RNA–Protein interactions for RNA: ENST00000466872.2

C9orf135-202, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 794 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-202ENST00000466872 MMP10P09238 476 aa12.65□□□□□ -0.38
C9orf135-202ENST00000466872 CANXP27824 592 aaKnown RBP12.65□□□□□ -0.38
C9orf135-202ENST00000466872 RFC4P35249 363 aa12.65□□□□□ -0.38
C9orf135-202ENST00000466872 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
C9orf135-202ENST00000466872 KRT24Q2M2I5 525 aa12.65□□□□□ -0.38
C9orf135-202ENST00000466872 USPL1Q5W0Q7 1092 aa12.65□□□□□ -0.38
C9orf135-202ENST00000466872 PPP1R1BQ9UD71 204 aaPredicted RBP12.65□□□□□ -0.38
C9orf135-202ENST00000466872 TSPYL4Q9UJ04 414 aa12.65□□□□□ -0.38
C9orf135-202ENST00000466872 COL11A2P13942 1736 aaPredicted RBP12.65□□□□□ -0.38
C9orf135-202ENST00000466872 PXDNLA1KZ92 1463 aa12.65□□□□□ -0.38
C9orf135-202ENST00000466872 ANKRD36CQ5JPF3 1778 aa12.64□□□□□ -0.39
C9orf135-202ENST00000466872 TRIM6-TRIM34B2RNG4 842 aa12.64□□□□□ -0.39
C9orf135-202ENST00000466872 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
C9orf135-202ENST00000466872 PTGDRQ13258 359 aa12.64□□□□□ -0.39
C9orf135-202ENST00000466872 NLGN1Q8N2Q7 840 aa12.64□□□□□ -0.39
C9orf135-202ENST00000466872 POLRMTO00411 1230 aaKnown RBP12.63□□□□□ -0.39
C9orf135-202ENST00000466872 PRSS12P56730 875 aa12.63□□□□□ -0.39
C9orf135-202ENST00000466872 MMRN1Q13201 1228 aa12.63□□□□□ -0.39
C9orf135-202ENST00000466872 CDCA7LQ96GN5 454 aa12.63□□□□□ -0.39
C9orf135-202ENST00000466872 MBIPQ9NS73 344 aa12.63□□□□□ -0.39
C9orf135-202ENST00000466872 RABGEF1Q9UJ41 708 aa12.63□□□□□ -0.39
C9orf135-202ENST00000466872 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 SENP3-EIF4A1A0A087X0R7 540 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 NFIXQ14938 502 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 WWC1Q8IX03 1113 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 IFT57Q9NWB7 429 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 TSKSQ9UJT2 592 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 CD2APQ9Y5K6 639 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 CHD4Q14839 1912 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
C9orf135-202ENST00000466872 CARMIL3Q8ND23 1372 aa12.61□□□□□ -0.39
C9orf135-202ENST00000466872 PROSER3Q2NL68 480 aa12.61□□□□□ -0.39
C9orf135-202ENST00000466872 RBM27Q9P2N5 1060 aaKnown RBP12.61□□□□□ -0.39
C9orf135-202ENST00000466872 TBC1D2BQ9UPU7 963 aa12.61□□□□□ -0.39
C9orf135-202ENST00000466872 A0A087WZG4 1122 aa12.6□□□□□ -0.39
C9orf135-202ENST00000466872 CCER2I3L3R5 266 aa12.6□□□□□ -0.39
C9orf135-202ENST00000466872 KIAA1468Q9P260 1216 aa12.6□□□□□ -0.39
C9orf135-202ENST00000466872 FAM198AQ9UFP1 575 aa12.6□□□□□ -0.39
C9orf135-202ENST00000466872 ARFGEF2Q9Y6D5 1785 aa12.6□□□□□ -0.39
C9orf135-202ENST00000466872 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
C9orf135-202ENST00000466872 ZPR1O75312 459 aa12.59□□□□□ -0.39
C9orf135-202ENST00000466872 HOXB7P09629 217 aa12.59□□□□□ -0.39
C9orf135-202ENST00000466872 TBC1D9BQ66K14 1250 aa12.59□□□□□ -0.39
C9orf135-202ENST00000466872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
C9orf135-202ENST00000466872 DZIP3Q86Y13 1208 aaKnown RBP12.59□□□□□ -0.39
C9orf135-202ENST00000466872 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
C9orf135-202ENST00000466872 IL16Q14005 1332 aa12.59□□□□□ -0.39
C9orf135-202ENST00000466872 KCNA3P22001 575 aa12.58□□□□□ -0.4
C9orf135-202ENST00000466872 GNAI1P63096 354 aa12.58□□□□□ -0.4
C9orf135-202ENST00000466872 HLFQ16534 295 aa12.58□□□□□ -0.4
C9orf135-202ENST00000466872 TTLL7Q6ZT98 887 aa12.58□□□□□ -0.4
C9orf135-202ENST00000466872 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
C9orf135-202ENST00000466872 ATP10DQ9P241 1426 aa12.58□□□□□ -0.4
C9orf135-202ENST00000466872 TULP1O00294 542 aaPredicted RBP12.57□□□□□ -0.4
C9orf135-202ENST00000466872 GPR37O15354 613 aa12.57□□□□□ -0.4
C9orf135-202ENST00000466872 ANXA1P04083 346 aa12.57□□□□□ -0.4
C9orf135-202ENST00000466872 YBX3P16989 372 aaKnown RBP eCLIP12.57□□□□□ -0.4
C9orf135-202ENST00000466872 PARP3Q9Y6F1 533 aa12.57□□□□□ -0.4
C9orf135-202ENST00000466872 CACNA1FO60840 1977 aa12.57□□□□□ -0.4
C9orf135-202ENST00000466872 LAMB2P55268 1798 aa12.56□□□□□ -0.4
C9orf135-202ENST00000466872 CLEC4GQ6UXB4 293 aa12.56□□□□□ -0.4
C9orf135-202ENST00000466872 TSPYL6Q8N831 410 aa12.56□□□□□ -0.4
C9orf135-202ENST00000466872 C8orf58Q8NAV2 365 aa12.56□□□□□ -0.4
C9orf135-202ENST00000466872 PLSCR2Q9NRY7 297 aa12.56□□□□□ -0.4
C9orf135-202ENST00000466872 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
C9orf135-202ENST00000466872 LAS1LQ9Y4W2 734 aaKnown RBP12.56□□□□□ -0.4
C9orf135-202ENST00000466872 MAP3K15Q6ZN16 1313 aa12.56□□□□□ -0.4
C9orf135-202ENST00000466872 CACNA1SQ13698 1873 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 SERPINB2P05120 415 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 CALD1Q05682 793 aaKnown RBP12.55□□□□□ -0.4
C9orf135-202ENST00000466872 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 PRR5LQ6MZQ0 368 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 PADI6Q6TGC4 694 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
C9orf135-202ENST00000466872 NBPF3Q9H094 633 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 UBN2Q6ZU65 1347 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 FANCIQ9NVI1 1328 aa12.55□□□□□ -0.4
C9orf135-202ENST00000466872 MYL6BP14649 208 aa12.54□□□□□ -0.4
C9orf135-202ENST00000466872 EIF2S2P20042 333 aaKnown RBP12.54□□□□□ -0.4
C9orf135-202ENST00000466872 TGFB2P61812 414 aa12.54□□□□□ -0.4
C9orf135-202ENST00000466872 DIEXFQ68CQ4 756 aaKnown RBP12.54□□□□□ -0.4
C9orf135-202ENST00000466872 WDR63Q8IWG1 891 aa12.54□□□□□ -0.4
C9orf135-202ENST00000466872 DDX21Q9NR30 783 aaKnown RBP eCLIP12.54□□□□□ -0.4
C9orf135-202ENST00000466872 CHPF2Q9P2E5 772 aa12.54□□□□□ -0.4
C9orf135-202ENST00000466872 IBTKQ9P2D0 1353 aaPredicted RBP12.54□□□□□ -0.4
C9orf135-202ENST00000466872 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
C9orf135-202ENST00000466872 RIC1Q4ADV7 1423 aa12.54□□□□□ -0.4
C9orf135-202ENST00000466872 DPEP1P16444 411 aa12.53□□□□□ -0.4
C9orf135-202ENST00000466872 HDGFL1Q5TGJ6 251 aa12.53□□□□□ -0.4
C9orf135-202ENST00000466872 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
C9orf135-202ENST00000466872 MRPL50Q8N5N7 158 aaKnown RBP12.53□□□□□ -0.4
C9orf135-202ENST00000466872 NGEFQ8N5V2 710 aa12.53□□□□□ -0.4
C9orf135-202ENST00000466872 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
C9orf135-202ENST00000466872 SBF1O95248 1867 aa12.53□□□□□ -0.4
C9orf135-202ENST00000466872 A0A0G2JLW4 131 aa12.52□□□□□ -0.41
C9orf135-202ENST00000466872 C3orf80F5H4A9 247 aa12.52□□□□□ -0.41
C9orf135-202ENST00000466872 HIC1Q14526 733 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms