RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	ULP1	Q02724	621 aa		4.15	□□□□□ -1.75
YAL004W	YAL004W	HAS1	Q03532	505 aa	Known RBP	4.15	□□□□□ -1.75
YAL004W	YAL004W	MLC2	Q06580	163 aa		4.15	□□□□□ -1.75
YAL004W	YAL004W	IMH1	Q06704	911 aa	Known RBP	4.15	□□□□□ -1.75
YAL004W	YAL004W	NEW1	Q08972	1196 aa	Known RBP	4.15	□□□□□ -1.75
YAL004W	YAL004W	HOM3	P10869	527 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	GSY1	P23337	708 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	MEF1	P25039	761 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	APE4	P38821	490 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	PIC2	P40035	300 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	OYE3	P41816	400 aa	Predicted RBP	4.14	□□□□□ -1.75
YAL004W	YAL004W	IML2	P47031	731 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	YJR124C	P47159	448 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	MAL11	P53048	616 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	DSD1	P53095	428 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	ERO1	Q03103	563 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	RCF1	Q03713	159 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	RTT109	Q07794	436 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	SSP2	Q08646	371 aa		4.14	□□□□□ -1.75
YAL004W	YAL004W	CYB2	P00175	591 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	TRP2	P00899	507 aa	Known RBP	4.13	□□□□□ -1.75
YAL004W	YAL004W	FLP1	P03870	423 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	APA1	P16550	321 aa	Known RBP	4.13	□□□□□ -1.75
YAL004W	YAL004W	PRP6	P19735	899 aa	Predicted RBP	4.13	□□□□□ -1.75
YAL004W	YAL004W	PRP5	P21372	849 aa	Predicted RBP	4.13	□□□□□ -1.75
YAL004W	YAL004W	BRF1	P29056	596 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	DBF20	P32328	564 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	MCM10	P32354	571 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	ANP1	P32629	500 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	SAS3	P34218	831 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	YKL050C	P35736	922 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	FIR1	P40020	876 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	ESL1	P40456	1118 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	XKS1	P42826	600 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	CIT3	P43635	486 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	GYP7	P48365	746 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	PBP1	P53297	722 aa	Known RBP	4.13	□□□□□ -1.75
YAL004W	YAL004W	ORC3	P54790	616 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	YMR018W	Q04364	514 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	PHM6	Q05637	104 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	YLR001C	Q07895	862 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	SLM3	Q12093	417 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	MED1	Q12321	566 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	EDE1	P34216	1381 aa		4.13	□□□□□ -1.75
YAL004W	YAL004W	TOM70	P07213	617 aa	Known RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	MSM1	P22438	575 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	CDC60	P26637	1090 aa	Known RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	URA1	P28272	314 aa	Predicted RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	VPH1	P32563	840 aa	Known RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	PXA2	P34230	853 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	MOT2	P34909	587 aa	Known RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	EBP2	P36049	427 aa	Known RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	AIM46	P38885	310 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	PSY2	P40164	858 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	NTA1	P40354	457 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	NEO1	P40527	1151 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	RGD2	P43556	714 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	RSC8	P43609	557 aa	Known RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	CNN1	P43618	361 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	HOS2	P53096	452 aa	Predicted RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	YNR063W	P53749	607 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	SNP1	Q00916	300 aa	Predicted RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
YAL004W	YAL004W	SRP1	Q02821	542 aa	Known RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	MTQ2	Q03920	221 aa	Predicted RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	YDR056C	Q12025	205 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	GLO4	Q12320	285 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	CMR1	Q12510	522 aa	Known RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	MDM12	Q92328	271 aa		4.12	□□□□□ -1.75
YAL004W	YAL004W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.12	□□□□□ -1.75
YAL004W	YAL004W	TY1B-A	O13527	1196 aa	Known RBP	4.11	□□□□□ -1.75
YAL004W	YAL004W	HSP82	P02829	709 aa	Known RBP	4.11	□□□□□ -1.75
YAL004W	YAL004W	AEP2	P22136	580 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	KCC4	P25389	1037 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	VBA3	P25594	458 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	IMP2'	P32351	346 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	LYP1	P32487	611 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	SQT1	P35184	431 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	IRS4	P36115	615 aa	Known RBP	4.11	□□□□□ -1.75
YAL004W	YAL004W	ABZ1	P37254	787 aa	Predicted RBP	4.11	□□□□□ -1.75
YAL004W	YAL004W	YHL041W	P38730	149 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	CCC2	P38995	1004 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	PES4	P39684	611 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	MGS1	P40151	587 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	SEC26	P41810	973 aa	Known RBP	4.11	□□□□□ -1.75
YAL004W	YAL004W	BNA1	P47096	177 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	RSM26	P47141	266 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	GPI8	P49018	411 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	MON1	P53129	644 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	TLG1	Q03322	224 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	IRC3	Q06683	689 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	OPY2	Q06810	360 aa		4.11	□□□□□ -1.75
YAL004W	YAL004W	TIF6	Q12522	245 aa	Known RBP	4.11	□□□□□ -1.75
YAL004W	YAL004W	PHO81	P17442	1178 aa		4.1	□□□□□ -1.75
YAL004W	YAL004W	NUP120	P35729	1037 aa		4.1	□□□□□ -1.75
YAL004W	YAL004W	GPT2	P36148	743 aa		4.1	□□□□□ -1.75
YAL004W	YAL004W	KTR4	P38131	464 aa		4.1	□□□□□ -1.75
YAL004W	YAL004W	ECM2	P38241	364 aa	Known RBP	4.1	□□□□□ -1.75
YAL004W	YAL004W	RRP8	P38961	392 aa	Known RBP	4.1	□□□□□ -1.75
YAL004W	YAL004W	FUN12	P39730	1002 aa	Known RBP	4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms