RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W HFI1Q12060 488 aa2.59□□□□□ -1.99
SNC1YAL030W YDR215CQ12240 137 aa2.59□□□□□ -1.99
SNC1YAL030W RIB2Q12362 591 aaKnown RBP2.59□□□□□ -1.99
SNC1YAL030W YPR053CQ6Q5F3 151 aa2.59□□□□□ -1.99
SNC1YAL030W FBP1P09201 348 aa2.58□□□□□ -2
SNC1YAL030W YEF3P16521 1044 aaKnown RBP2.58□□□□□ -2
SNC1YAL030W PTP2P29461 750 aa2.58□□□□□ -2
SNC1YAL030W CYS3P31373 394 aaKnown RBP2.58□□□□□ -2
SNC1YAL030W COQ2P32378 372 aa2.58□□□□□ -2
SNC1YAL030W AIM26P32858 118 aa2.58□□□□□ -2
SNC1YAL030W ATG19P35193 415 aa2.58□□□□□ -2
SNC1YAL030W YKL133CP36066 463 aa2.58□□□□□ -2
SNC1YAL030W MAL31P38156 614 aa2.58□□□□□ -2
SNC1YAL030W BIT2P38346 545 aa2.58□□□□□ -2
SNC1YAL030W RIM4P38741 713 aa2.58□□□□□ -2
SNC1YAL030W TDA3P38758 523 aa2.58□□□□□ -2
SNC1YAL030W SHR5P41912 237 aa2.58□□□□□ -2
SNC1YAL030W YJR039WP47107 1121 aa2.58□□□□□ -2
SNC1YAL030W ZIP2P53061 704 aa2.58□□□□□ -2
SNC1YAL030W PCL10P53124 433 aa2.58□□□□□ -2
SNC1YAL030W NPY1P53164 384 aa2.58□□□□□ -2
SNC1YAL030W YGR021WP53212 290 aa2.58□□□□□ -2
SNC1YAL030W PTA1Q01329 785 aaPredicted RBP2.58□□□□□ -2
SNC1YAL030W RSM24Q03976 319 aa2.58□□□□□ -2
SNC1YAL030W MLC2Q06580 163 aa2.58□□□□□ -2
SNC1YAL030W YDL121CQ07541 149 aa2.58□□□□□ -2
SNC1YAL030W PEX15Q08215 383 aa2.58□□□□□ -2
SNC1YAL030W DCS2Q12123 353 aa2.58□□□□□ -2
SNC1YAL030W NKP1Q12493 238 aa2.58□□□□□ -2
SNC1YAL030W MPD2Q99316 277 aa2.58□□□□□ -2
SNC1YAL030W PRC1P00729 532 aa2.57□□□□□ -2
SNC1YAL030W TRX2P22803 104 aaKnown RBP2.57□□□□□ -2
SNC1YAL030W KCC4P25389 1037 aa2.57□□□□□ -2
SNC1YAL030W YCL002CP25565 263 aa2.57□□□□□ -2
SNC1YAL030W APL1P27351 700 aa2.57□□□□□ -2
SNC1YAL030W NAM7P30771 971 aaKnown RBP2.57□□□□□ -2
SNC1YAL030W HEM12P32347 362 aaPredicted RBP2.57□□□□□ -2
SNC1YAL030W SRP101P32916 621 aa2.57□□□□□ -2
SNC1YAL030W PTH2P34222 208 aa2.57□□□□□ -2
SNC1YAL030W SAP190P36123 1033 aa2.57□□□□□ -2
SNC1YAL030W YKR051WP36142 418 aa2.57□□□□□ -2
SNC1YAL030W ABZ1P37254 787 aaPredicted RBP2.57□□□□□ -2
SNC1YAL030W PTC7P38797 343 aa2.57□□□□□ -2
SNC1YAL030W CTF8P38877 133 aa2.57□□□□□ -2
SNC1YAL030W HXT6P39003 570 aaKnown RBP2.57□□□□□ -2
SNC1YAL030W HXT7P39004 570 aa2.57□□□□□ -2
SNC1YAL030W YFL052WP43551 465 aa2.57□□□□□ -2
SNC1YAL030W PRY1P47032 299 aa2.57□□□□□ -2
SNC1YAL030W PSP2P50109 593 aaKnown RBP2.57□□□□□ -2
SNC1YAL030W UBC9P50623 157 aaPredicted RBP2.57□□□□□ -2
SNC1YAL030W FOL2P51601 243 aaKnown RBP2.57□□□□□ -2
SNC1YAL030W TAN1P53072 289 aaPredicted RBP2.57□□□□□ -2
SNC1YAL030W SLD3P53135 668 aa2.57□□□□□ -2
SNC1YAL030W SPC105P53148 917 aa2.57□□□□□ -2
SNC1YAL030W PUS2P53167 370 aa2.57□□□□□ -2
SNC1YAL030W YGR012WP53206 393 aa2.57□□□□□ -2
SNC1YAL030W DUS1P53759 423 aaKnown RBP2.57□□□□□ -2
SNC1YAL030W CNM67P53865 581 aaKnown RBP2.57□□□□□ -2
SNC1YAL030W ORC3P54790 616 aa2.57□□□□□ -2
SNC1YAL030W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
SNC1YAL030W RPN7Q06103 429 aaKnown RBP2.57□□□□□ -2
SNC1YAL030W PSR2Q07949 397 aa2.57□□□□□ -2
SNC1YAL030W YPR027CQ12079 277 aa2.57□□□□□ -2
SNC1YAL030W YOR022CQ12204 715 aa2.57□□□□□ -2
SNC1YAL030W YLR149CQ99296 730 aa2.57□□□□□ -2
SNC1YAL030W GAL1P04385 528 aa2.56□□□□□ -2
SNC1YAL030W SPE1P08432 466 aa2.56□□□□□ -2
SNC1YAL030W SWI6P09959 803 aa2.56□□□□□ -2
SNC1YAL030W CHS2P14180 963 aa2.56□□□□□ -2
SNC1YAL030W COX11P19516 300 aaKnown RBP2.56□□□□□ -2
SNC1YAL030W YCK2P23292 546 aaKnown RBP2.56□□□□□ -2
SNC1YAL030W ADP1P25371 1049 aa2.56□□□□□ -2
SNC1YAL030W DAL3P32459 195 aa2.56□□□□□ -2
SNC1YAL030W TAT1P38085 619 aa2.56□□□□□ -2
SNC1YAL030W FLR1P38124 548 aa2.56□□□□□ -2
SNC1YAL030W BEM4P39011 633 aa2.56□□□□□ -2
SNC1YAL030W ZRG8P40021 1076 aa2.56□□□□□ -2
SNC1YAL030W URM1P40554 99 aaPredicted RBP2.56□□□□□ -2
SNC1YAL030W MND2P40577 368 aa2.56□□□□□ -2
SNC1YAL030W GTS1P40956 396 aa2.56□□□□□ -2
SNC1YAL030W CEP3P40969 608 aa2.56□□□□□ -2
SNC1YAL030W RNR4P49723 345 aaKnown RBP2.56□□□□□ -2
SNC1YAL030W SSY1Q03770 852 aa2.56□□□□□ -2
SNC1YAL030W YHM2Q04013 314 aa2.56□□□□□ -2
SNC1YAL030W TMA64Q04600 565 aaKnown RBP2.56□□□□□ -2
SNC1YAL030W CRR1Q05790 422 aa2.56□□□□□ -2
SNC1YAL030W HAL9Q12180 1030 aa2.56□□□□□ -2
SNC1YAL030W YLR122CQ12312 125 aa2.56□□□□□ -2
SNC1YAL030W LPX1Q12405 387 aaKnown RBP2.56□□□□□ -2
SNC1YAL030W RPS21AP0C0V8 87 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W RPD3P32561 433 aa2.55□□□□□ -2
SNC1YAL030W MRS6P32864 603 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W KAE1P36132 386 aa2.55□□□□□ -2
SNC1YAL030W POA1P38218 177 aa2.55□□□□□ -2
SNC1YAL030W MIP6P38760 659 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W SSZ1P38788 538 aaKnown RBP2.55□□□□□ -2
SNC1YAL030W SKN7P38889 622 aa2.55□□□□□ -2
SNC1YAL030W SLN1P39928 1220 aaPredicted RBP2.55□□□□□ -2
SNC1YAL030W GID8P40208 455 aa2.55□□□□□ -2
SNC1YAL030W SDP1P40479 209 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms