P34110	944 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	YBR032W	P38223	100 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	AMN1	P38285	549 aa	Predicted RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	GLO3	P38682	493 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	SPL2	P38839	148 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	CSM2	P40465	213 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	ATG36	P46983	293 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	IRC8	P47046	822 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	BRO1	P48582	844 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	MCM6	P53091	1017 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	YBP2	P53169	641 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	RIM8	P53179	542 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	CPR6	P53691	371 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	ASI1	P54074	624 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	UFD2	P54860	961 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	RPS15	Q01855	142 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	GIS4	Q04233	774 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	HFD1	Q04458	532 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	VIP1	Q06685	1146 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
UBP14	YBR058C	NFI1	Q12216	726 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	TCB1	Q12466	1186 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	RTP1	Q12751	981 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	SEY1	Q99287	776 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	SSA1	P10591	642 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	SSB1	P11484	613 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	VMA4	P22203	233 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	CDC3	P32457	520 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	EFB1	P32471	206 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	CBF2	P32504	956 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	SUV3	P32580	737 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	XRS2	P33301	854 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	JNM1	P36224	373 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	MAL31	P38156	614 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	ERP5	P38819	212 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	SSB2	P40150	613 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	SIP5	P40210	489 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	KTR7	P40504	517 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	SEC27	P41811	889 aa	Known RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	VTC4	P47075	721 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	FMS1	P50264	508 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	UBA2	P52488	636 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	YGL138C	P53122	345 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	ORM1	P53224	222 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	IST1	P53843	298 aa	Predicted RBP	3.14	□□□□□ -1.91
UBP14	YBR058C	RTC4	P53850	401 aa		3.14	□□□□□ -1.91
UBP14	YBR058C	UTP14	Q04500	899 aa	Known RBP	3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms